RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 RRBP1Q9P2E9 1410 aaKnown RBP23.94■■□□□ 1.42
NCBP3-207ENST00000577169 CLTCQ00610 1675 aaKnown RBP23.94■■□□□ 1.42
NCBP3-207ENST00000577169 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
NCBP3-207ENST00000577169 C3P01024 1663 aa23.93■■□□□ 1.42
NCBP3-207ENST00000577169 WASHC2CQ9Y4E1 1318 aa23.93■■□□□ 1.42
NCBP3-207ENST00000577169 EIF2AK4Q9P2K8 1649 aaKnown RBP23.91■■□□□ 1.42
NCBP3-207ENST00000577169 ERBINQ96RT1 1412 aa23.9■■□□□ 1.42
NCBP3-207ENST00000577169 MROH2AA6NES4 1674 aa23.89■■□□□ 1.42
NCBP3-207ENST00000577169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.88■■□□□ 1.417e-9■■■■□ 23.1
NCBP3-207ENST00000577169 RNF17Q9BXT8 1623 aaKnown RBP23.87■■□□□ 1.41
NCBP3-207ENST00000577169 SETD1BQ9UPS6 1966 aaKnown RBP23.86■■□□□ 1.41
NCBP3-207ENST00000577169 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
NCBP3-207ENST00000577169 KDM5DQ9BY66 1539 aa23.84■■□□□ 1.41
NCBP3-207ENST00000577169 MROH1Q8NDA8 1641 aa23.83■■□□□ 1.41
NCBP3-207ENST00000577169 ANKRD50Q9ULJ7 1429 aa23.83■■□□□ 1.4
NCBP3-207ENST00000577169 LMTK3Q96Q04 1460 aa23.82■■□□□ 1.4
NCBP3-207ENST00000577169 FBXO31Q5XUX0 539 aaPredicted RBP23.82■■□□□ 1.4
NCBP3-207ENST00000577169 FAM135AQ9P2D6 1515 aa23.81■■□□□ 1.4
NCBP3-207ENST00000577169 HSPA2P54652 639 aa23.81■■□□□ 1.4
NCBP3-207ENST00000577169 NPATQ14207 1427 aa23.8■■□□□ 1.4
NCBP3-207ENST00000577169 ABCC3O15438 1527 aa23.79■■□□□ 1.4
NCBP3-207ENST00000577169 PREX1Q8TCU6 1659 aa23.78■■□□□ 1.4
NCBP3-207ENST00000577169 KANK1Q14678 1352 aa23.78■■□□□ 1.4
NCBP3-207ENST00000577169 UHRF1BP1Q6BDS2 1440 aa23.76■■□□□ 1.39
NCBP3-207ENST00000577169 DEPDC5O75140 1603 aa23.76■■□□□ 1.39
NCBP3-207ENST00000577169 CEP152O94986 1710 aa23.76■■□□□ 1.39
NCBP3-207ENST00000577169 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
NCBP3-207ENST00000577169 ZC3H13Q5T200 1668 aaKnown RBP23.74■■□□□ 1.39
NCBP3-207ENST00000577169 PZPP20742 1482 aa23.74■■□□□ 1.39
NCBP3-207ENST00000577169 CFAP65Q6ZU64 1925 aaKnown RBP23.71■■□□□ 1.39
NCBP3-207ENST00000577169 TNRQ92752 1358 aa23.69■■□□□ 1.38
NCBP3-207ENST00000577169 CAMSAP1Q5T5Y3 1602 aa23.69■■□□□ 1.38
NCBP3-207ENST00000577169 VWDEQ8N2E2 1590 aa23.69■■□□□ 1.38
NCBP3-207ENST00000577169 NAIPQ13075 1403 aa23.67■■□□□ 1.38
NCBP3-207ENST00000577169 ARHGAP31Q2M1Z3 1444 aa23.67■■□□□ 1.38
NCBP3-207ENST00000577169 LMTK2Q8IWU2 1503 aa23.65■■□□□ 1.38
NCBP3-207ENST00000577169 UNC13BO14795 1591 aa23.63■■□□□ 1.37
NCBP3-207ENST00000577169 NUP155O75694 1391 aa23.63■■□□□ 1.37
NCBP3-207ENST00000577169 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
NCBP3-207ENST00000577169 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
NCBP3-207ENST00000577169 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
NCBP3-207ENST00000577169 HFM1A2PYH4 1435 aa23.6■■□□□ 1.37
NCBP3-207ENST00000577169 A2ML1A8K2U0 1454 aa23.6■■□□□ 1.37
NCBP3-207ENST00000577169 CEP170BQ9Y4F5 1589 aaPredicted RBP23.59■■□□□ 1.37
NCBP3-207ENST00000577169 GCC2Q8IWJ2 1684 aa23.58■■□□□ 1.37
NCBP3-207ENST00000577169 ZNF142P52746 1687 aaPredicted RBP23.57■■□□□ 1.36
NCBP3-207ENST00000577169 NLRP1Q9C000 1473 aa23.56■■□□□ 1.36
NCBP3-207ENST00000577169 EFCAB6Q5THR3 1501 aa23.56■■□□□ 1.36
NCBP3-207ENST00000577169 TRIM52Q96A61 297 aa23.55■■□□□ 1.36
NCBP3-207ENST00000577169 IQGAP3Q86VI3 1631 aa23.55■■□□□ 1.36
NCBP3-207ENST00000577169 STRCQ7RTU9 1775 aa23.55■■□□□ 1.36
NCBP3-207ENST00000577169 TET3O43151 1660 aa23.54■■□□□ 1.36
NCBP3-207ENST00000577169 THEMISQ8N1K5 641 aaPredicted RBP23.54■■□□□ 1.36
NCBP3-207ENST00000577169 NCKAP5LQ9HCH0 1330 aa23.54■■□□□ 1.36
NCBP3-207ENST00000577169 DMRT2Q9Y5R5 561 aa23.52■■□□□ 1.36
NCBP3-207ENST00000577169 NOS1P29475 1434 aa23.51■■□□□ 1.35
NCBP3-207ENST00000577169 IDI1Q13907 227 aa23.51■■□□□ 1.35
NCBP3-207ENST00000577169 RPRD2Q5VT52 1461 aaKnown RBP23.5■■□□□ 1.35
NCBP3-207ENST00000577169 UGGT1Q9NYU2 1555 aa23.5■■□□□ 1.35
NCBP3-207ENST00000577169 E9PCH4 1651 aa23.48■■□□□ 1.35
NCBP3-207ENST00000577169 PKD2Q13563 968 aa23.48■■□□□ 1.35
NCBP3-207ENST00000577169 SLC52A1Q9NWF4 448 aa23.47■■□□□ 1.35
NCBP3-207ENST00000577169 PLA2R1Q13018 1463 aa23.47■■□□□ 1.35
NCBP3-207ENST00000577169 SYNMO15061 1565 aa23.47■■□□□ 1.35
NCBP3-207ENST00000577169 SETD5Q9C0A6 1442 aa23.46■■□□□ 1.35
NCBP3-207ENST00000577169 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
NCBP3-207ENST00000577169 ANKLE2Q86XL3 938 aa23.45■■□□□ 1.34
NCBP3-207ENST00000577169 PTPRTO14522 1441 aa23.43■■□□□ 1.34
NCBP3-207ENST00000577169 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
NCBP3-207ENST00000577169 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
NCBP3-207ENST00000577169 SLC4A1APQ9BWU0 796 aaKnown RBP23.42■■□□□ 1.34
NCBP3-207ENST00000577169 CHGAP10645 457 aaKnown RBP23.37■■□□□ 1.33
NCBP3-207ENST00000577169 TXNDC2Q86VQ3 553 aa23.37■■□□□ 1.33
NCBP3-207ENST00000577169 LTKP29376 864 aa23.36■■□□□ 1.33
NCBP3-207ENST00000577169 MPHOSPH9Q99550 1183 aa23.36■■□□□ 1.33
NCBP3-207ENST00000577169 RAB3GAP2Q9H2M9 1393 aa23.36■■□□□ 1.33
NCBP3-207ENST00000577169 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
NCBP3-207ENST00000577169 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.33
NCBP3-207ENST00000577169 TMEM2Q9UHN6 1383 aa23.33■■□□□ 1.33
NCBP3-207ENST00000577169 FOXD1Q16676 465 aa23.33■■□□□ 1.33
NCBP3-207ENST00000577169 EID1Q9Y6B2 187 aa23.33■■□□□ 1.33
NCBP3-207ENST00000577169 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
NCBP3-207ENST00000577169 ARHGAP23Q9P227 1491 aa23.32■■□□□ 1.32
NCBP3-207ENST00000577169 SLIT1O75093 1534 aa23.32■■□□□ 1.32
NCBP3-207ENST00000577169 NEURL4Q96JN8 1562 aa23.31■■□□□ 1.32
NCBP3-207ENST00000577169 SPHKAPQ2M3C7 1700 aa23.31■■□□□ 1.32
NCBP3-207ENST00000577169 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
NCBP3-207ENST00000577169 HRCP23327 699 aa23.3■■□□□ 1.32
NCBP3-207ENST00000577169 NPHP4O75161 1426 aaPredicted RBP23.3■■□□□ 1.32
NCBP3-207ENST00000577169 MED14O60244 1454 aa23.3■■□□□ 1.32
NCBP3-207ENST00000577169 TMEM131LA2VDJ0 1609 aa23.29■■□□□ 1.32
NCBP3-207ENST00000577169 MYO5BQ9ULV0 1848 aa23.29■■□□□ 1.32
NCBP3-207ENST00000577169 SCAF11Q99590 1463 aaKnown RBP23.28■■□□□ 1.32
NCBP3-207ENST00000577169 HDGFP51858 240 aaKnown RBP23.25■■□□□ 1.31
NCBP3-207ENST00000577169 ZNF335Q9H4Z2 1342 aaPredicted RBP23.25■■□□□ 1.31
NCBP3-207ENST00000577169 CERKQ8TCT0 537 aa23.24■■□□□ 1.31
NCBP3-207ENST00000577169 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
NCBP3-207ENST00000577169 TRPM2O94759 1503 aa23.23■■□□□ 1.31
NCBP3-207ENST00000577169 CLTCL1P53675 1640 aa23.22■■□□□ 1.31
NCBP3-207ENST00000577169 NUTM2DQ5VT03 806 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms