RNA–Protein interactions for RNA: ENST00000574909.1

RNF213-219, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-219ENST00000574909 LRRIQ1Q96JM4 1722 aa11.99□□□□□ -0.49
RNF213-219ENST00000574909 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
RNF213-219ENST00000574909 SHANK2Q9UPX8 1470 aa11.98□□□□□ -0.49
RNF213-219ENST00000574909 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
RNF213-219ENST00000574909 ANKLE2Q86XL3 938 aa11.98□□□□□ -0.49
RNF213-219ENST00000574909 INO80Q9ULG1 1556 aaPredicted RBP11.97□□□□□ -0.49
RNF213-219ENST00000574909 THEMISQ8N1K5 641 aaPredicted RBP11.97□□□□□ -0.49
RNF213-219ENST00000574909 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
RNF213-219ENST00000574909 RTEL1-TNFRSF6BF6WH68 1400 aa11.96□□□□□ -0.49
RNF213-219ENST00000574909 DNMT1P26358 1616 aaKnown RBP11.96□□□□□ -0.5
RNF213-219ENST00000574909 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
RNF213-219ENST00000574909 TNRQ92752 1358 aa11.95□□□□□ -0.5
RNF213-219ENST00000574909 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
RNF213-219ENST00000574909 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
RNF213-219ENST00000574909 WASHC2CQ9Y4E1 1318 aa11.92□□□□□ -0.5
RNF213-219ENST00000574909 MED14O60244 1454 aa11.92□□□□□ -0.5
RNF213-219ENST00000574909 PZPP20742 1482 aa11.92□□□□□ -0.5
RNF213-219ENST00000574909 NLRP1Q9C000 1473 aa11.92□□□□□ -0.5
RNF213-219ENST00000574909 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
RNF213-219ENST00000574909 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
RNF213-219ENST00000574909 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
RNF213-219ENST00000574909 KIF3BO15066 747 aa11.9□□□□□ -0.5
RNF213-219ENST00000574909 NPHP4O75161 1426 aaPredicted RBP11.9□□□□□ -0.5
RNF213-219ENST00000574909 NEURL4Q96JN8 1562 aa11.9□□□□□ -0.5
RNF213-219ENST00000574909 MIA2Q96PC5 1412 aa11.9□□□□□ -0.5
RNF213-219ENST00000574909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNF213-219ENST00000574909 MBD5Q9P267 1494 aa11.89□□□□□ -0.51
RNF213-219ENST00000574909 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
RNF213-219ENST00000574909 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
RNF213-219ENST00000574909 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
RNF213-219ENST00000574909 UGGT1Q9NYU2 1555 aa11.88□□□□□ -0.51
RNF213-219ENST00000574909 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
RNF213-219ENST00000574909 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
RNF213-219ENST00000574909 CCDC141Q6ZP82 1450 aa11.85□□□□□ -0.51
RNF213-219ENST00000574909 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
RNF213-219ENST00000574909 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
RNF213-219ENST00000574909 CEP162Q5TB80 1403 aa11.85□□□□□ -0.51
RNF213-219ENST00000574909 SYNMO15061 1565 aa11.84□□□□□ -0.51
RNF213-219ENST00000574909 RNF17Q9BXT8 1623 aaKnown RBP11.83□□□□□ -0.52
RNF213-219ENST00000574909 EHBP1L1Q8N3D4 1523 aa11.83□□□□□ -0.52
RNF213-219ENST00000574909 LRRC7Q96NW7 1537 aa11.83□□□□□ -0.52
RNF213-219ENST00000574909 CENPBP07199 599 aaPredicted RBP11.83□□□□□ -0.52
RNF213-219ENST00000574909 TIAM1Q13009 1591 aa11.83□□□□□ -0.52
RNF213-219ENST00000574909 ALKQ9UM73 1620 aa11.82□□□□□ -0.52
RNF213-219ENST00000574909 IQGAP1P46940 1657 aa11.82□□□□□ -0.52
RNF213-219ENST00000574909 RGS17Q9UGC6 210 aaPredicted RBP11.78□□□□□ -0.52
RNF213-219ENST00000574909 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
RNF213-219ENST00000574909 FAM135BQ49AJ0 1406 aa11.77□□□□□ -0.52
RNF213-219ENST00000574909 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.52
RNF213-219ENST00000574909 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
RNF213-219ENST00000574909 ZC3H13Q5T200 1668 aaKnown RBP11.77□□□□□ -0.53
RNF213-219ENST00000574909 SCAF11Q99590 1463 aaKnown RBP11.76□□□□□ -0.53
RNF213-219ENST00000574909 ARHGEF5Q12774 1597 aa11.76□□□□□ -0.53
RNF213-219ENST00000574909 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
RNF213-219ENST00000574909 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
RNF213-219ENST00000574909 ABCC3O15438 1527 aa11.76□□□□□ -0.53
RNF213-219ENST00000574909 NCOA2Q15596 1464 aa11.75□□□□□ -0.53
RNF213-219ENST00000574909 SLIT1O75093 1534 aa11.73□□□□□ -0.53
RNF213-219ENST00000574909 ARHGAP23Q9P227 1491 aa11.73□□□□□ -0.53
RNF213-219ENST00000574909 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
RNF213-219ENST00000574909 EIF2AK4Q9P2K8 1649 aaKnown RBP11.72□□□□□ -0.53
RNF213-219ENST00000574909 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
RNF213-219ENST00000574909 LTKP29376 864 aa11.72□□□□□ -0.53
RNF213-219ENST00000574909 MAST1Q9Y2H9 1570 aa11.71□□□□□ -0.54
RNF213-219ENST00000574909 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
RNF213-219ENST00000574909 KCNA6P17658 529 aa11.7□□□□□ -0.54
RNF213-219ENST00000574909 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
RNF213-219ENST00000574909 CCER1Q8TC90 406 aaPredicted RBP11.7□□□□□ -0.54
RNF213-219ENST00000574909 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
RNF213-219ENST00000574909 UBR1Q8IWV7 1749 aa11.69□□□□□ -0.54
RNF213-219ENST00000574909 TMEM2Q9UHN6 1383 aa11.69□□□□□ -0.54
RNF213-219ENST00000574909 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
RNF213-219ENST00000574909 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
RNF213-219ENST00000574909 TMEM94Q12767 1356 aa11.68□□□□□ -0.54
RNF213-219ENST00000574909 DUOX2Q9NRD8 1548 aa11.68□□□□□ -0.54
RNF213-219ENST00000574909 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
RNF213-219ENST00000574909 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
RNF213-219ENST00000574909 MSH6P52701 1360 aa11.66□□□□□ -0.54
RNF213-219ENST00000574909 KANK1Q14678 1352 aa11.66□□□□□ -0.54
RNF213-219ENST00000574909 JCADQ9P266 1359 aa11.66□□□□□ -0.54
RNF213-219ENST00000574909 CLSPNQ9HAW4 1339 aa11.65□□□□□ -0.54
RNF213-219ENST00000574909 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
RNF213-219ENST00000574909 MROH1Q8NDA8 1641 aa11.64□□□□□ -0.55
RNF213-219ENST00000574909 NKTRP30414 1462 aaKnown RBP11.64□□□□□ -0.55
RNF213-219ENST00000574909 SLAIN2Q9P270 581 aa11.64□□□□□ -0.55
RNF213-219ENST00000574909 KDM5AP29375 1690 aaKnown RBP11.64□□□□□ -0.55
RNF213-219ENST00000574909 PRDM15P57071 1507 aaPredicted RBP11.64□□□□□ -0.55
RNF213-219ENST00000574909 ROBO1Q9Y6N7 1651 aa11.63□□□□□ -0.55
RNF213-219ENST00000574909 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
RNF213-219ENST00000574909 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
RNF213-219ENST00000574909 EFCAB6Q5THR3 1501 aa11.63□□□□□ -0.55
RNF213-219ENST00000574909 SPATA31A6Q5VVP1 1343 aa11.62□□□□□ -0.55
RNF213-219ENST00000574909 SLC52A1Q9NWF4 448 aa11.62□□□□□ -0.55
RNF213-219ENST00000574909 KIF15Q9NS87 1388 aa11.62□□□□□ -0.55
RNF213-219ENST00000574909 XIRP1Q702N8 1843 aaKnown RBP11.62□□□□□ -0.55
RNF213-219ENST00000574909 IDI1Q13907 227 aa11.61□□□□□ -0.55
RNF213-219ENST00000574909 BCANQ96GW7 911 aa11.61□□□□□ -0.55
RNF213-219ENST00000574909 SLC26A8Q96RN1 970 aa11.61□□□□□ -0.55
RNF213-219ENST00000574909 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
RNF213-219ENST00000574909 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms