RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 ZNF330Q9Y3S2 320 aaPredicted RBP12.28□□□□□ -0.44
SUPT4H1-207ENST00000581540 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
SUPT4H1-207ENST00000581540 HMGB1P09429 215 aaKnown RBP12.27□□□□□ -0.45
SUPT4H1-207ENST00000581540 WWC1Q8IX03 1113 aa12.26□□□□□ -0.45
SUPT4H1-207ENST00000581540 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
SUPT4H1-207ENST00000581540 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
SUPT4H1-207ENST00000581540 CLCN1P35523 988 aa12.25□□□□□ -0.45
SUPT4H1-207ENST00000581540 FECHP22830 423 aa12.24□□□□□ -0.45
SUPT4H1-207ENST00000581540 DSG2Q14126 1118 aa12.24□□□□□ -0.45
SUPT4H1-207ENST00000581540 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
SUPT4H1-207ENST00000581540 OXER1Q8TDS5 423 aa12.24□□□□□ -0.45
SUPT4H1-207ENST00000581540 SMARCA4P51532 1647 aa12.22□□□□□ -0.45
SUPT4H1-207ENST00000581540 OSBPP22059 807 aa12.22□□□□□ -0.45
SUPT4H1-207ENST00000581540 KCNA1Q09470 495 aa12.22□□□□□ -0.45
SUPT4H1-207ENST00000581540 BANK1Q8NDB2 785 aa12.21□□□□□ -0.45
SUPT4H1-207ENST00000581540 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
SUPT4H1-207ENST00000581540 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
SUPT4H1-207ENST00000581540 FOXK1P85037 733 aa12.2□□□□□ -0.46
SUPT4H1-207ENST00000581540 TMC2Q8TDI7 906 aa12.2□□□□□ -0.46
SUPT4H1-207ENST00000581540 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
SUPT4H1-207ENST00000581540 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
SUPT4H1-207ENST00000581540 ZNF428Q96B54 188 aa12.19□□□□□ -0.46
SUPT4H1-207ENST00000581540 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
SUPT4H1-207ENST00000581540 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
SUPT4H1-207ENST00000581540 PEG3Q9GZU2 1588 aa12.17□□□□□ -0.46
SUPT4H1-207ENST00000581540 BRD1O95696 1058 aa12.16□□□□□ -0.46
SUPT4H1-207ENST00000581540 PTGDRQ13258 359 aa12.16□□□□□ -0.46
SUPT4H1-207ENST00000581540 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
SUPT4H1-207ENST00000581540 CALR3Q96L12 384 aaKnown RBP12.15□□□□□ -0.46
SUPT4H1-207ENST00000581540 PTGER2P43116 358 aa12.14□□□□□ -0.47
SUPT4H1-207ENST00000581540 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
SUPT4H1-207ENST00000581540 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
SUPT4H1-207ENST00000581540 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
SUPT4H1-207ENST00000581540 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
SUPT4H1-207ENST00000581540 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
SUPT4H1-207ENST00000581540 PRM3Q9NNZ6 103 aa12.13□□□□□ -0.47
SUPT4H1-207ENST00000581540 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
SUPT4H1-207ENST00000581540 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
SUPT4H1-207ENST00000581540 TMEM106CQ9BVX2 250 aa12.12□□□□□ -0.47
SUPT4H1-207ENST00000581540 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
SUPT4H1-207ENST00000581540 MDM2Q00987 491 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-207ENST00000581540 TMEM259Q4ZIN3 620 aa12.1□□□□□ -0.47
SUPT4H1-207ENST00000581540 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
SUPT4H1-207ENST00000581540 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
SUPT4H1-207ENST00000581540 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-207ENST00000581540 WDR62O43379 1518 aa12.09□□□□□ -0.47
SUPT4H1-207ENST00000581540 TBC1D12O60347 775 aa12.08□□□□□ -0.48
SUPT4H1-207ENST00000581540 RFC5P40937 340 aa12.08□□□□□ -0.48
SUPT4H1-207ENST00000581540 PBXIP1Q96AQ6 731 aa12.08□□□□□ -0.48
SUPT4H1-207ENST00000581540 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
SUPT4H1-207ENST00000581540 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
SUPT4H1-207ENST00000581540 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
SUPT4H1-207ENST00000581540 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
SUPT4H1-207ENST00000581540 CCDC27Q2M243 656 aa12.07□□□□□ -0.48
SUPT4H1-207ENST00000581540 DDX12PQ92771 950 aa12.07□□□□□ -0.48
SUPT4H1-207ENST00000581540 GLMNQ92990 594 aa12.06□□□□□ -0.48
SUPT4H1-207ENST00000581540 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
SUPT4H1-207ENST00000581540 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
SUPT4H1-207ENST00000581540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.487e-8■■□□□ 12.6
SUPT4H1-207ENST00000581540 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
SUPT4H1-207ENST00000581540 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
SUPT4H1-207ENST00000581540 GDPD2Q9HCC8 539 aa12.04□□□□□ -0.48
SUPT4H1-207ENST00000581540 SOCS7O14512 581 aa12.03□□□□□ -0.48
SUPT4H1-207ENST00000581540 CDK11BP21127 795 aaKnown RBP12.03□□□□□ -0.48
SUPT4H1-207ENST00000581540 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
SUPT4H1-207ENST00000581540 CDK11AQ9UQ88 783 aaPredicted RBP12.03□□□□□ -0.48
SUPT4H1-207ENST00000581540 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
SUPT4H1-207ENST00000581540 PRKAR2AP13861 404 aaKnown RBP12.01□□□□□ -0.49
SUPT4H1-207ENST00000581540 MICALL2Q8IY33 904 aa12□□□□□ -0.49
SUPT4H1-207ENST00000581540 ABL2P42684 1182 aa11.99□□□□□ -0.49
SUPT4H1-207ENST00000581540 PUS7Q96PZ0 661 aaKnown RBP11.99□□□□□ -0.49
SUPT4H1-207ENST00000581540 USP35Q9P2H5 1018 aa11.99□□□□□ -0.49
SUPT4H1-207ENST00000581540 SND1Q7KZF4 910 aaKnown RBP eCLIP11.98□□□□□ -0.496e-6■□□□□ 9.2
SUPT4H1-207ENST00000581540 MTMR14Q8NCE2 650 aa11.98□□□□□ -0.49
SUPT4H1-207ENST00000581540 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
SUPT4H1-207ENST00000581540 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.495e-10■□□□□ 11.1
SUPT4H1-207ENST00000581540 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
SUPT4H1-207ENST00000581540 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
SUPT4H1-207ENST00000581540 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
SUPT4H1-207ENST00000581540 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
SUPT4H1-207ENST00000581540 CACNB1Q02641 598 aaPredicted RBP11.94□□□□□ -0.5
SUPT4H1-207ENST00000581540 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
SUPT4H1-207ENST00000581540 IVNS1ABPQ9Y6Y0 642 aa11.94□□□□□ -0.5
SUPT4H1-207ENST00000581540 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
SUPT4H1-207ENST00000581540 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
SUPT4H1-207ENST00000581540 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
SUPT4H1-207ENST00000581540 C2orf72A6NCS6 295 aa11.93□□□□□ -0.5
SUPT4H1-207ENST00000581540 POM121CA8CG34 1229 aa11.93□□□□□ -0.5
SUPT4H1-207ENST00000581540 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
SUPT4H1-207ENST00000581540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.91□□□□□ -0.5
SUPT4H1-207ENST00000581540 KIF3CO14782 793 aa11.91□□□□□ -0.5
SUPT4H1-207ENST00000581540 EVI5O60447 810 aa11.91□□□□□ -0.5
SUPT4H1-207ENST00000581540 OATP04181 439 aa11.91□□□□□ -0.5
SUPT4H1-207ENST00000581540 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
SUPT4H1-207ENST00000581540 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
SUPT4H1-207ENST00000581540 RFX1P22670 979 aa11.88□□□□□ -0.51
SUPT4H1-207ENST00000581540 MYT1Q01538 1121 aa11.88□□□□□ -0.51
SUPT4H1-207ENST00000581540 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
SUPT4H1-207ENST00000581540 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
SUPT4H1-207ENST00000581540 METTL3Q86U44 580 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms