RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
NPLOC4-212ENST00000573328 RNF17Q9BXT8 1623 aaKnown RBP15.1■□□□□ 0.01
NPLOC4-212ENST00000573328 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
NPLOC4-212ENST00000573328 PTPRKQ15262 1439 aa15.09■□□□□ 0.01
NPLOC4-212ENST00000573328 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
NPLOC4-212ENST00000573328 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
NPLOC4-212ENST00000573328 CEP152O94986 1710 aa15.09■□□□□ 0.01
NPLOC4-212ENST00000573328 DNMT1P26358 1616 aaKnown RBP15.07■□□□□ 0
NPLOC4-212ENST00000573328 CFAP65Q6ZU64 1925 aaKnown RBP15.07■□□□□ 0
NPLOC4-212ENST00000573328 NCOA1Q15788 1441 aa15.07■□□□□ 0
NPLOC4-212ENST00000573328 WASHC2CQ9Y4E1 1318 aa15.06■□□□□ 0
NPLOC4-212ENST00000573328 FGD6Q6ZV73 1430 aa15.05■□□□□ -0
NPLOC4-212ENST00000573328 SHANK2Q9UPX8 1470 aa15.05■□□□□ -0
NPLOC4-212ENST00000573328 DUOX2Q9NRD8 1548 aa15.05■□□□□ -0
NPLOC4-212ENST00000573328 POLR1AO95602 1720 aaPredicted RBP15.05■□□□□ -0
NPLOC4-212ENST00000573328 PZPP20742 1482 aa15.04■□□□□ -0
NPLOC4-212ENST00000573328 PTPRTO14522 1441 aa15.04■□□□□ -0
NPLOC4-212ENST00000573328 A2ML1A8K2U0 1454 aa15.02■□□□□ -0
NPLOC4-212ENST00000573328 DAPK1P53355 1430 aa15.02■□□□□ -0
NPLOC4-212ENST00000573328 CERKQ8TCT0 537 aa15.02■□□□□ -0
NPLOC4-212ENST00000573328 MROH1Q8NDA8 1641 aa15.02□□□□□ -0.01
NPLOC4-212ENST00000573328 ABCC3O15438 1527 aa15.02□□□□□ -0.01
NPLOC4-212ENST00000573328 TCOF1Q13428 1488 aaKnown RBP15.01□□□□□ -0.01
NPLOC4-212ENST00000573328 TNRQ92752 1358 aa15.01□□□□□ -0.01
NPLOC4-212ENST00000573328 KIF15Q9NS87 1388 aa15.01□□□□□ -0.01
NPLOC4-212ENST00000573328 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
NPLOC4-212ENST00000573328 ABCC5O15440 1437 aa15□□□□□ -0.01
NPLOC4-212ENST00000573328 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
NPLOC4-212ENST00000573328 NCKAP5LQ9HCH0 1330 aa14.98□□□□□ -0.01
NPLOC4-212ENST00000573328 ERBINQ96RT1 1412 aa14.98□□□□□ -0.01
NPLOC4-212ENST00000573328 PRDM15P57071 1507 aaPredicted RBP14.97□□□□□ -0.01
NPLOC4-212ENST00000573328 DEPDC5O75140 1603 aa14.97□□□□□ -0.01
NPLOC4-212ENST00000573328 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
NPLOC4-212ENST00000573328 FAM50AQ14320 339 aaKnown RBP14.96□□□□□ -0.01
NPLOC4-212ENST00000573328 UGGT1Q9NYU2 1555 aa14.96□□□□□ -0.01
NPLOC4-212ENST00000573328 CHIC2Q9UKJ5 165 aa14.96□□□□□ -0.01
NPLOC4-212ENST00000573328 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
NPLOC4-212ENST00000573328 SPATA31D1Q6ZQQ2 1576 aa14.95□□□□□ -0.02
NPLOC4-212ENST00000573328 PKD2Q13563 968 aa14.95□□□□□ -0.02
NPLOC4-212ENST00000573328 ANKRD30AQ9BXX3 1397 aa14.95□□□□□ -0.02
NPLOC4-212ENST00000573328 LTBP4Q8N2S1 1624 aa14.94□□□□□ -0.02
NPLOC4-212ENST00000573328 ERVK-7P63135 1459 aa14.94□□□□□ -0.02
NPLOC4-212ENST00000573328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.021e-7■■□□□ 12.6
NPLOC4-212ENST00000573328 KANK1Q14678 1352 aa14.92□□□□□ -0.02
NPLOC4-212ENST00000573328 NEURL4Q96JN8 1562 aa14.92□□□□□ -0.02
NPLOC4-212ENST00000573328 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
NPLOC4-212ENST00000573328 ADGRL2O95490 1459 aa14.9□□□□□ -0.02
NPLOC4-212ENST00000573328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.9□□□□□ -0.02
NPLOC4-212ENST00000573328 IQGAP1P46940 1657 aa14.89□□□□□ -0.03
NPLOC4-212ENST00000573328 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-212ENST00000573328 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
NPLOC4-212ENST00000573328 THEMISQ8N1K5 641 aaPredicted RBP14.88□□□□□ -0.03
NPLOC4-212ENST00000573328 PIK3C2BO00750 1634 aa14.86□□□□□ -0.03
NPLOC4-212ENST00000573328 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
NPLOC4-212ENST00000573328 ARHGAP31Q2M1Z3 1444 aa14.85□□□□□ -0.03
NPLOC4-212ENST00000573328 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
NPLOC4-212ENST00000573328 EFCAB6Q5THR3 1501 aa14.85□□□□□ -0.03
NPLOC4-212ENST00000573328 VWDEQ8N2E2 1590 aa14.85□□□□□ -0.03
NPLOC4-212ENST00000573328 LMTK2Q8IWU2 1503 aa14.84□□□□□ -0.03
NPLOC4-212ENST00000573328 GCC2Q8IWJ2 1684 aa14.84□□□□□ -0.03
NPLOC4-212ENST00000573328 NPHP4O75161 1426 aaPredicted RBP14.83□□□□□ -0.03
NPLOC4-212ENST00000573328 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.03
NPLOC4-212ENST00000573328 TET3O43151 1660 aa14.83□□□□□ -0.04
NPLOC4-212ENST00000573328 MED14O60244 1454 aa14.82□□□□□ -0.04
NPLOC4-212ENST00000573328 CPS1P31327 1500 aa14.82□□□□□ -0.04
NPLOC4-212ENST00000573328 UNC13BO14795 1591 aa14.81□□□□□ -0.04
NPLOC4-212ENST00000573328 KDM5AP29375 1690 aaKnown RBP14.81□□□□□ -0.04
NPLOC4-212ENST00000573328 SYNMO15061 1565 aa14.81□□□□□ -0.04
NPLOC4-212ENST00000573328 ITGAEP38570 1179 aa14.8□□□□□ -0.04
NPLOC4-212ENST00000573328 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
NPLOC4-212ENST00000573328 MYO5BQ9ULV0 1848 aa14.8□□□□□ -0.04
NPLOC4-212ENST00000573328 SCAF11Q99590 1463 aaKnown RBP14.79□□□□□ -0.04
NPLOC4-212ENST00000573328 STRCP1A6NGW2 1772 aa14.78□□□□□ -0.04
NPLOC4-212ENST00000573328 SLIT1O75093 1534 aa14.78□□□□□ -0.04
NPLOC4-212ENST00000573328 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
NPLOC4-212ENST00000573328 ADGRB3O60242 1522 aa14.76□□□□□ -0.05
NPLOC4-212ENST00000573328 E9PCH4 1651 aa14.76□□□□□ -0.05
NPLOC4-212ENST00000573328 IQGAP3Q86VI3 1631 aa14.76□□□□□ -0.05
NPLOC4-212ENST00000573328 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
NPLOC4-212ENST00000573328 ARHGAP23Q9P227 1491 aa14.76□□□□□ -0.05
NPLOC4-212ENST00000573328 ROCK1Q13464 1354 aa14.75□□□□□ -0.05
NPLOC4-212ENST00000573328 EID1Q9Y6B2 187 aa14.75□□□□□ -0.05
NPLOC4-212ENST00000573328 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
NPLOC4-212ENST00000573328 NOS1P29475 1434 aa14.74□□□□□ -0.05
NPLOC4-212ENST00000573328 TXNDC2Q86VQ3 553 aa14.73□□□□□ -0.05
NPLOC4-212ENST00000573328 IDI1Q13907 227 aa14.72□□□□□ -0.05
NPLOC4-212ENST00000573328 TMEM2Q9UHN6 1383 aa14.72□□□□□ -0.05
NPLOC4-212ENST00000573328 LTKP29376 864 aa14.71□□□□□ -0.05
NPLOC4-212ENST00000573328 SLC52A1Q9NWF4 448 aa14.69□□□□□ -0.06
NPLOC4-212ENST00000573328 SPHKAPQ2M3C7 1700 aa14.69□□□□□ -0.06
NPLOC4-212ENST00000573328 XIRP1Q702N8 1843 aaKnown RBP14.69□□□□□ -0.06
NPLOC4-212ENST00000573328 TMEM131LA2VDJ0 1609 aa14.68□□□□□ -0.06
NPLOC4-212ENST00000573328 TOM1O60784 492 aa14.68□□□□□ -0.06
NPLOC4-212ENST00000573328 PIP4K2BP78356 416 aa14.68□□□□□ -0.06
NPLOC4-212ENST00000573328 NUP155O75694 1391 aa14.68□□□□□ -0.06
NPLOC4-212ENST00000573328 RRBP1Q9P2E9 1410 aaKnown RBP14.67□□□□□ -0.06
NPLOC4-212ENST00000573328 LRRC7Q96NW7 1537 aa14.67□□□□□ -0.06
NPLOC4-212ENST00000573328 DISP3Q9P2K9 1392 aa14.66□□□□□ -0.06
NPLOC4-212ENST00000573328 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
NPLOC4-212ENST00000573328 BCANQ96GW7 911 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms