RNA–Protein interactions for RNA: ENST00000575113.1

RFWD3-208, Transcript of ring finger and WD repeat domain 3, human

TSL 3

Gene RFWD3, Length 706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD3-208	ENST00000575113	APLP2	Q06481	763 aa		33.96	■■■■□ 3.03
RFWD3-208	ENST00000575113	ZNF142	P52746	1687 aa	Predicted RBP	33.96	■■■■□ 3.03
RFWD3-208	ENST00000575113	KDM5D	Q9BY66	1539 aa		33.95	■■■■□ 3.03
RFWD3-208	ENST00000575113	PLA2R1	Q13018	1463 aa		33.95	■■■■□ 3.02
RFWD3-208	ENST00000575113	MYOM3	Q5VTT5	1437 aa		33.94	■■■■□ 3.02
RFWD3-208	ENST00000575113	MIA2	Q96PC5	1412 aa		33.93	■■■■□ 3.02
RFWD3-208	ENST00000575113	FAM135A	Q9P2D6	1515 aa		33.93	■■■■□ 3.02
RFWD3-208	ENST00000575113	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.92	■■■■□ 3.02
RFWD3-208	ENST00000575113	TNR	Q92752	1358 aa		33.91	■■■■□ 3.02
RFWD3-208	ENST00000575113	A2ML1	A8K2U0	1454 aa		33.9	■■■■□ 3.02
RFWD3-208	ENST00000575113	LTBP4	Q8N2S1	1624 aa		33.89	■■■■□ 3.02
RFWD3-208	ENST00000575113	PZP	P20742	1482 aa		33.88	■■■■□ 3.01
RFWD3-208	ENST00000575113	TCOF1	Q13428	1488 aa	Known RBP	33.86	■■■■□ 3.01
RFWD3-208	ENST00000575113	MAST1	Q9Y2H9	1570 aa		33.85	■■■■□ 3.01
RFWD3-208	ENST00000575113	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.82	■■■■□ 3.01
RFWD3-208	ENST00000575113	DNMT1	P26358	1616 aa	Known RBP	33.81	■■■■□ 3
RFWD3-208	ENST00000575113	IQSEC2	Q5JU85	1478 aa		33.8	■■■■□ 3
RFWD3-208	ENST00000575113	RNF17	Q9BXT8	1623 aa	Known RBP	33.75	■■■□□ 2.99
RFWD3-208	ENST00000575113	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.73	■■■□□ 2.99
RFWD3-208	ENST00000575113	NLRP1	Q9C000	1473 aa		33.73	■■■□□ 2.99
RFWD3-208	ENST00000575113	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.72	■■■□□ 2.99
RFWD3-208	ENST00000575113	ABCC3	O15438	1527 aa		33.71	■■■□□ 2.99
RFWD3-208	ENST00000575113	DUOX2	Q9NRD8	1548 aa		33.71	■■■□□ 2.99
RFWD3-208	ENST00000575113	ANKLE2	Q86XL3	938 aa		33.7	■■■□□ 2.99
RFWD3-208	ENST00000575113	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.69	■■■□□ 2.98
RFWD3-208	ENST00000575113	KIF15	Q9NS87	1388 aa		33.68	■■■□□ 2.98
RFWD3-208	ENST00000575113	ZC3H13	Q5T200	1668 aa	Known RBP	33.68	■■■□□ 2.98
RFWD3-208	ENST00000575113	RRP7BP	Q9NSQ0	103 aa		33.67	■■■□□ 2.98
RFWD3-208	ENST00000575113	ABCC5	O15440	1437 aa		33.67	■■■□□ 2.98
RFWD3-208	ENST00000575113	UGGT1	Q9NYU2	1555 aa		33.67	■■■□□ 2.98
RFWD3-208	ENST00000575113	PTPN23	Q9H3S7	1636 aa		33.67	■■■□□ 2.98
RFWD3-208	ENST00000575113	SHANK2	Q9UPX8	1470 aa		33.66	■■■□□ 2.98
RFWD3-208	ENST00000575113	UBAP1L	F5GYI3	381 aa		33.64	■■■□□ 2.98
RFWD3-208	ENST00000575113	FGD6	Q6ZV73	1430 aa		33.63	■■■□□ 2.97
RFWD3-208	ENST00000575113	DAPK1	P53355	1430 aa		33.62	■■■□□ 2.97
RFWD3-208	ENST00000575113	POLR1A	O95602	1720 aa	Predicted RBP	33.61	■■■□□ 2.97
RFWD3-208	ENST00000575113	MROH1	Q8NDA8	1641 aa		33.61	■■■□□ 2.97
RFWD3-208	ENST00000575113	ERVK-7	P63135	1459 aa		33.6	■■■□□ 2.97
RFWD3-208	ENST00000575113	ERBIN	Q96RT1	1412 aa		33.6	■■■□□ 2.97
RFWD3-208	ENST00000575113	SPATA31D1	Q6ZQQ2	1576 aa		33.6	■■■□□ 2.97
RFWD3-208	ENST00000575113	NEURL4	Q96JN8	1562 aa		33.6	■■■□□ 2.97
RFWD3-208	ENST00000575113	CROCC2	H7BZ55	1655 aa		33.58	■■■□□ 2.97
RFWD3-208	ENST00000575113	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.57	■■■□□ 2.96	4e-8	■■■□□ 16.1
RFWD3-208	ENST00000575113	CHIC2	Q9UKJ5	165 aa		33.56	■■■□□ 2.96
RFWD3-208	ENST00000575113	DISP3	Q9P2K9	1392 aa		33.56	■■■□□ 2.96
RFWD3-208	ENST00000575113	NPHP4	O75161	1426 aa	Predicted RBP	33.54	■■■□□ 2.96
RFWD3-208	ENST00000575113	CEP152	O94986	1710 aa		33.54	■■■□□ 2.96
RFWD3-208	ENST00000575113	ANKRD30A	Q9BXX3	1397 aa		33.54	■■■□□ 2.96
RFWD3-208	ENST00000575113	KANK1	Q14678	1352 aa		33.52	■■■□□ 2.96
RFWD3-208	ENST00000575113	PRDM15	P57071	1507 aa	Predicted RBP	33.51	■■■□□ 2.95
RFWD3-208	ENST00000575113	CPS1	P31327	1500 aa		33.5	■■■□□ 2.95
RFWD3-208	ENST00000575113	MED14	O60244	1454 aa		33.5	■■■□□ 2.95
RFWD3-208	ENST00000575113	DEPDC5	O75140	1603 aa		33.49	■■■□□ 2.95
RFWD3-208	ENST00000575113	ARHGAP31	Q2M1Z3	1444 aa		33.47	■■■□□ 2.95
RFWD3-208	ENST00000575113	FAM50A	Q14320	339 aa	Known RBP	33.47	■■■□□ 2.95
RFWD3-208	ENST00000575113	SCAF1	Q9H7N4	1312 aa	Known RBP	33.43	■■■□□ 2.94
RFWD3-208	ENST00000575113	TOM1	O60784	492 aa		33.41	■■■□□ 2.94
RFWD3-208	ENST00000575113	IQGAP1	P46940	1657 aa		33.4	■■■□□ 2.94
RFWD3-208	ENST00000575113	VWDE	Q8N2E2	1590 aa		33.4	■■■□□ 2.94
RFWD3-208	ENST00000575113	CFAP65	Q6ZU64	1925 aa	Known RBP	33.39	■■■□□ 2.94
RFWD3-208	ENST00000575113	PIP4K2B	P78356	416 aa		33.38	■■■□□ 2.93
RFWD3-208	ENST00000575113	STAG3	Q9UJ98	1225 aa		33.37	■■■□□ 2.93
RFWD3-208	ENST00000575113	UBR1	Q8IWV7	1749 aa		33.36	■■■□□ 2.93
RFWD3-208	ENST00000575113	TXNDC2	Q86VQ3	553 aa		33.36	■■■□□ 2.93
RFWD3-208	ENST00000575113	EID1	Q9Y6B2	187 aa		33.35	■■■□□ 2.93
RFWD3-208	ENST00000575113	SCAF11	Q99590	1463 aa	Known RBP	33.35	■■■□□ 2.93
RFWD3-208	ENST00000575113	ADGRL2	O95490	1459 aa		33.33	■■■□□ 2.93
RFWD3-208	ENST00000575113	LTK	P29376	864 aa		33.31	■■■□□ 2.92
RFWD3-208	ENST00000575113	LMTK2	Q8IWU2	1503 aa		33.31	■■■□□ 2.92
RFWD3-208	ENST00000575113	SLIT1	O75093	1534 aa		33.29	■■■□□ 2.92
RFWD3-208	ENST00000575113	ILDR2	Q71H61	639 aa		33.29	■■■□□ 2.92
RFWD3-208	ENST00000575113	ARHGAP23	Q9P227	1491 aa		33.29	■■■□□ 2.92
RFWD3-208	ENST00000575113	ANKRD50	Q9ULJ7	1429 aa		33.26	■■■□□ 2.91
RFWD3-208	ENST00000575113	PIK3C2B	O00750	1634 aa		33.25	■■■□□ 2.91
RFWD3-208	ENST00000575113	IDI1	Q13907	227 aa		33.25	■■■□□ 2.91
RFWD3-208	ENST00000575113	TMEM2	Q9UHN6	1383 aa		33.24	■■■□□ 2.91
RFWD3-208	ENST00000575113	HSPA1L	P34931	641 aa		33.24	■■■□□ 2.91
RFWD3-208	ENST00000575113	EFCAB6	Q5THR3	1501 aa		33.22	■■■□□ 2.91
RFWD3-208	ENST00000575113	LRRC7	Q96NW7	1537 aa		33.22	■■■□□ 2.91
RFWD3-208	ENST00000575113	NOS1	P29475	1434 aa		33.18	■■■□□ 2.9
RFWD3-208	ENST00000575113	SYNM	O15061	1565 aa		33.17	■■■□□ 2.9
RFWD3-208	ENST00000575113	SLC52A1	Q9NWF4	448 aa		33.17	■■■□□ 2.9
RFWD3-208	ENST00000575113	STRCP1	A6NGW2	1772 aa		33.16	■■■□□ 2.9
RFWD3-208	ENST00000575113	KDM5A	P29375	1690 aa	Known RBP	33.13	■■■□□ 2.89
RFWD3-208	ENST00000575113	RPRD2	Q5VT52	1461 aa	Known RBP	33.12	■■■□□ 2.89
RFWD3-208	ENST00000575113	SOCS7	O14512	581 aa		33.11	■■■□□ 2.89
RFWD3-208	ENST00000575113	ADGRB3	O60242	1522 aa		33.09	■■■□□ 2.89
RFWD3-208	ENST00000575113	BCAN	Q96GW7	911 aa		33.08	■■■□□ 2.89
RFWD3-208	ENST00000575113	ALK	Q9UM73	1620 aa		33.08	■■■□□ 2.89
RFWD3-208	ENST00000575113	ITGAE	P38570	1179 aa		33.07	■■■□□ 2.88
RFWD3-208	ENST00000575113	ROCK1	Q13464	1354 aa		33.07	■■■□□ 2.88
RFWD3-208	ENST00000575113	SLC26A8	Q96RN1	970 aa		33.06	■■■□□ 2.88
RFWD3-208	ENST00000575113	SENP3	Q9H4L4	574 aa	Predicted RBP	33.06	■■■□□ 2.88
RFWD3-208	ENST00000575113	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.05	■■■□□ 2.88
RFWD3-208	ENST00000575113	TET3	O43151	1660 aa		33.04	■■■□□ 2.88
RFWD3-208	ENST00000575113	KCNA6	P17658	529 aa		33.01	■■■□□ 2.87
RFWD3-208	ENST00000575113	HDGF	P51858	240 aa	Known RBP	33	■■■□□ 2.87
RFWD3-208	ENST00000575113	UNC13B	O14795	1591 aa		33	■■■□□ 2.87
RFWD3-208	ENST00000575113	PPP1R15A	O75807	674 aa	Predicted RBP	32.98	■■■□□ 2.87
RFWD3-208	ENST00000575113	CHGA	P10645	457 aa	Known RBP	32.98	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms