RNA–Protein interactions for RNA: ENST00000578649.1

UBB-207, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 477 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-207ENST00000578649 MAST1Q9Y2H9 1570 aa20.21■□□□□ 0.83
UBB-207ENST00000578649 ZNF142P52746 1687 aaPredicted RBP20.2■□□□□ 0.82
UBB-207ENST00000578649 APLP2Q06481 763 aa20.2■□□□□ 0.82
UBB-207ENST00000578649 FBXO31Q5XUX0 539 aaPredicted RBP20.2■□□□□ 0.82
UBB-207ENST00000578649 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
UBB-207ENST00000578649 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
UBB-207ENST00000578649 WASHC2CQ9Y4E1 1318 aa20.2■□□□□ 0.82
UBB-207ENST00000578649 CEP170BQ9Y4F5 1589 aaPredicted RBP20.2■□□□□ 0.82
UBB-207ENST00000578649 FAM135AQ9P2D6 1515 aa20.17■□□□□ 0.82
UBB-207ENST00000578649 PZPP20742 1482 aa20.16■□□□□ 0.82
UBB-207ENST00000578649 PLA2R1Q13018 1463 aa20.15■□□□□ 0.82
UBB-207ENST00000578649 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.81
UBB-207ENST00000578649 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
UBB-207ENST00000578649 TNRQ92752 1358 aa20.14■□□□□ 0.81
UBB-207ENST00000578649 PKD2Q13563 968 aa20.14■□□□□ 0.81
UBB-207ENST00000578649 TCOF1Q13428 1488 aaKnown RBP20.13■□□□□ 0.81
UBB-207ENST00000578649 DNMT1P26358 1616 aaKnown RBP20.13■□□□□ 0.81
UBB-207ENST00000578649 RNF17Q9BXT8 1623 aaKnown RBP20.13■□□□□ 0.81
UBB-207ENST00000578649 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
UBB-207ENST00000578649 ABCC5O15440 1437 aa20.11■□□□□ 0.81
UBB-207ENST00000578649 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
UBB-207ENST00000578649 EIF2AK4Q9P2K8 1649 aaKnown RBP20.09■□□□□ 0.81
UBB-207ENST00000578649 ABCC3O15438 1527 aa20.09■□□□□ 0.81
UBB-207ENST00000578649 ZNF335Q9H4Z2 1342 aaPredicted RBP20.08■□□□□ 0.81
UBB-207ENST00000578649 DUOX2Q9NRD8 1548 aa20.08■□□□□ 0.81
UBB-207ENST00000578649 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
UBB-207ENST00000578649 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
UBB-207ENST00000578649 SHANK2Q9UPX8 1470 aa20.07■□□□□ 0.8
UBB-207ENST00000578649 DAPK1P53355 1430 aa20.07■□□□□ 0.8
UBB-207ENST00000578649 KIF15Q9NS87 1388 aa20.07■□□□□ 0.8
UBB-207ENST00000578649 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
UBB-207ENST00000578649 ZC3H13Q5T200 1668 aaKnown RBP20.05■□□□□ 0.8
UBB-207ENST00000578649 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
UBB-207ENST00000578649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.87e-45■■■□□ 14.9
UBB-207ENST00000578649 FOXD1Q16676 465 aa20.02■□□□□ 0.8
UBB-207ENST00000578649 THEMISQ8N1K5 641 aaPredicted RBP20.02■□□□□ 0.8
UBB-207ENST00000578649 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.8
UBB-207ENST00000578649 ERBINQ96RT1 1412 aa20.02■□□□□ 0.79
UBB-207ENST00000578649 SPATA31D1Q6ZQQ2 1576 aa20.01■□□□□ 0.79
UBB-207ENST00000578649 UGGT1Q9NYU2 1555 aa20.01■□□□□ 0.79
UBB-207ENST00000578649 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
UBB-207ENST00000578649 CEP152O94986 1710 aa20.01■□□□□ 0.79
UBB-207ENST00000578649 NEURL4Q96JN8 1562 aa20■□□□□ 0.79
UBB-207ENST00000578649 ERVK-7P63135 1459 aa20■□□□□ 0.79
UBB-207ENST00000578649 PRDM15P57071 1507 aaPredicted RBP19.99■□□□□ 0.79
UBB-207ENST00000578649 ANKLE2Q86XL3 938 aa19.99■□□□□ 0.79
UBB-207ENST00000578649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.98■□□□□ 0.791e-11■□□□□ 10.5
UBB-207ENST00000578649 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
UBB-207ENST00000578649 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
UBB-207ENST00000578649 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
UBB-207ENST00000578649 ARHGAP31Q2M1Z3 1444 aa19.94■□□□□ 0.78
UBB-207ENST00000578649 DEPDC5O75140 1603 aa19.94■□□□□ 0.78
UBB-207ENST00000578649 CFAP65Q6ZU64 1925 aaKnown RBP19.93■□□□□ 0.78
UBB-207ENST00000578649 MED14O60244 1454 aa19.92■□□□□ 0.78
UBB-207ENST00000578649 NPHP4O75161 1426 aaPredicted RBP19.92■□□□□ 0.78
UBB-207ENST00000578649 KANK1Q14678 1352 aa19.91■□□□□ 0.78
UBB-207ENST00000578649 ADGRL2O95490 1459 aa19.91■□□□□ 0.78
UBB-207ENST00000578649 UBAP1LF5GYI3 381 aa19.9■□□□□ 0.78
UBB-207ENST00000578649 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
UBB-207ENST00000578649 VWDEQ8N2E2 1590 aa19.88■□□□□ 0.77
UBB-207ENST00000578649 LMTK2Q8IWU2 1503 aa19.87■□□□□ 0.77
UBB-207ENST00000578649 IQGAP1P46940 1657 aa19.86■□□□□ 0.77
UBB-207ENST00000578649 CPS1P31327 1500 aa19.86■□□□□ 0.77
UBB-207ENST00000578649 LTKP29376 864 aa19.84■□□□□ 0.77
UBB-207ENST00000578649 ANKRD50Q9ULJ7 1429 aa19.84■□□□□ 0.77
UBB-207ENST00000578649 ARHGAP23Q9P227 1491 aa19.83■□□□□ 0.76
UBB-207ENST00000578649 SLIT1O75093 1534 aa19.82■□□□□ 0.76
UBB-207ENST00000578649 SCAF11Q99590 1463 aaKnown RBP19.82■□□□□ 0.76
UBB-207ENST00000578649 TXNDC2Q86VQ3 553 aa19.82■□□□□ 0.76
UBB-207ENST00000578649 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
UBB-207ENST00000578649 PIK3C2BO00750 1634 aa19.82■□□□□ 0.76
UBB-207ENST00000578649 IDI1Q13907 227 aa19.81■□□□□ 0.76
UBB-207ENST00000578649 EFCAB6Q5THR3 1501 aa19.81■□□□□ 0.76
UBB-207ENST00000578649 SYNMO15061 1565 aa19.78■□□□□ 0.76
UBB-207ENST00000578649 NOS1P29475 1434 aa19.78■□□□□ 0.76
UBB-207ENST00000578649 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
UBB-207ENST00000578649 DISP3Q9P2K9 1392 aa19.78■□□□□ 0.76
UBB-207ENST00000578649 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
UBB-207ENST00000578649 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
UBB-207ENST00000578649 EID1Q9Y6B2 187 aa19.77■□□□□ 0.76
UBB-207ENST00000578649 TOM1O60784 492 aa19.76■□□□□ 0.75
UBB-207ENST00000578649 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
UBB-207ENST00000578649 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
UBB-207ENST00000578649 LRRC7Q96NW7 1537 aa19.75■□□□□ 0.75
UBB-207ENST00000578649 ROCK1Q13464 1354 aa19.74■□□□□ 0.75
UBB-207ENST00000578649 ITGAEP38570 1179 aa19.74■□□□□ 0.75
UBB-207ENST00000578649 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
UBB-207ENST00000578649 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
UBB-207ENST00000578649 SLC52A1Q9NWF4 448 aa19.72■□□□□ 0.75
UBB-207ENST00000578649 ALKQ9UM73 1620 aa19.72■□□□□ 0.75
UBB-207ENST00000578649 UNC13BO14795 1591 aa19.71■□□□□ 0.75
UBB-207ENST00000578649 TET3O43151 1660 aa19.71■□□□□ 0.75
UBB-207ENST00000578649 HSPA1LP34931 641 aa19.7■□□□□ 0.74
UBB-207ENST00000578649 ILDR2Q71H61 639 aa19.7■□□□□ 0.74
UBB-207ENST00000578649 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
UBB-207ENST00000578649 GCC2Q8IWJ2 1684 aa19.66■□□□□ 0.74
UBB-207ENST00000578649 SLC26A8Q96RN1 970 aa19.66■□□□□ 0.74
UBB-207ENST00000578649 NUP155O75694 1391 aa19.64■□□□□ 0.73
UBB-207ENST00000578649 E9PCH4 1651 aa19.64■□□□□ 0.73
UBB-207ENST00000578649 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms