RNA–Protein interactions for RNA: ENST00000576513.2

SLC12A4-218, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-218ENST00000576513 UBAP1LF5GYI3 381 aa20.4■□□□□ 0.86
SLC12A4-218ENST00000576513 ZNF335Q9H4Z2 1342 aaPredicted RBP20.4■□□□□ 0.86
SLC12A4-218ENST00000576513 NCOA2Q15596 1464 aa20.39■□□□□ 0.85
SLC12A4-218ENST00000576513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.39■□□□□ 0.85
SLC12A4-218ENST00000576513 RTEL1-TNFRSF6BF6WH68 1400 aa20.38■□□□□ 0.85
SLC12A4-218ENST00000576513 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
SLC12A4-218ENST00000576513 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
SLC12A4-218ENST00000576513 DHX29Q7Z478 1369 aaKnown RBP20.35■□□□□ 0.85
SLC12A4-218ENST00000576513 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
SLC12A4-218ENST00000576513 MBD5Q9P267 1494 aa20.34■□□□□ 0.85
SLC12A4-218ENST00000576513 A2ML1A8K2U0 1454 aa20.33■□□□□ 0.85
SLC12A4-218ENST00000576513 KIF3BO15066 747 aa20.33■□□□□ 0.85
SLC12A4-218ENST00000576513 MYOM3Q5VTT5 1437 aa20.33■□□□□ 0.84
SLC12A4-218ENST00000576513 WASHC2CQ9Y4E1 1318 aa20.3■□□□□ 0.84
SLC12A4-218ENST00000576513 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
SLC12A4-218ENST00000576513 MIA2Q96PC5 1412 aa20.3■□□□□ 0.84
SLC12A4-218ENST00000576513 TNRQ92752 1358 aa20.29■□□□□ 0.84
SLC12A4-218ENST00000576513 CCDC141Q6ZP82 1450 aa20.29■□□□□ 0.84
SLC12A4-218ENST00000576513 FAM135AQ9P2D6 1515 aa20.28■□□□□ 0.84
SLC12A4-218ENST00000576513 DNMT1P26358 1616 aaKnown RBP20.28■□□□□ 0.84
SLC12A4-218ENST00000576513 TSPY4P0CV99 314 aa20.27■□□□□ 0.84
SLC12A4-218ENST00000576513 TSPY10P0CW01 314 aa20.27■□□□□ 0.84
SLC12A4-218ENST00000576513 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.83
SLC12A4-218ENST00000576513 FBXO31Q5XUX0 539 aaPredicted RBP20.26■□□□□ 0.83
SLC12A4-218ENST00000576513 TOM1O60784 492 aa20.25■□□□□ 0.83
SLC12A4-218ENST00000576513 ANKLE2Q86XL3 938 aa20.25■□□□□ 0.83
SLC12A4-218ENST00000576513 THEMISQ8N1K5 641 aaPredicted RBP20.25■□□□□ 0.83
SLC12A4-218ENST00000576513 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
SLC12A4-218ENST00000576513 PZPP20742 1482 aa20.24■□□□□ 0.83
SLC12A4-218ENST00000576513 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
SLC12A4-218ENST00000576513 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
SLC12A4-218ENST00000576513 CPS1P31327 1500 aa20.22■□□□□ 0.83
SLC12A4-218ENST00000576513 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
SLC12A4-218ENST00000576513 NLRP1Q9C000 1473 aa20.2■□□□□ 0.82
SLC12A4-218ENST00000576513 PIP4K2BP78356 416 aa20.2■□□□□ 0.82
SLC12A4-218ENST00000576513 SHANK2Q9UPX8 1470 aa20.19■□□□□ 0.82
SLC12A4-218ENST00000576513 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
SLC12A4-218ENST00000576513 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
SLC12A4-218ENST00000576513 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
SLC12A4-218ENST00000576513 NEURL4Q96JN8 1562 aa20.17■□□□□ 0.82
SLC12A4-218ENST00000576513 HSPA1LP34931 641 aa20.15■□□□□ 0.82
SLC12A4-218ENST00000576513 NPHP4O75161 1426 aaPredicted RBP20.14■□□□□ 0.81
SLC12A4-218ENST00000576513 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
SLC12A4-218ENST00000576513 MED14O60244 1454 aa20.11■□□□□ 0.81
SLC12A4-218ENST00000576513 HRCP23327 699 aa20.11■□□□□ 0.81
SLC12A4-218ENST00000576513 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
SLC12A4-218ENST00000576513 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.81
SLC12A4-218ENST00000576513 RNF17Q9BXT8 1623 aaKnown RBP20.08■□□□□ 0.8
SLC12A4-218ENST00000576513 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
SLC12A4-218ENST00000576513 MAST1Q9Y2H9 1570 aa20.07■□□□□ 0.8
SLC12A4-218ENST00000576513 ABCC3O15438 1527 aa20.07■□□□□ 0.8
SLC12A4-218ENST00000576513 EIF2AK4Q9P2K8 1649 aaKnown RBP20.06■□□□□ 0.8
SLC12A4-218ENST00000576513 ITGAEP38570 1179 aa20.06■□□□□ 0.8
SLC12A4-218ENST00000576513 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
SLC12A4-218ENST00000576513 MED1Q15648 1581 aaPredicted RBP20.04■□□□□ 0.8
SLC12A4-218ENST00000576513 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
SLC12A4-218ENST00000576513 ERVK-7P63135 1459 aa20.03■□□□□ 0.8
SLC12A4-218ENST00000576513 CFAP65Q6ZU64 1925 aaKnown RBP20.01■□□□□ 0.79
SLC12A4-218ENST00000576513 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
SLC12A4-218ENST00000576513 DUOX2Q9NRD8 1548 aa20■□□□□ 0.79
SLC12A4-218ENST00000576513 DAPK1P53355 1430 aa20■□□□□ 0.79
SLC12A4-218ENST00000576513 ACIN1Q9UKV3 1341 aaKnown RBP20■□□□□ 0.79
SLC12A4-218ENST00000576513 ROCK1Q13464 1354 aa19.99■□□□□ 0.79
SLC12A4-218ENST00000576513 ABCC5O15440 1437 aa19.99■□□□□ 0.79
SLC12A4-218ENST00000576513 TXNDC2Q86VQ3 553 aa19.98■□□□□ 0.79
SLC12A4-218ENST00000576513 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
SLC12A4-218ENST00000576513 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
SLC12A4-218ENST00000576513 SYNMO15061 1565 aa19.98■□□□□ 0.79
SLC12A4-218ENST00000576513 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
SLC12A4-218ENST00000576513 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
SLC12A4-218ENST00000576513 CEP152O94986 1710 aa19.97■□□□□ 0.79
SLC12A4-218ENST00000576513 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
SLC12A4-218ENST00000576513 UBR1Q8IWV7 1749 aa19.96■□□□□ 0.79
SLC12A4-218ENST00000576513 MROH1Q8NDA8 1641 aa19.95■□□□□ 0.78
SLC12A4-218ENST00000576513 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
SLC12A4-218ENST00000576513 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
SLC12A4-218ENST00000576513 KIF15Q9NS87 1388 aa19.95■□□□□ 0.78
SLC12A4-218ENST00000576513 KANK1Q14678 1352 aa19.94■□□□□ 0.78
SLC12A4-218ENST00000576513 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
SLC12A4-218ENST00000576513 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
SLC12A4-218ENST00000576513 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
SLC12A4-218ENST00000576513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.93■□□□□ 0.78
SLC12A4-218ENST00000576513 ALKQ9UM73 1620 aa19.93■□□□□ 0.78
SLC12A4-218ENST00000576513 NAIPQ13075 1403 aa19.93■□□□□ 0.78
SLC12A4-218ENST00000576513 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
SLC12A4-218ENST00000576513 CROCC2H7BZ55 1655 aa19.92■□□□□ 0.78
SLC12A4-218ENST00000576513 RRP7BPQ9NSQ0 103 aa19.92■□□□□ 0.78
SLC12A4-218ENST00000576513 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
SLC12A4-218ENST00000576513 LTKP29376 864 aa19.91■□□□□ 0.78
SLC12A4-218ENST00000576513 ADGRL2O95490 1459 aa19.91■□□□□ 0.78
SLC12A4-218ENST00000576513 SLIT1O75093 1534 aa19.91■□□□□ 0.78
SLC12A4-218ENST00000576513 PRDM15P57071 1507 aaPredicted RBP19.91■□□□□ 0.78
SLC12A4-218ENST00000576513 GCC2Q8IWJ2 1684 aa19.89■□□□□ 0.77
SLC12A4-218ENST00000576513 ARHGAP23Q9P227 1491 aa19.89■□□□□ 0.77
SLC12A4-218ENST00000576513 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
SLC12A4-218ENST00000576513 ANKRD30AQ9BXX3 1397 aa19.86■□□□□ 0.77
SLC12A4-218ENST00000576513 TMEM2Q9UHN6 1383 aa19.86■□□□□ 0.77
SLC12A4-218ENST00000576513 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
SLC12A4-218ENST00000576513 PIK3C2BO00750 1634 aa19.84■□□□□ 0.77
SLC12A4-218ENST00000576513 EFCAB6Q5THR3 1501 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms