RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 MED14O60244 1454 aa22.91■■□□□ 1.26
CSNK1D-219ENST00000581660 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
CSNK1D-219ENST00000581660 FAM135AQ9P2D6 1515 aa22.89■■□□□ 1.26
CSNK1D-219ENST00000581660 DEPDC5O75140 1603 aa22.89■■□□□ 1.25
CSNK1D-219ENST00000581660 PZPP20742 1482 aa22.88■■□□□ 1.25
CSNK1D-219ENST00000581660 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
CSNK1D-219ENST00000581660 NPHP4O75161 1426 aaPredicted RBP22.86■■□□□ 1.25
CSNK1D-219ENST00000581660 ANKLE2Q86XL3 938 aa22.86■■□□□ 1.25
CSNK1D-219ENST00000581660 RTEL1-TNFRSF6BF6WH68 1400 aa22.84■■□□□ 1.25
CSNK1D-219ENST00000581660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.84■■□□□ 1.252e-11■■■■■ 32.8
CSNK1D-219ENST00000581660 NLRP1Q9C000 1473 aa22.84■■□□□ 1.25
CSNK1D-219ENST00000581660 KDM5DQ9BY66 1539 aa22.83■■□□□ 1.25
CSNK1D-219ENST00000581660 RNF17Q9BXT8 1623 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-219ENST00000581660 FBXO31Q5XUX0 539 aaPredicted RBP22.83■■□□□ 1.25
CSNK1D-219ENST00000581660 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-219ENST00000581660 SYNMO15061 1565 aa22.82■■□□□ 1.24
CSNK1D-219ENST00000581660 MBD5Q9P267 1494 aa22.82■■□□□ 1.24
CSNK1D-219ENST00000581660 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
CSNK1D-219ENST00000581660 THEMISQ8N1K5 641 aaPredicted RBP22.82■■□□□ 1.24
CSNK1D-219ENST00000581660 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
CSNK1D-219ENST00000581660 RGS17Q9UGC6 210 aaPredicted RBP22.81■■□□□ 1.24
CSNK1D-219ENST00000581660 MIA2Q96PC5 1412 aa22.8■■□□□ 1.24
CSNK1D-219ENST00000581660 IQGAP1P46940 1657 aa22.8■■□□□ 1.24
CSNK1D-219ENST00000581660 UGGT1Q9NYU2 1555 aa22.8■■□□□ 1.24
CSNK1D-219ENST00000581660 STRCP1A6NGW2 1772 aa22.79■■□□□ 1.24
CSNK1D-219ENST00000581660 ZNF644Q9H582 1327 aaPredicted RBP22.73■■□□□ 1.23
CSNK1D-219ENST00000581660 TIAM1Q13009 1591 aa22.72■■□□□ 1.23
CSNK1D-219ENST00000581660 KIF3BO15066 747 aa22.72■■□□□ 1.23
CSNK1D-219ENST00000581660 WASHC2CQ9Y4E1 1318 aa22.71■■□□□ 1.23
CSNK1D-219ENST00000581660 ZC3H13Q5T200 1668 aaKnown RBP22.68■■□□□ 1.22
CSNK1D-219ENST00000581660 MTUS2Q5JR59 1369 aa22.68■■□□□ 1.22
CSNK1D-219ENST00000581660 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
CSNK1D-219ENST00000581660 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
CSNK1D-219ENST00000581660 POTEAQ6S8J7 498 aa22.62■■□□□ 1.21
CSNK1D-219ENST00000581660 FAM135BQ49AJ0 1406 aa22.62■■□□□ 1.21
CSNK1D-219ENST00000581660 EHBP1L1Q8N3D4 1523 aa22.62■■□□□ 1.21
CSNK1D-219ENST00000581660 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
CSNK1D-219ENST00000581660 CEP162Q5TB80 1403 aa22.6■■□□□ 1.21
CSNK1D-219ENST00000581660 ABCC3O15438 1527 aa22.6■■□□□ 1.21
CSNK1D-219ENST00000581660 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
CSNK1D-219ENST00000581660 SCAF11Q99590 1463 aaKnown RBP22.59■■□□□ 1.21
CSNK1D-219ENST00000581660 RSPH4AQ5TD94 716 aa22.58■■□□□ 1.21
CSNK1D-219ENST00000581660 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
CSNK1D-219ENST00000581660 CAMSAP2Q08AD1 1489 aa22.56■■□□□ 1.2
CSNK1D-219ENST00000581660 ARHGAP23Q9P227 1491 aa22.56■■□□□ 1.2
CSNK1D-219ENST00000581660 SLIT1O75093 1534 aa22.55■■□□□ 1.2
CSNK1D-219ENST00000581660 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
CSNK1D-219ENST00000581660 ARHGEF5Q12774 1597 aa22.54■■□□□ 1.2
CSNK1D-219ENST00000581660 LTKP29376 864 aa22.49■■□□□ 1.19
CSNK1D-219ENST00000581660 MROH1Q8NDA8 1641 aa22.49■■□□□ 1.19
CSNK1D-219ENST00000581660 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
CSNK1D-219ENST00000581660 SETD1AO15047 1707 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-219ENST00000581660 ROBO1Q9Y6N7 1651 aa22.47■■□□□ 1.19
CSNK1D-219ENST00000581660 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
CSNK1D-219ENST00000581660 TXNDC2Q86VQ3 553 aa22.46■■□□□ 1.19
CSNK1D-219ENST00000581660 LRRC9Q6ZRR7 1453 aa22.45■■□□□ 1.18
CSNK1D-219ENST00000581660 MAST1Q9Y2H9 1570 aa22.45■■□□□ 1.18
CSNK1D-219ENST00000581660 TMEM94Q12767 1356 aa22.44■■□□□ 1.18
CSNK1D-219ENST00000581660 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
CSNK1D-219ENST00000581660 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
CSNK1D-219ENST00000581660 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
CSNK1D-219ENST00000581660 CEP152O94986 1710 aa22.42■■□□□ 1.18
CSNK1D-219ENST00000581660 ARHGAP31Q2M1Z3 1444 aa22.41■■□□□ 1.18
CSNK1D-219ENST00000581660 EID1Q9Y6B2 187 aa22.4■■□□□ 1.18
CSNK1D-219ENST00000581660 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
CSNK1D-219ENST00000581660 CFAP65Q6ZU64 1925 aaKnown RBP22.38■■□□□ 1.17
CSNK1D-219ENST00000581660 KCNA6P17658 529 aa22.37■■□□□ 1.17
CSNK1D-219ENST00000581660 JCADQ9P266 1359 aa22.36■■□□□ 1.17
CSNK1D-219ENST00000581660 PRDM15P57071 1507 aaPredicted RBP22.36■■□□□ 1.17
CSNK1D-219ENST00000581660 KDM5AP29375 1690 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-219ENST00000581660 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
CSNK1D-219ENST00000581660 NKTRP30414 1462 aaKnown RBP22.35■■□□□ 1.17
CSNK1D-219ENST00000581660 NWD1Q149M9 1564 aa22.34■■□□□ 1.17
CSNK1D-219ENST00000581660 TET3O43151 1660 aa22.34■■□□□ 1.17
CSNK1D-219ENST00000581660 UPF1Q92900 1129 aaKnown RBP eCLIP22.33■■□□□ 1.174e-6■□□□□ 10.4
CSNK1D-219ENST00000581660 PHLPP1O60346 1717 aa22.33■■□□□ 1.17
CSNK1D-219ENST00000581660 DUOX2Q9NRD8 1548 aa22.31■■□□□ 1.16
CSNK1D-219ENST00000581660 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
CSNK1D-219ENST00000581660 EFCAB6Q5THR3 1501 aa22.3■■□□□ 1.16
CSNK1D-219ENST00000581660 COL16A1Q07092 1604 aaPredicted RBP22.29■■□□□ 1.16
CSNK1D-219ENST00000581660 MSH6P52701 1360 aa22.28■■□□□ 1.16
CSNK1D-219ENST00000581660 SLAIN2Q9P270 581 aa22.27■■□□□ 1.16
CSNK1D-219ENST00000581660 LRP6O75581 1613 aa22.27■■□□□ 1.16
CSNK1D-219ENST00000581660 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
CSNK1D-219ENST00000581660 RBM33Q96EV2 1170 aaKnown RBP22.26■■□□□ 1.15
CSNK1D-219ENST00000581660 SPATA31A6Q5VVP1 1343 aa22.25■■□□□ 1.15
CSNK1D-219ENST00000581660 ZNF772Q68DY9 489 aaPredicted RBP22.24■■□□□ 1.15
CSNK1D-219ENST00000581660 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
CSNK1D-219ENST00000581660 SRCAPQ6ZRS2 3230 aa22.24■■□□□ 1.15
CSNK1D-219ENST00000581660 ERBINQ96RT1 1412 aa22.23■■□□□ 1.15
CSNK1D-219ENST00000581660 STAG3Q9UJ98 1225 aa22.21■■□□□ 1.15
CSNK1D-219ENST00000581660 IDI1Q13907 227 aa22.2■■□□□ 1.14
CSNK1D-219ENST00000581660 CDK12Q9NYV4 1490 aaPredicted RBP22.2■■□□□ 1.14
CSNK1D-219ENST00000581660 KIF15Q9NS87 1388 aa22.19■■□□□ 1.14
CSNK1D-219ENST00000581660 ADGRB3O60242 1522 aa22.19■■□□□ 1.14
CSNK1D-219ENST00000581660 LMTK2Q8IWU2 1503 aa22.19■■□□□ 1.14
CSNK1D-219ENST00000581660 MYOM3Q5VTT5 1437 aa22.18■■□□□ 1.14
CSNK1D-219ENST00000581660 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
CSNK1D-219ENST00000581660 SHPRHQ149N8 1683 aa22.17■■□□□ 1.14
CSNK1D-219ENST00000581660 AHDC1Q5TGY3 1603 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms