RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-222ENST00000573667 ZC3H13Q5T200 1668 aaKnown RBP18.52■□□□□ 0.56
ABR-222ENST00000573667 MYO3AQ8NEV4 1616 aa18.52■□□□□ 0.55
ABR-222ENST00000573667 DAPK1P53355 1430 aa18.51■□□□□ 0.55
ABR-222ENST00000573667 STRCQ7RTU9 1775 aa18.51■□□□□ 0.55
ABR-222ENST00000573667 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
ABR-222ENST00000573667 ZNF142P52746 1687 aaPredicted RBP18.5■□□□□ 0.55
ABR-222ENST00000573667 ABCC5O15440 1437 aa18.49■□□□□ 0.55
ABR-222ENST00000573667 CEP152O94986 1710 aa18.48■□□□□ 0.55
ABR-222ENST00000573667 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
ABR-222ENST00000573667 PTPRKQ15262 1439 aa18.47■□□□□ 0.55
ABR-222ENST00000573667 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
ABR-222ENST00000573667 KIF15Q9NS87 1388 aa18.45■□□□□ 0.54
ABR-222ENST00000573667 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
ABR-222ENST00000573667 FAM50AQ14320 339 aaKnown RBP18.44■□□□□ 0.54
ABR-222ENST00000573667 ERBINQ96RT1 1412 aa18.43■□□□□ 0.54
ABR-222ENST00000573667 CAMSAP1Q5T5Y3 1602 aa18.43■□□□□ 0.54
ABR-222ENST00000573667 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
ABR-222ENST00000573667 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
ABR-222ENST00000573667 PZPP20742 1482 aa18.43■□□□□ 0.54
ABR-222ENST00000573667 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
ABR-222ENST00000573667 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
ABR-222ENST00000573667 ABCC3O15438 1527 aa18.41■□□□□ 0.54
ABR-222ENST00000573667 CHIC2Q9UKJ5 165 aa18.41■□□□□ 0.54
ABR-222ENST00000573667 DEPDC5O75140 1603 aa18.41■□□□□ 0.54
ABR-222ENST00000573667 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.54
ABR-222ENST00000573667 TNRQ92752 1358 aa18.37■□□□□ 0.53
ABR-222ENST00000573667 NCOA1Q15788 1441 aa18.37■□□□□ 0.53
ABR-222ENST00000573667 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
ABR-222ENST00000573667 ADGRL2O95490 1459 aa18.37■□□□□ 0.53
ABR-222ENST00000573667 POLR1AO95602 1720 aaPredicted RBP18.37■□□□□ 0.53
ABR-222ENST00000573667 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
ABR-222ENST00000573667 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
ABR-222ENST00000573667 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
ABR-222ENST00000573667 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
ABR-222ENST00000573667 PTPRTO14522 1441 aa18.34■□□□□ 0.53
ABR-222ENST00000573667 KANK1Q14678 1352 aa18.34■□□□□ 0.53
ABR-222ENST00000573667 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
ABR-222ENST00000573667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.52
ABR-222ENST00000573667 NLRP1Q9C000 1473 aa18.33■□□□□ 0.52
ABR-222ENST00000573667 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
ABR-222ENST00000573667 ERVK-7P63135 1459 aa18.3■□□□□ 0.52
ABR-222ENST00000573667 PKD2Q13563 968 aa18.29■□□□□ 0.52
ABR-222ENST00000573667 NCKAP5LQ9HCH0 1330 aa18.28■□□□□ 0.52
ABR-222ENST00000573667 FBXO41Q8TF61 875 aa18.28■□□□□ 0.52
ABR-222ENST00000573667 ANKRD50Q9ULJ7 1429 aa18.28■□□□□ 0.52
ABR-222ENST00000573667 ARHGAP31Q2M1Z3 1444 aa18.27■□□□□ 0.52
ABR-222ENST00000573667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.51
ABR-222ENST00000573667 VWDEQ8N2E2 1590 aa18.26■□□□□ 0.51
ABR-222ENST00000573667 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
ABR-222ENST00000573667 LMTK2Q8IWU2 1503 aa18.26■□□□□ 0.51
ABR-222ENST00000573667 UBR1Q8IWV7 1749 aa18.26■□□□□ 0.51
ABR-222ENST00000573667 ITGAEP38570 1179 aa18.25■□□□□ 0.51
ABR-222ENST00000573667 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
ABR-222ENST00000573667 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
ABR-222ENST00000573667 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
ABR-222ENST00000573667 UNC13BO14795 1591 aa18.24■□□□□ 0.51
ABR-222ENST00000573667 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
ABR-222ENST00000573667 TET3O43151 1660 aa18.22■□□□□ 0.51
ABR-222ENST00000573667 NEURL4Q96JN8 1562 aa18.21■□□□□ 0.51
ABR-222ENST00000573667 PIK3C2BO00750 1634 aa18.2■□□□□ 0.5
ABR-222ENST00000573667 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
ABR-222ENST00000573667 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
ABR-222ENST00000573667 IQGAP1P46940 1657 aa18.19■□□□□ 0.5
ABR-222ENST00000573667 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
ABR-222ENST00000573667 LTBP4Q8N2S1 1624 aa18.19■□□□□ 0.5
ABR-222ENST00000573667 IQGAP3Q86VI3 1631 aa18.17■□□□□ 0.5
ABR-222ENST00000573667 RPRD2Q5VT52 1461 aaKnown RBP18.16■□□□□ 0.5
ABR-222ENST00000573667 SYNMO15061 1565 aa18.16■□□□□ 0.5
ABR-222ENST00000573667 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
ABR-222ENST00000573667 E9PCH4 1651 aa18.15■□□□□ 0.5
ABR-222ENST00000573667 ZNF335Q9H4Z2 1342 aaPredicted RBP18.14■□□□□ 0.49
ABR-222ENST00000573667 MYO5BQ9ULV0 1848 aa18.14■□□□□ 0.49
ABR-222ENST00000573667 MED14O60244 1454 aa18.14■□□□□ 0.49
ABR-222ENST00000573667 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
ABR-222ENST00000573667 NPHP4O75161 1426 aaPredicted RBP18.13■□□□□ 0.49
ABR-222ENST00000573667 NOS1P29475 1434 aa18.12■□□□□ 0.49
ABR-222ENST00000573667 SLIT1O75093 1534 aa18.12■□□□□ 0.49
ABR-222ENST00000573667 ADGRB3O60242 1522 aa18.09■□□□□ 0.49
ABR-222ENST00000573667 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
ABR-222ENST00000573667 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.49
ABR-222ENST00000573667 NUP155O75694 1391 aa18.08■□□□□ 0.49
ABR-222ENST00000573667 IDI1Q13907 227 aa18.08■□□□□ 0.48
ABR-222ENST00000573667 SLC52A1Q9NWF4 448 aa18.08■□□□□ 0.48
ABR-222ENST00000573667 EID1Q9Y6B2 187 aa18.08■□□□□ 0.48
ABR-222ENST00000573667 CPS1P31327 1500 aa18.08■□□□□ 0.48
ABR-222ENST00000573667 SPHKAPQ2M3C7 1700 aa18.06■□□□□ 0.48
ABR-222ENST00000573667 TXNDC2Q86VQ3 553 aa18.06■□□□□ 0.48
ABR-222ENST00000573667 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
ABR-222ENST00000573667 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
ABR-222ENST00000573667 TMEM131LA2VDJ0 1609 aa18.03■□□□□ 0.48
ABR-222ENST00000573667 NAIPQ13075 1403 aa18.03■□□□□ 0.48
ABR-222ENST00000573667 LTKP29376 864 aa18.01■□□□□ 0.47
ABR-222ENST00000573667 HFM1A2PYH4 1435 aa17.99■□□□□ 0.47
ABR-222ENST00000573667 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
ABR-222ENST00000573667 KIF1BO60333 1816 aa17.98■□□□□ 0.47
ABR-222ENST00000573667 UBAP1LF5GYI3 381 aa17.97■□□□□ 0.47
ABR-222ENST00000573667 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
ABR-222ENST00000573667 TRIM52Q96A61 297 aa17.95■□□□□ 0.46
ABR-222ENST00000573667 BCANQ96GW7 911 aa17.95■□□□□ 0.46
ABR-222ENST00000573667 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms