RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 MYO3AQ8NEV4 1616 aa27.36■■□□□ 1.97
SLC9A3R1-203ENST00000578958 FAM135AQ9P2D6 1515 aa27.34■■□□□ 1.97
SLC9A3R1-203ENST00000578958 NCKAP5LQ9HCH0 1330 aa27.34■■□□□ 1.97
SLC9A3R1-203ENST00000578958 MAST1Q9Y2H9 1570 aa27.34■■□□□ 1.97
SLC9A3R1-203ENST00000578958 CEP170BQ9Y4F5 1589 aaPredicted RBP27.33■■□□□ 1.97
SLC9A3R1-203ENST00000578958 PKD2Q13563 968 aa27.32■■□□□ 1.96
SLC9A3R1-203ENST00000578958 FBXO31Q5XUX0 539 aaPredicted RBP27.32■■□□□ 1.96
SLC9A3R1-203ENST00000578958 TNRQ92752 1358 aa27.31■■□□□ 1.96
SLC9A3R1-203ENST00000578958 ZNF142P52746 1687 aaPredicted RBP27.3■■□□□ 1.96
SLC9A3R1-203ENST00000578958 PZPP20742 1482 aa27.29■■□□□ 1.96
SLC9A3R1-203ENST00000578958 A2ML1A8K2U0 1454 aa27.27■■□□□ 1.96
SLC9A3R1-203ENST00000578958 PLA2R1Q13018 1463 aa27.27■■□□□ 1.96
SLC9A3R1-203ENST00000578958 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
SLC9A3R1-203ENST00000578958 RRP7BPQ9NSQ0 103 aa27.24■■□□□ 1.95
SLC9A3R1-203ENST00000578958 DUOX2Q9NRD8 1548 aa27.23■■□□□ 1.95
SLC9A3R1-203ENST00000578958 FGD6Q6ZV73 1430 aa27.23■■□□□ 1.95
SLC9A3R1-203ENST00000578958 KIF15Q9NS87 1388 aa27.22■■□□□ 1.95
SLC9A3R1-203ENST00000578958 EIF2AK4Q9P2K8 1649 aaKnown RBP27.22■■□□□ 1.95
SLC9A3R1-203ENST00000578958 ABCC5O15440 1437 aa27.22■■□□□ 1.95
SLC9A3R1-203ENST00000578958 RNF17Q9BXT8 1623 aaKnown RBP27.21■■□□□ 1.95
SLC9A3R1-203ENST00000578958 DNMT1P26358 1616 aaKnown RBP27.19■■□□□ 1.94
SLC9A3R1-203ENST00000578958 SHANK2Q9UPX8 1470 aa27.19■■□□□ 1.94
SLC9A3R1-203ENST00000578958 THEMISQ8N1K5 641 aaPredicted RBP27.19■■□□□ 1.94
SLC9A3R1-203ENST00000578958 TCOF1Q13428 1488 aaKnown RBP27.19■■□□□ 1.94
SLC9A3R1-203ENST00000578958 DAPK1P53355 1430 aa27.18■■□□□ 1.94
SLC9A3R1-203ENST00000578958 ABCC3O15438 1527 aa27.17■■□□□ 1.94
SLC9A3R1-203ENST00000578958 CHIC2Q9UKJ5 165 aa27.17■■□□□ 1.94
SLC9A3R1-203ENST00000578958 ZC3H13Q5T200 1668 aaKnown RBP27.17■■□□□ 1.94
SLC9A3R1-203ENST00000578958 NLRP1Q9C000 1473 aa27.16■■□□□ 1.94
SLC9A3R1-203ENST00000578958 ANKLE2Q86XL3 938 aa27.15■■□□□ 1.94
SLC9A3R1-203ENST00000578958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.15■■□□□ 1.94
SLC9A3R1-203ENST00000578958 LTBP4Q8N2S1 1624 aa27.15■■□□□ 1.94
SLC9A3R1-203ENST00000578958 ZNF335Q9H4Z2 1342 aaPredicted RBP27.15■■□□□ 1.94
SLC9A3R1-203ENST00000578958 CROCC2H7BZ55 1655 aa27.14■■□□□ 1.94
SLC9A3R1-203ENST00000578958 ANKRD30AQ9BXX3 1397 aa27.14■■□□□ 1.94
SLC9A3R1-203ENST00000578958 FAM50AQ14320 339 aaKnown RBP27.14■■□□□ 1.94
SLC9A3R1-203ENST00000578958 ERBINQ96RT1 1412 aa27.14■■□□□ 1.93
SLC9A3R1-203ENST00000578958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.11■■□□□ 1.93
SLC9A3R1-203ENST00000578958 KANK1Q14678 1352 aa27.1■■□□□ 1.93
SLC9A3R1-203ENST00000578958 UGGT1Q9NYU2 1555 aa27.1■■□□□ 1.93
SLC9A3R1-203ENST00000578958 IQSEC2Q5JU85 1478 aa27.08■■□□□ 1.93
SLC9A3R1-203ENST00000578958 MROH1Q8NDA8 1641 aa27.08■■□□□ 1.93
SLC9A3R1-203ENST00000578958 ERVK-7P63135 1459 aa27.07■■□□□ 1.92
SLC9A3R1-203ENST00000578958 CEP152O94986 1710 aa27.07■■□□□ 1.92
SLC9A3R1-203ENST00000578958 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
SLC9A3R1-203ENST00000578958 POLR1AO95602 1720 aaPredicted RBP27.04■■□□□ 1.92
SLC9A3R1-203ENST00000578958 PRDM15P57071 1507 aaPredicted RBP27.03■■□□□ 1.92
SLC9A3R1-203ENST00000578958 CFAP65Q6ZU64 1925 aaKnown RBP27.01■■□□□ 1.91
SLC9A3R1-203ENST00000578958 UBAP1LF5GYI3 381 aa27■■□□□ 1.91
SLC9A3R1-203ENST00000578958 ARHGAP31Q2M1Z3 1444 aa26.99■■□□□ 1.91
SLC9A3R1-203ENST00000578958 NEURL4Q96JN8 1562 aa26.98■■□□□ 1.91
SLC9A3R1-203ENST00000578958 NPHP4O75161 1426 aaPredicted RBP26.98■■□□□ 1.91
SLC9A3R1-203ENST00000578958 STAG3Q9UJ98 1225 aa26.97■■□□□ 1.91
SLC9A3R1-203ENST00000578958 DEPDC5O75140 1603 aa26.95■■□□□ 1.91
SLC9A3R1-203ENST00000578958 ADGRL2O95490 1459 aa26.94■■□□□ 1.9
SLC9A3R1-203ENST00000578958 MED14O60244 1454 aa26.93■■□□□ 1.9
SLC9A3R1-203ENST00000578958 CPS1P31327 1500 aa26.91■■□□□ 1.9
SLC9A3R1-203ENST00000578958 EID1Q9Y6B2 187 aa26.91■■□□□ 1.9
SLC9A3R1-203ENST00000578958 ANKRD50Q9ULJ7 1429 aa26.9■■□□□ 1.9
SLC9A3R1-203ENST00000578958 TXNDC2Q86VQ3 553 aa26.89■■□□□ 1.9
SLC9A3R1-203ENST00000578958 PPARGC1BQ86YN6 1023 aaKnown RBP26.88■■□□□ 1.89
SLC9A3R1-203ENST00000578958 LMTK2Q8IWU2 1503 aa26.88■■□□□ 1.89
SLC9A3R1-203ENST00000578958 IQGAP1P46940 1657 aa26.88■■□□□ 1.89
SLC9A3R1-203ENST00000578958 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
SLC9A3R1-203ENST00000578958 UBR1Q8IWV7 1749 aa26.87■■□□□ 1.89
SLC9A3R1-203ENST00000578958 TOM1O60784 492 aa26.85■■□□□ 1.89
SLC9A3R1-203ENST00000578958 ITGAEP38570 1179 aa26.85■■□□□ 1.89
SLC9A3R1-203ENST00000578958 SCAF11Q99590 1463 aaKnown RBP26.85■■□□□ 1.89
SLC9A3R1-203ENST00000578958 VWDEQ8N2E2 1590 aa26.84■■□□□ 1.89
SLC9A3R1-203ENST00000578958 IDI1Q13907 227 aa26.83■■□□□ 1.89
SLC9A3R1-203ENST00000578958 LTKP29376 864 aa26.82■■□□□ 1.88
SLC9A3R1-203ENST00000578958 PIP4K2BP78356 416 aa26.82■■□□□ 1.88
SLC9A3R1-203ENST00000578958 DISP3Q9P2K9 1392 aa26.82■■□□□ 1.88
SLC9A3R1-203ENST00000578958 EFCAB6Q5THR3 1501 aa26.8■■□□□ 1.88
SLC9A3R1-203ENST00000578958 PIK3C2BO00750 1634 aa26.8■■□□□ 1.88
SLC9A3R1-203ENST00000578958 SLIT1O75093 1534 aa26.8■■□□□ 1.88
SLC9A3R1-203ENST00000578958 SLC52A1Q9NWF4 448 aa26.79■■□□□ 1.88
SLC9A3R1-203ENST00000578958 ARHGAP23Q9P227 1491 aa26.79■■□□□ 1.88
SLC9A3R1-203ENST00000578958 TMEM2Q9UHN6 1383 aa26.78■■□□□ 1.88
SLC9A3R1-203ENST00000578958 ROCK1Q13464 1354 aa26.77■■□□□ 1.88
SLC9A3R1-203ENST00000578958 NOS1P29475 1434 aa26.75■■□□□ 1.87
SLC9A3R1-203ENST00000578958 RPRD2Q5VT52 1461 aaKnown RBP26.74■■□□□ 1.87
SLC9A3R1-203ENST00000578958 BCANQ96GW7 911 aa26.73■■□□□ 1.87
SLC9A3R1-203ENST00000578958 SYNMO15061 1565 aa26.72■■□□□ 1.87
SLC9A3R1-203ENST00000578958 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.87
SLC9A3R1-203ENST00000578958 TET3O43151 1660 aa26.7■■□□□ 1.86
SLC9A3R1-203ENST00000578958 ADGRB3O60242 1522 aa26.68■■□□□ 1.86
SLC9A3R1-203ENST00000578958 LRRC7Q96NW7 1537 aa26.68■■□□□ 1.86
SLC9A3R1-203ENST00000578958 CHGAP10645 457 aaKnown RBP26.67■■□□□ 1.86
SLC9A3R1-203ENST00000578958 HDGFP51858 240 aaKnown RBP26.67■■□□□ 1.86
SLC9A3R1-203ENST00000578958 UNC13BO14795 1591 aa26.67■■□□□ 1.86
SLC9A3R1-203ENST00000578958 NUP155O75694 1391 aa26.66■■□□□ 1.86
SLC9A3R1-203ENST00000578958 PPP1R15AO75807 674 aaPredicted RBP26.65■■□□□ 1.86
SLC9A3R1-203ENST00000578958 HSPA1LP34931 641 aa26.65■■□□□ 1.86
SLC9A3R1-203ENST00000578958 STRCP1A6NGW2 1772 aa26.64■■□□□ 1.86
SLC9A3R1-203ENST00000578958 SLC26A8Q96RN1 970 aa26.64■■□□□ 1.86
SLC9A3R1-203ENST00000578958 GCC2Q8IWJ2 1684 aa26.63■■□□□ 1.85
SLC9A3R1-203ENST00000578958 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
SLC9A3R1-203ENST00000578958 KCNA6P17658 529 aa26.58■■□□□ 1.85
SLC9A3R1-203ENST00000578958 IQGAP3Q86VI3 1631 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms