RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 SHANK2Q9UPX8 1470 aa32.02■■■□□ 2.72
LIMD2-202ENST00000578061 NPATQ14207 1427 aa32.01■■■□□ 2.72
LIMD2-202ENST00000578061 WASHC2CQ9Y4E1 1318 aa32■■■□□ 2.71
LIMD2-202ENST00000578061 PTPRKQ15262 1439 aa32■■■□□ 2.71
LIMD2-202ENST00000578061 KIF15Q9NS87 1388 aa31.99■■■□□ 2.71
LIMD2-202ENST00000578061 KDM5DQ9BY66 1539 aa31.97■■■□□ 2.71
LIMD2-202ENST00000578061 DUOX2Q9NRD8 1548 aa31.96■■■□□ 2.71
LIMD2-202ENST00000578061 FBXO31Q5XUX0 539 aaPredicted RBP31.92■■■□□ 2.7
LIMD2-202ENST00000578061 RNF17Q9BXT8 1623 aaKnown RBP31.92■■■□□ 2.7
LIMD2-202ENST00000578061 EIF2AK4Q9P2K8 1649 aaKnown RBP31.92■■■□□ 2.7
LIMD2-202ENST00000578061 ANKRD30AQ9BXX3 1397 aa31.89■■■□□ 2.7
LIMD2-202ENST00000578061 FAM135AQ9P2D6 1515 aa31.89■■■□□ 2.7
LIMD2-202ENST00000578061 MYO3AQ8NEV4 1616 aa31.86■■■□□ 2.69
LIMD2-202ENST00000578061 MROH1Q8NDA8 1641 aa31.86■■■□□ 2.69
LIMD2-202ENST00000578061 PZPP20742 1482 aa31.85■■■□□ 2.69
LIMD2-202ENST00000578061 ERBINQ96RT1 1412 aa31.85■■■□□ 2.69
LIMD2-202ENST00000578061 ABCC3O15438 1527 aa31.85■■■□□ 2.69
LIMD2-202ENST00000578061 STRCQ7RTU9 1775 aa31.84■■■□□ 2.69
LIMD2-202ENST00000578061 NCOA1Q15788 1441 aa31.83■■■□□ 2.69
LIMD2-202ENST00000578061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.83■■■□□ 2.69
LIMD2-202ENST00000578061 TNRQ92752 1358 aa31.81■■■□□ 2.68
LIMD2-202ENST00000578061 CEP170BQ9Y4F5 1589 aaPredicted RBP31.8■■■□□ 2.68
LIMD2-202ENST00000578061 CAMSAP1Q5T5Y3 1602 aa31.79■■■□□ 2.68
LIMD2-202ENST00000578061 ILDR1Q86SU0 546 aaPredicted RBP31.79■■■□□ 2.68
LIMD2-202ENST00000578061 ADGRL2O95490 1459 aa31.78■■■□□ 2.68
LIMD2-202ENST00000578061 ZC3H13Q5T200 1668 aaKnown RBP31.77■■■□□ 2.68
LIMD2-202ENST00000578061 DMRT2Q9Y5R5 561 aa31.77■■■□□ 2.68
LIMD2-202ENST00000578061 CEP152O94986 1710 aa31.77■■■□□ 2.68
LIMD2-202ENST00000578061 ZNF142P52746 1687 aaPredicted RBP31.76■■■□□ 2.68
LIMD2-202ENST00000578061 ITGAEP38570 1179 aa31.75■■■□□ 2.67
LIMD2-202ENST00000578061 PRDM15P57071 1507 aaPredicted RBP31.74■■■□□ 2.67
LIMD2-202ENST00000578061 NCKAP5LQ9HCH0 1330 aa31.74■■■□□ 2.67
LIMD2-202ENST00000578061 A2ML1A8K2U0 1454 aa31.73■■■□□ 2.67
LIMD2-202ENST00000578061 DEPDC5O75140 1603 aa31.69■■■□□ 2.66
LIMD2-202ENST00000578061 KANK1Q14678 1352 aa31.68■■■□□ 2.66
LIMD2-202ENST00000578061 ANKRD50Q9ULJ7 1429 aa31.67■■■□□ 2.66
LIMD2-202ENST00000578061 PTPRTO14522 1441 aa31.66■■■□□ 2.66
LIMD2-202ENST00000578061 ERVK-7P63135 1459 aa31.66■■■□□ 2.66
LIMD2-202ENST00000578061 SPATA31D1Q6ZQQ2 1576 aa31.64■■■□□ 2.66
LIMD2-202ENST00000578061 PLA2R1Q13018 1463 aa31.64■■■□□ 2.66
LIMD2-202ENST00000578061 NLRP1Q9C000 1473 aa31.62■■■□□ 2.65
LIMD2-202ENST00000578061 CFAP65Q6ZU64 1925 aaKnown RBP31.61■■■□□ 2.65
LIMD2-202ENST00000578061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.61■■■□□ 2.65
LIMD2-202ENST00000578061 PKD2Q13563 968 aa31.6■■■□□ 2.65
LIMD2-202ENST00000578061 ARHGAP31Q2M1Z3 1444 aa31.59■■■□□ 2.65
LIMD2-202ENST00000578061 ROCK1Q13464 1354 aa31.59■■■□□ 2.65
LIMD2-202ENST00000578061 CERKQ8TCT0 537 aa31.59■■■□□ 2.65
LIMD2-202ENST00000578061 VWDEQ8N2E2 1590 aa31.58■■■□□ 2.65
LIMD2-202ENST00000578061 UGGT1Q9NYU2 1555 aa31.57■■■□□ 2.64
LIMD2-202ENST00000578061 FBXO41Q8TF61 875 aa31.56■■■□□ 2.64
LIMD2-202ENST00000578061 LMTK2Q8IWU2 1503 aa31.55■■■□□ 2.64
LIMD2-202ENST00000578061 THEMISQ8N1K5 641 aaPredicted RBP31.55■■■□□ 2.64
LIMD2-202ENST00000578061 RRBP1Q9P2E9 1410 aaKnown RBP31.55■■■□□ 2.64
LIMD2-202ENST00000578061 ANKLE2Q86XL3 938 aa31.48■■■□□ 2.63
LIMD2-202ENST00000578061 EFCAB6Q5THR3 1501 aa31.48■■■□□ 2.63
LIMD2-202ENST00000578061 ZNF335Q9H4Z2 1342 aaPredicted RBP31.46■■■□□ 2.63
LIMD2-202ENST00000578061 NEURL4Q96JN8 1562 aa31.45■■■□□ 2.63
LIMD2-202ENST00000578061 UNC13BO14795 1591 aa31.44■■■□□ 2.62
LIMD2-202ENST00000578061 POLR1AO95602 1720 aaPredicted RBP31.44■■■□□ 2.62
LIMD2-202ENST00000578061 LTBP4Q8N2S1 1624 aa31.43■■■□□ 2.62
LIMD2-202ENST00000578061 UBR1Q8IWV7 1749 aa31.41■■■□□ 2.62
LIMD2-202ENST00000578061 SYNMO15061 1565 aa31.39■■■□□ 2.62
LIMD2-202ENST00000578061 IDI1Q13907 227 aa31.39■■■□□ 2.62
LIMD2-202ENST00000578061 NOS1P29475 1434 aa31.39■■■□□ 2.62
LIMD2-202ENST00000578061 PIK3C2BO00750 1634 aa31.38■■■□□ 2.61
LIMD2-202ENST00000578061 STAG3Q9UJ98 1225 aa31.38■■■□□ 2.61
LIMD2-202ENST00000578061 NUP155O75694 1391 aa31.38■■■□□ 2.61
LIMD2-202ENST00000578061 TET3O43151 1660 aa31.38■■■□□ 2.61
LIMD2-202ENST00000578061 NPHP4O75161 1426 aaPredicted RBP31.37■■■□□ 2.61
LIMD2-202ENST00000578061 RPRD2Q5VT52 1461 aaKnown RBP31.33■■■□□ 2.61
LIMD2-202ENST00000578061 MED14O60244 1454 aa31.32■■■□□ 2.6
LIMD2-202ENST00000578061 IQGAP3Q86VI3 1631 aa31.31■■■□□ 2.6
LIMD2-202ENST00000578061 LTKP29376 864 aa31.31■■■□□ 2.6
LIMD2-202ENST00000578061 GCC2Q8IWJ2 1684 aa31.31■■■□□ 2.6
LIMD2-202ENST00000578061 TXNDC2Q86VQ3 553 aa31.3■■■□□ 2.6
LIMD2-202ENST00000578061 NAIPQ13075 1403 aa31.3■■■□□ 2.6
LIMD2-202ENST00000578061 ARHGAP23Q9P227 1491 aa31.28■■■□□ 2.6
LIMD2-202ENST00000578061 SLC52A1Q9NWF4 448 aa31.28■■■□□ 2.6
LIMD2-202ENST00000578061 SLIT1O75093 1534 aa31.28■■■□□ 2.6
LIMD2-202ENST00000578061 SCAF11Q99590 1463 aaKnown RBP31.27■■■□□ 2.6
LIMD2-202ENST00000578061 E9PCH4 1651 aa31.27■■■□□ 2.6
LIMD2-202ENST00000578061 IQGAP1P46940 1657 aa31.27■■■□□ 2.6
LIMD2-202ENST00000578061 TMEM2Q9UHN6 1383 aa31.27■■■□□ 2.6
LIMD2-202ENST00000578061 EID1Q9Y6B2 187 aa31.25■■■□□ 2.59
LIMD2-202ENST00000578061 ADGRB3O60242 1522 aa31.23■■■□□ 2.59
LIMD2-202ENST00000578061 KDM5AP29375 1690 aaKnown RBP31.19■■■□□ 2.58
LIMD2-202ENST00000578061 HFM1A2PYH4 1435 aa31.19■■■□□ 2.58
LIMD2-202ENST00000578061 CHGAP10645 457 aaKnown RBP31.18■■■□□ 2.58
LIMD2-202ENST00000578061 IQSEC2Q5JU85 1478 aa31.18■■■□□ 2.58
LIMD2-202ENST00000578061 TRIM52Q96A61 297 aa31.16■■■□□ 2.58
LIMD2-202ENST00000578061 SENP3Q9H4L4 574 aaPredicted RBP31.14■■■□□ 2.58
LIMD2-202ENST00000578061 CPS1P31327 1500 aa31.13■■■□□ 2.57
LIMD2-202ENST00000578061 MYO5BQ9ULV0 1848 aa31.1■■■□□ 2.57
LIMD2-202ENST00000578061 TMEM131LA2VDJ0 1609 aa31.1■■■□□ 2.57
LIMD2-202ENST00000578061 UBAP1LF5GYI3 381 aa31.1■■■□□ 2.57
LIMD2-202ENST00000578061 BCANQ96GW7 911 aa31.07■■■□□ 2.56
LIMD2-202ENST00000578061 SLC26A8Q96RN1 970 aa31.07■■■□□ 2.56
LIMD2-202ENST00000578061 STRCP1A6NGW2 1772 aa31.07■■■□□ 2.56
LIMD2-202ENST00000578061 RIMS2Q9UQ26 1411 aa31.07■■■□□ 2.56
LIMD2-202ENST00000578061 NUTM2DQ5VT03 806 aaPredicted RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms