RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 ZNF777Q9ULD5 760 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-213ENST00000579609 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.41
PPP4R1-213ENST00000579609 EFCAB2Q5VUJ9 269 aa12.51□□□□□ -0.41
PPP4R1-213ENST00000579609 EIF2AK4Q9P2K8 1649 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-213ENST00000579609 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
PPP4R1-213ENST00000579609 DEPDC5O75140 1603 aa12.49□□□□□ -0.41
PPP4R1-213ENST00000579609 NUP155O75694 1391 aa12.49□□□□□ -0.41
PPP4R1-213ENST00000579609 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
PPP4R1-213ENST00000579609 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
PPP4R1-213ENST00000579609 INO80Q9ULG1 1556 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-213ENST00000579609 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-213ENST00000579609 EIF4G2P78344 907 aaKnown RBP eCLIP12.48□□□□□ -0.41
PPP4R1-213ENST00000579609 L3MBTL2Q969R5 705 aa12.48□□□□□ -0.41
PPP4R1-213ENST00000579609 LAMC1P11047 1609 aa12.48□□□□□ -0.41
PPP4R1-213ENST00000579609 NEURL4Q96JN8 1562 aa12.47□□□□□ -0.41
PPP4R1-213ENST00000579609 RALGAPBQ86X10 1494 aa12.47□□□□□ -0.41
PPP4R1-213ENST00000579609 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-213ENST00000579609 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
PPP4R1-213ENST00000579609 SPATA31E1Q6ZUB1 1445 aa12.46□□□□□ -0.41
PPP4R1-213ENST00000579609 HNRNPMP52272 730 aaKnown RBP eCLIP12.45□□□□□ -0.422e-7■■■■□ 24.6
PPP4R1-213ENST00000579609 PKD2Q13563 968 aa12.45□□□□□ -0.42
PPP4R1-213ENST00000579609 KDM5CP41229 1560 aa12.43□□□□□ -0.42
PPP4R1-213ENST00000579609 BCORL1Q5H9F3 1711 aa12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 FANCAO15360 1455 aa12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 VWDEQ8N2E2 1590 aa12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 TET3O43151 1660 aa12.42□□□□□ -0.42
PPP4R1-213ENST00000579609 ANP32CO43423 234 aa12.41□□□□□ -0.42
PPP4R1-213ENST00000579609 CNTLNQ9NXG0 1405 aa12.41□□□□□ -0.42
PPP4R1-213ENST00000579609 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.42
PPP4R1-213ENST00000579609 ASXL2Q76L83 1435 aa12.4□□□□□ -0.42
PPP4R1-213ENST00000579609 PRDM15P57071 1507 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-213ENST00000579609 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-213ENST00000579609 DDX10Q13206 875 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-213ENST00000579609 ROCK2O75116 1388 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-213ENST00000579609 TRPM1Q7Z4N2 1603 aa12.38□□□□□ -0.43
PPP4R1-213ENST00000579609 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
PPP4R1-213ENST00000579609 ADGRL1O94910 1474 aa12.38□□□□□ -0.43
PPP4R1-213ENST00000579609 ZNF518AQ6AHZ1 1483 aa12.38□□□□□ -0.43
PPP4R1-213ENST00000579609 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
PPP4R1-213ENST00000579609 TRPM2O94759 1503 aa12.37□□□□□ -0.43
PPP4R1-213ENST00000579609 CEP152O94986 1710 aa12.37□□□□□ -0.43
PPP4R1-213ENST00000579609 SPHKAPQ2M3C7 1700 aa12.37□□□□□ -0.43
PPP4R1-213ENST00000579609 RNF17Q9BXT8 1623 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-213ENST00000579609 SPAG9O60271 1321 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-213ENST00000579609 NEO1Q92859 1461 aa12.36□□□□□ -0.43
PPP4R1-213ENST00000579609 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
PPP4R1-213ENST00000579609 NBPF8Q3BBV2 869 aa12.36□□□□□ -0.43
PPP4R1-213ENST00000579609 LMTK2Q8IWU2 1503 aa12.36□□□□□ -0.43
PPP4R1-213ENST00000579609 WASHC2AQ641Q2 1341 aa12.36□□□□□ -0.43
PPP4R1-213ENST00000579609 CAPN15O75808 1086 aa12.35□□□□□ -0.43
PPP4R1-213ENST00000579609 PTPRTO14522 1441 aa12.35□□□□□ -0.43
PPP4R1-213ENST00000579609 E9PCH4 1651 aa12.35□□□□□ -0.43
PPP4R1-213ENST00000579609 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 GLI2P10070 1586 aa12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 KIAA1210Q9ULL0 1709 aa12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
PPP4R1-213ENST00000579609 KIDINS220Q9ULH0 1771 aa12.33□□□□□ -0.44
PPP4R1-213ENST00000579609 KANK1Q14678 1352 aa12.33□□□□□ -0.44
PPP4R1-213ENST00000579609 PRAG1Q86YV5 1406 aa12.33□□□□□ -0.44
PPP4R1-213ENST00000579609 DHX29Q7Z478 1369 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-213ENST00000579609 USP47Q96K76 1375 aa12.32□□□□□ -0.44
PPP4R1-213ENST00000579609 KTN1Q86UP2 1357 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-213ENST00000579609 HECW2Q9P2P5 1572 aa12.31□□□□□ -0.44
PPP4R1-213ENST00000579609 SCAPERQ9BY12 1400 aa12.31□□□□□ -0.44
PPP4R1-213ENST00000579609 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
PPP4R1-213ENST00000579609 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-213ENST00000579609 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
PPP4R1-213ENST00000579609 POGZQ7Z3K3 1410 aa12.3□□□□□ -0.44
PPP4R1-213ENST00000579609 POLA2Q14181 598 aa12.3□□□□□ -0.44
PPP4R1-213ENST00000579609 YTHDC1Q96MU7 727 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-213ENST00000579609 A2MP01023 1474 aa12.29□□□□□ -0.44
PPP4R1-213ENST00000579609 EFCAB6Q5THR3 1501 aa12.29□□□□□ -0.44
PPP4R1-213ENST00000579609 MAP3K4Q9Y6R4 1608 aa12.29□□□□□ -0.44
PPP4R1-213ENST00000579609 ZC3H13Q5T200 1668 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-213ENST00000579609 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
PPP4R1-213ENST00000579609 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.45
PPP4R1-213ENST00000579609 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-213ENST00000579609 MADDQ8WXG6 1647 aa12.26□□□□□ -0.45
PPP4R1-213ENST00000579609 KIF1BO60333 1816 aa12.25□□□□□ -0.45
PPP4R1-213ENST00000579609 MYOM2P54296 1465 aa12.25□□□□□ -0.45
PPP4R1-213ENST00000579609 CLTCL1P53675 1640 aa12.25□□□□□ -0.45
PPP4R1-213ENST00000579609 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
PPP4R1-213ENST00000579609 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
PPP4R1-213ENST00000579609 IFT172Q9UG01 1749 aa12.24□□□□□ -0.45
PPP4R1-213ENST00000579609 RICTORQ6R327 1708 aa12.23□□□□□ -0.45
PPP4R1-213ENST00000579609 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
PPP4R1-213ENST00000579609 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
PPP4R1-213ENST00000579609 CARD11Q9BXL7 1154 aa12.23□□□□□ -0.45
PPP4R1-213ENST00000579609 ZMYM4Q5VZL5 1548 aa12.22□□□□□ -0.45
PPP4R1-213ENST00000579609 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
PPP4R1-213ENST00000579609 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
PPP4R1-213ENST00000579609 DCAF11Q8TEB1 546 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms