RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
CDK5RAP3-205ENST00000577802 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-205ENST00000577802 PRDM15P57071 1507 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-205ENST00000577802 DHX57Q6P158 1386 aaKnown RBP19.58■□□□□ 0.73
CDK5RAP3-205ENST00000577802 IQGAP3Q86VI3 1631 aa19.58■□□□□ 0.73
CDK5RAP3-205ENST00000577802 ATP10AO60312 1499 aa19.58■□□□□ 0.72
CDK5RAP3-205ENST00000577802 COL17A1Q9UMD9 1497 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-205ENST00000577802 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
CDK5RAP3-205ENST00000577802 YEATS2Q9ULM3 1422 aa19.56■□□□□ 0.72
CDK5RAP3-205ENST00000577802 AGLP35573 1532 aa19.56■□□□□ 0.72
CDK5RAP3-205ENST00000577802 FAM135AQ9P2D6 1515 aa19.56■□□□□ 0.72
CDK5RAP3-205ENST00000577802 KANK1Q14678 1352 aa19.55■□□□□ 0.72
CDK5RAP3-205ENST00000577802 ZC3H13Q5T200 1668 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-205ENST00000577802 NUP155O75694 1391 aa19.52■□□□□ 0.72
CDK5RAP3-205ENST00000577802 PZPP20742 1482 aa19.5■□□□□ 0.71
CDK5RAP3-205ENST00000577802 MROH1Q8NDA8 1641 aa19.5■□□□□ 0.71
CDK5RAP3-205ENST00000577802 TET3O43151 1660 aa19.49■□□□□ 0.71
CDK5RAP3-205ENST00000577802 VWDEQ8N2E2 1590 aa19.49■□□□□ 0.71
CDK5RAP3-205ENST00000577802 KIF3BO15066 747 aa19.48■□□□□ 0.71
CDK5RAP3-205ENST00000577802 LMTK2Q8IWU2 1503 aa19.46■□□□□ 0.71
CDK5RAP3-205ENST00000577802 ZEB1P37275 1124 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP3-205ENST00000577802 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-205ENST00000577802 MPHOSPH9Q99550 1183 aa19.45■□□□□ 0.7
CDK5RAP3-205ENST00000577802 EFCAB6Q5THR3 1501 aa19.42■□□□□ 0.7
CDK5RAP3-205ENST00000577802 CEP152O94986 1710 aa19.42■□□□□ 0.7
CDK5RAP3-205ENST00000577802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.41■□□□□ 0.71e-10■□□□□ 10.8
CDK5RAP3-205ENST00000577802 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
CDK5RAP3-205ENST00000577802 RPRD2Q5VT52 1461 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-205ENST00000577802 ABCC3O15438 1527 aa19.4■□□□□ 0.7
CDK5RAP3-205ENST00000577802 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
CDK5RAP3-205ENST00000577802 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
CDK5RAP3-205ENST00000577802 E9PCH4 1651 aa19.37■□□□□ 0.69
CDK5RAP3-205ENST00000577802 PKD2Q13563 968 aa19.36■□□□□ 0.69
CDK5RAP3-205ENST00000577802 SPHKAPQ2M3C7 1700 aa19.36■□□□□ 0.69
CDK5RAP3-205ENST00000577802 GGT6Q6P531 493 aa19.35■□□□□ 0.69
CDK5RAP3-205ENST00000577802 WASHC2CQ9Y4E1 1318 aa19.33■□□□□ 0.69
CDK5RAP3-205ENST00000577802 MROH2AA6NES4 1674 aa19.33■□□□□ 0.68
CDK5RAP3-205ENST00000577802 CNTLNQ9NXG0 1405 aa19.33■□□□□ 0.68
CDK5RAP3-205ENST00000577802 TRPM2O94759 1503 aa19.32■□□□□ 0.68
CDK5RAP3-205ENST00000577802 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
CDK5RAP3-205ENST00000577802 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
CDK5RAP3-205ENST00000577802 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
CDK5RAP3-205ENST00000577802 ARID4BQ4LE39 1312 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-205ENST00000577802 CLTCQ00610 1675 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-205ENST00000577802 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
CDK5RAP3-205ENST00000577802 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
CDK5RAP3-205ENST00000577802 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
CDK5RAP3-205ENST00000577802 FER1L4A9Z1Z3 1794 aa19.28■□□□□ 0.68
CDK5RAP3-205ENST00000577802 PTPRTO14522 1441 aa19.25■□□□□ 0.67
CDK5RAP3-205ENST00000577802 NPATQ14207 1427 aa19.25■□□□□ 0.67
CDK5RAP3-205ENST00000577802 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
CDK5RAP3-205ENST00000577802 PREX1Q8TCU6 1659 aa19.24■□□□□ 0.67
CDK5RAP3-205ENST00000577802 FOXD1Q16676 465 aa19.23■□□□□ 0.67
CDK5RAP3-205ENST00000577802 NEURL4Q96JN8 1562 aa19.22■□□□□ 0.67
CDK5RAP3-205ENST00000577802 MLECQ14165 292 aa19.2■□□□□ 0.66
CDK5RAP3-205ENST00000577802 NOS1P29475 1434 aa19.19■□□□□ 0.66
CDK5RAP3-205ENST00000577802 CLTCL1P53675 1640 aa19.19■□□□□ 0.66
CDK5RAP3-205ENST00000577802 PLA2R1Q13018 1463 aa19.19■□□□□ 0.66
CDK5RAP3-205ENST00000577802 SPATA31D1Q6ZQQ2 1576 aa19.19■□□□□ 0.66
CDK5RAP3-205ENST00000577802 ERVK-7P63135 1459 aa19.18■□□□□ 0.66
CDK5RAP3-205ENST00000577802 NEUROD1Q13562 356 aa19.18■□□□□ 0.66
CDK5RAP3-205ENST00000577802 KIF1BO60333 1816 aa19.18■□□□□ 0.66
CDK5RAP3-205ENST00000577802 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
CDK5RAP3-205ENST00000577802 ADAMTSL3P82987 1691 aa19.17■□□□□ 0.66
CDK5RAP3-205ENST00000577802 MADDQ8WXG6 1647 aa19.16■□□□□ 0.66
CDK5RAP3-205ENST00000577802 SIN3AQ96ST3 1273 aa19.16■□□□□ 0.66
CDK5RAP3-205ENST00000577802 SYNMO15061 1565 aa19.15■□□□□ 0.66
CDK5RAP3-205ENST00000577802 C3P01024 1663 aa19.14■□□□□ 0.65
CDK5RAP3-205ENST00000577802 RIMS1Q86UR5 1692 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP3-205ENST00000577802 ADGRB3O60242 1522 aa19.12■□□□□ 0.65
CDK5RAP3-205ENST00000577802 ZMYM3Q14202 1370 aa19.12■□□□□ 0.65
CDK5RAP3-205ENST00000577802 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
CDK5RAP3-205ENST00000577802 KDM5AP29375 1690 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP3-205ENST00000577802 UGGT1Q9NYU2 1555 aa19.09■□□□□ 0.65
CDK5RAP3-205ENST00000577802 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.64
CDK5RAP3-205ENST00000577802 CFAP65Q6ZU64 1925 aaKnown RBP19.07■□□□□ 0.64
CDK5RAP3-205ENST00000577802 NLRP1Q9C000 1473 aa19.06■□□□□ 0.64
CDK5RAP3-205ENST00000577802 TNRQ92752 1358 aa19.06■□□□□ 0.64
CDK5RAP3-205ENST00000577802 STAC3Q96MF2 364 aa19.05■□□□□ 0.64
CDK5RAP3-205ENST00000577802 IFT172Q9UG01 1749 aa19.04■□□□□ 0.64
CDK5RAP3-205ENST00000577802 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
CDK5RAP3-205ENST00000577802 TMEM131LA2VDJ0 1609 aa19.02■□□□□ 0.64
CDK5RAP3-205ENST00000577802 MYOM2P54296 1465 aa19.02■□□□□ 0.63
CDK5RAP3-205ENST00000577802 L3MBTL2Q969R5 705 aa19.01■□□□□ 0.63
CDK5RAP3-205ENST00000577802 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
CDK5RAP3-205ENST00000577802 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
CDK5RAP3-205ENST00000577802 PPLO60437 1756 aa18.99■□□□□ 0.63
CDK5RAP3-205ENST00000577802 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
CDK5RAP3-205ENST00000577802 FBXO31Q5XUX0 539 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-205ENST00000577802 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-205ENST00000577802 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-205ENST00000577802 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
CDK5RAP3-205ENST00000577802 UBR1Q8IWV7 1749 aa18.96■□□□□ 0.63
CDK5RAP3-205ENST00000577802 PTPRMP28827 1452 aa18.96■□□□□ 0.63
CDK5RAP3-205ENST00000577802 IDI1Q13907 227 aa18.95■□□□□ 0.62
CDK5RAP3-205ENST00000577802 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
CDK5RAP3-205ENST00000577802 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-205ENST00000577802 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
CDK5RAP3-205ENST00000577802 MYO5BQ9ULV0 1848 aa18.95■□□□□ 0.62
CDK5RAP3-205ENST00000577802 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms