RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 DUOX2Q9NRD8 1548 aa25.05■■□□□ 1.6
NDE1-205ENST00000572756 UHRF1BP1Q6BDS2 1440 aa25.04■■□□□ 1.6
NDE1-205ENST00000572756 KDM5DQ9BY66 1539 aa25.03■■□□□ 1.6
NDE1-205ENST00000572756 PTPRKQ15262 1439 aa25.02■■□□□ 1.6
NDE1-205ENST00000572756 KIF15Q9NS87 1388 aa25.01■■□□□ 1.59
NDE1-205ENST00000572756 MROH1Q8NDA8 1641 aa25■■□□□ 1.59
NDE1-205ENST00000572756 ERBINQ96RT1 1412 aa24.97■■□□□ 1.59
NDE1-205ENST00000572756 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
NDE1-205ENST00000572756 ZC3H13Q5T200 1668 aaKnown RBP24.95■■□□□ 1.58
NDE1-205ENST00000572756 FAM50AQ14320 339 aaKnown RBP24.95■■□□□ 1.58
NDE1-205ENST00000572756 RRP7BPQ9NSQ0 103 aa24.95■■□□□ 1.58
NDE1-205ENST00000572756 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
NDE1-205ENST00000572756 ANKRD30AQ9BXX3 1397 aa24.94■■□□□ 1.58
NDE1-205ENST00000572756 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
NDE1-205ENST00000572756 WASHC2CQ9Y4E1 1318 aa24.94■■□□□ 1.58
NDE1-205ENST00000572756 ABCC3O15438 1527 aa24.94■■□□□ 1.58
NDE1-205ENST00000572756 PZPP20742 1482 aa24.94■■□□□ 1.58
NDE1-205ENST00000572756 ZNF142P52746 1687 aaPredicted RBP24.94■■□□□ 1.58
NDE1-205ENST00000572756 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
NDE1-205ENST00000572756 PPARGC1BQ86YN6 1023 aaKnown RBP24.92■■□□□ 1.58
NDE1-205ENST00000572756 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
NDE1-205ENST00000572756 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
NDE1-205ENST00000572756 DEPDC5O75140 1603 aa24.91■■□□□ 1.58
NDE1-205ENST00000572756 CEP152O94986 1710 aa24.89■■□□□ 1.58
NDE1-205ENST00000572756 CEP170BQ9Y4F5 1589 aaPredicted RBP24.87■■□□□ 1.57
NDE1-205ENST00000572756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.86■■□□□ 1.57
NDE1-205ENST00000572756 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
NDE1-205ENST00000572756 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
NDE1-205ENST00000572756 TNRQ92752 1358 aa24.83■■□□□ 1.57
NDE1-205ENST00000572756 A2ML1A8K2U0 1454 aa24.82■■□□□ 1.56
NDE1-205ENST00000572756 VWDEQ8N2E2 1590 aa24.81■■□□□ 1.56
NDE1-205ENST00000572756 SPATA31D1Q6ZQQ2 1576 aa24.8■■□□□ 1.56
NDE1-205ENST00000572756 ROCK1Q13464 1354 aa24.79■■□□□ 1.56
NDE1-205ENST00000572756 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
NDE1-205ENST00000572756 ANKRD50Q9ULJ7 1429 aa24.78■■□□□ 1.56
NDE1-205ENST00000572756 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
NDE1-205ENST00000572756 ERVK-7P63135 1459 aa24.77■■□□□ 1.56
NDE1-205ENST00000572756 PLA2R1Q13018 1463 aa24.77■■□□□ 1.56
NDE1-205ENST00000572756 LMTK2Q8IWU2 1503 aa24.77■■□□□ 1.56
NDE1-205ENST00000572756 CFAP65Q6ZU64 1925 aaKnown RBP24.77■■□□□ 1.56
NDE1-205ENST00000572756 PTPRTO14522 1441 aa24.76■■□□□ 1.55
NDE1-205ENST00000572756 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
NDE1-205ENST00000572756 DMRT2Q9Y5R5 561 aa24.75■■□□□ 1.55
NDE1-205ENST00000572756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.74■■□□□ 1.552e-8■■□□□ 13.1
NDE1-205ENST00000572756 KANK1Q14678 1352 aa24.74■■□□□ 1.55
NDE1-205ENST00000572756 UNC13BO14795 1591 aa24.7■■□□□ 1.54
NDE1-205ENST00000572756 EFCAB6Q5THR3 1501 aa24.68■■□□□ 1.54
NDE1-205ENST00000572756 UGGT1Q9NYU2 1555 aa24.67■■□□□ 1.54
NDE1-205ENST00000572756 NCKAP5LQ9HCH0 1330 aa24.67■■□□□ 1.54
NDE1-205ENST00000572756 ITGAEP38570 1179 aa24.67■■□□□ 1.54
NDE1-205ENST00000572756 PKD2Q13563 968 aa24.67■■□□□ 1.54
NDE1-205ENST00000572756 POLR1AO95602 1720 aaPredicted RBP24.66■■□□□ 1.54
NDE1-205ENST00000572756 TET3O43151 1660 aa24.63■■□□□ 1.53
NDE1-205ENST00000572756 ILDR1Q86SU0 546 aaPredicted RBP24.63■■□□□ 1.53
NDE1-205ENST00000572756 UBR1Q8IWV7 1749 aa24.63■■□□□ 1.53
NDE1-205ENST00000572756 NEURL4Q96JN8 1562 aa24.62■■□□□ 1.53
NDE1-205ENST00000572756 THEMISQ8N1K5 641 aaPredicted RBP24.61■■□□□ 1.53
NDE1-205ENST00000572756 GCC2Q8IWJ2 1684 aa24.61■■□□□ 1.53
NDE1-205ENST00000572756 SYNMO15061 1565 aa24.6■■□□□ 1.53
NDE1-205ENST00000572756 IQGAP3Q86VI3 1631 aa24.6■■□□□ 1.53
NDE1-205ENST00000572756 NOS1P29475 1434 aa24.6■■□□□ 1.53
NDE1-205ENST00000572756 RPRD2Q5VT52 1461 aaKnown RBP24.59■■□□□ 1.53
NDE1-205ENST00000572756 LTBP4Q8N2S1 1624 aa24.57■■□□□ 1.52
NDE1-205ENST00000572756 PIK3C2BO00750 1634 aa24.57■■□□□ 1.52
NDE1-205ENST00000572756 CERKQ8TCT0 537 aa24.56■■□□□ 1.52
NDE1-205ENST00000572756 KDM5AP29375 1690 aaKnown RBP24.55■■□□□ 1.52
NDE1-205ENST00000572756 MED14O60244 1454 aa24.54■■□□□ 1.52
NDE1-205ENST00000572756 NAIPQ13075 1403 aa24.53■■□□□ 1.52
NDE1-205ENST00000572756 E9PCH4 1651 aa24.53■■□□□ 1.52
NDE1-205ENST00000572756 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
NDE1-205ENST00000572756 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
NDE1-205ENST00000572756 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
NDE1-205ENST00000572756 SLIT1O75093 1534 aa24.51■■□□□ 1.51
NDE1-205ENST00000572756 NUP155O75694 1391 aa24.5■■□□□ 1.51
NDE1-205ENST00000572756 IDI1Q13907 227 aa24.49■■□□□ 1.51
NDE1-205ENST00000572756 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
NDE1-205ENST00000572756 IQGAP1P46940 1657 aa24.48■■□□□ 1.51
NDE1-205ENST00000572756 NPHP4O75161 1426 aaPredicted RBP24.47■■□□□ 1.51
NDE1-205ENST00000572756 ZNF335Q9H4Z2 1342 aaPredicted RBP24.47■■□□□ 1.51
NDE1-205ENST00000572756 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
NDE1-205ENST00000572756 ADGRB3O60242 1522 aa24.45■■□□□ 1.51
NDE1-205ENST00000572756 SCAF11Q99590 1463 aaKnown RBP24.45■■□□□ 1.5
NDE1-205ENST00000572756 TMEM2Q9UHN6 1383 aa24.42■■□□□ 1.5
NDE1-205ENST00000572756 LTKP29376 864 aa24.42■■□□□ 1.5
NDE1-205ENST00000572756 IQSEC2Q5JU85 1478 aa24.42■■□□□ 1.5
NDE1-205ENST00000572756 MYO5BQ9ULV0 1848 aa24.42■■□□□ 1.5
NDE1-205ENST00000572756 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.49
NDE1-205ENST00000572756 TMEM131LA2VDJ0 1609 aa24.39■■□□□ 1.49
NDE1-205ENST00000572756 TXNDC2Q86VQ3 553 aa24.38■■□□□ 1.49
NDE1-205ENST00000572756 SPHKAPQ2M3C7 1700 aa24.37■■□□□ 1.49
NDE1-205ENST00000572756 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
NDE1-205ENST00000572756 CPS1P31327 1500 aa24.35■■□□□ 1.49
NDE1-205ENST00000572756 STRCP1A6NGW2 1772 aa24.33■■□□□ 1.49
NDE1-205ENST00000572756 ZFYVE9O95405 1425 aa24.32■■□□□ 1.48
NDE1-205ENST00000572756 RIMS2Q9UQ26 1411 aa24.27■■□□□ 1.48
NDE1-205ENST00000572756 TRPM2O94759 1503 aa24.26■■□□□ 1.47
NDE1-205ENST00000572756 TRIM52Q96A61 297 aa24.25■■□□□ 1.47
NDE1-205ENST00000572756 CLTCL1P53675 1640 aa24.24■■□□□ 1.47
NDE1-205ENST00000572756 CHGAP10645 457 aaKnown RBP24.22■■□□□ 1.47
NDE1-205ENST00000572756 PLEKHG1Q9ULL1 1385 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms