RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
SEC22B-201ENST00000578049 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
SEC22B-201ENST00000578049 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
SEC22B-201ENST00000578049 MTERF4Q7Z6M4 381 aaKnown RBP13.29□□□□□ -0.28
SEC22B-201ENST00000578049 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
SEC22B-201ENST00000578049 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
SEC22B-201ENST00000578049 REC8O95072 547 aa13.27□□□□□ -0.28
SEC22B-201ENST00000578049 CCDC144AA2RUR9 1427 aa13.27□□□□□ -0.28
SEC22B-201ENST00000578049 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.29
SEC22B-201ENST00000578049 USP47Q96K76 1375 aa13.27□□□□□ -0.29
SEC22B-201ENST00000578049 DDX19BQ9UMR2 479 aa13.27□□□□□ -0.29
SEC22B-201ENST00000578049 APBB1O00213 710 aa13.26□□□□□ -0.29
SEC22B-201ENST00000578049 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
SEC22B-201ENST00000578049 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
SEC22B-201ENST00000578049 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
SEC22B-201ENST00000578049 NUCB2P80303 420 aa13.25□□□□□ -0.29
SEC22B-201ENST00000578049 GPS2Q13227 327 aa13.25□□□□□ -0.29
SEC22B-201ENST00000578049 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
SEC22B-201ENST00000578049 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
SEC22B-201ENST00000578049 TPM3P06753 285 aa13.24□□□□□ -0.29
SEC22B-201ENST00000578049 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
SEC22B-201ENST00000578049 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
SEC22B-201ENST00000578049 MRE11P49959 708 aa13.23□□□□□ -0.29
SEC22B-201ENST00000578049 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
SEC22B-201ENST00000578049 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
SEC22B-201ENST00000578049 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
SEC22B-201ENST00000578049 PANK3Q9H999 370 aa13.22□□□□□ -0.29
SEC22B-201ENST00000578049 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
SEC22B-201ENST00000578049 CCDC7Q96M83 1385 aa13.21□□□□□ -0.29
SEC22B-201ENST00000578049 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
SEC22B-201ENST00000578049 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.29
SEC22B-201ENST00000578049 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
SEC22B-201ENST00000578049 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.3
SEC22B-201ENST00000578049 FAM43AQ8N2R8 423 aa13.21□□□□□ -0.3
SEC22B-201ENST00000578049 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
SEC22B-201ENST00000578049 RUFY2Q8WXA3 655 aa13.2□□□□□ -0.3
SEC22B-201ENST00000578049 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
SEC22B-201ENST00000578049 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
SEC22B-201ENST00000578049 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
SEC22B-201ENST00000578049 BECN2A8MW95 431 aa13.19□□□□□ -0.3
SEC22B-201ENST00000578049 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
SEC22B-201ENST00000578049 SF3A1Q15459 793 aaKnown RBP13.18□□□□□ -0.3
SEC22B-201ENST00000578049 GGT6Q6P531 493 aa13.18□□□□□ -0.3
SEC22B-201ENST00000578049 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
SEC22B-201ENST00000578049 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
SEC22B-201ENST00000578049 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
SEC22B-201ENST00000578049 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
SEC22B-201ENST00000578049 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
SEC22B-201ENST00000578049 NFKBIBQ15653 356 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 ANKRD45Q5TZF3 282 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 NPHP1O15259 732 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 STK26Q9P289 416 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 CUX1P39880 1505 aa13.17□□□□□ -0.3
SEC22B-201ENST00000578049 SETQ01105 290 aaPredicted RBP13.16□□□□□ -0.3
SEC22B-201ENST00000578049 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
SEC22B-201ENST00000578049 TPM1P09493 284 aa13.16□□□□□ -0.3
SEC22B-201ENST00000578049 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
SEC22B-201ENST00000578049 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
SEC22B-201ENST00000578049 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
SEC22B-201ENST00000578049 TEX35Q5T0J7 233 aa13.15□□□□□ -0.3
SEC22B-201ENST00000578049 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
SEC22B-201ENST00000578049 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
SEC22B-201ENST00000578049 EVC2Q86UK5 1308 aa13.15□□□□□ -0.3
SEC22B-201ENST00000578049 KIF3BO15066 747 aa13.15□□□□□ -0.3
SEC22B-201ENST00000578049 TPM2P07951 284 aa13.15□□□□□ -0.3
SEC22B-201ENST00000578049 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
SEC22B-201ENST00000578049 WIZO95785 1651 aa13.14□□□□□ -0.31
SEC22B-201ENST00000578049 TSR1Q2NL82 804 aaKnown RBP13.14□□□□□ -0.31
SEC22B-201ENST00000578049 H3BQV1 296 aa13.14□□□□□ -0.31
SEC22B-201ENST00000578049 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
SEC22B-201ENST00000578049 SLC4A10Q6U841 1118 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 APAF1O14727 1248 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
SEC22B-201ENST00000578049 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 ARID3AQ99856 593 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 PLIN1O60240 522 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 MBD3O95983 291 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
SEC22B-201ENST00000578049 A0A0U1RQG5 324 aaPredicted RBP13.12□□□□□ -0.31
SEC22B-201ENST00000578049 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
SEC22B-201ENST00000578049 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
SEC22B-201ENST00000578049 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
SEC22B-201ENST00000578049 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
SEC22B-201ENST00000578049 CCDC39Q9UFE4 941 aa13.12□□□□□ -0.31
SEC22B-201ENST00000578049 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
SEC22B-201ENST00000578049 SOX12O15370 315 aa13.11□□□□□ -0.31
SEC22B-201ENST00000578049 ARGLU1Q9NWB6 273 aaPredicted RBP13.11□□□□□ -0.31
SEC22B-201ENST00000578049 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
SEC22B-201ENST00000578049 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
SEC22B-201ENST00000578049 MCM2P49736 904 aa13.1□□□□□ -0.31
SEC22B-201ENST00000578049 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEC22B-201ENST00000578049 LETM1O95202 739 aaPredicted RBP13.09□□□□□ -0.31
SEC22B-201ENST00000578049 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
SEC22B-201ENST00000578049 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms