RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 P3H3Q8IVL6 736 aa9.14□□□□□ -0.95
CDC27-213ENST00000571643 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
CDC27-213ENST00000571643 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
CDC27-213ENST00000571643 ZBED2Q9BTP6 218 aa9.11□□□□□ -0.95
CDC27-213ENST00000571643 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
CDC27-213ENST00000571643 ADAM33Q9BZ11 813 aa9.1□□□□□ -0.95
CDC27-213ENST00000571643 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
CDC27-213ENST00000571643 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
CDC27-213ENST00000571643 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
CDC27-213ENST00000571643 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
CDC27-213ENST00000571643 STAC3Q96MF2 364 aa9.07□□□□□ -0.96
CDC27-213ENST00000571643 NBR1Q14596 966 aa9.06□□□□□ -0.96
CDC27-213ENST00000571643 DDX12PQ92771 950 aa9.06□□□□□ -0.96
CDC27-213ENST00000571643 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
CDC27-213ENST00000571643 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
CDC27-213ENST00000571643 EN1Q05925 392 aaPredicted RBP9.04□□□□□ -0.96
CDC27-213ENST00000571643 NBPF3Q9H094 633 aa9.04□□□□□ -0.96
CDC27-213ENST00000571643 MAP3K7O43318 606 aa9.02□□□□□ -0.97
CDC27-213ENST00000571643 C6orf132Q5T0Z8 1188 aa9.02□□□□□ -0.97
CDC27-213ENST00000571643 ONECUT3O60422 494 aaPredicted RBP9.01□□□□□ -0.97
CDC27-213ENST00000571643 RGS20O76081 388 aa9.01□□□□□ -0.97
CDC27-213ENST00000571643 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
CDC27-213ENST00000571643 GRXCR2A6NFK2 248 aa9□□□□□ -0.97
CDC27-213ENST00000571643 CERKQ8TCT0 537 aa9□□□□□ -0.97
CDC27-213ENST00000571643 RBM33Q96EV2 1170 aaKnown RBP9□□□□□ -0.97
CDC27-213ENST00000571643 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
CDC27-213ENST00000571643 WNT2BQ93097 391 aa8.98□□□□□ -0.97
CDC27-213ENST00000571643 COL9A1P20849 921 aa8.97□□□□□ -0.97
CDC27-213ENST00000571643 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
CDC27-213ENST00000571643 VSIG10Q8N0Z9 540 aa8.97□□□□□ -0.97
CDC27-213ENST00000571643 GOLGA8CPA6NN73 597 aa8.96□□□□□ -0.98
CDC27-213ENST00000571643 PTPN5P54829 565 aa8.96□□□□□ -0.98
CDC27-213ENST00000571643 TRIM6-TRIM34B2RNG4 842 aa8.94□□□□□ -0.98
CDC27-213ENST00000571643 OSBPP22059 807 aa8.94□□□□□ -0.98
CDC27-213ENST00000571643 A0A0G2JS52 829 aa8.93□□□□□ -0.98
CDC27-213ENST00000571643 TSR1Q2NL82 804 aaKnown RBP8.93□□□□□ -0.98
CDC27-213ENST00000571643 PROX2Q3B8N5 592 aa8.93□□□□□ -0.98
CDC27-213ENST00000571643 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
CDC27-213ENST00000571643 ITGBL1O95965 494 aaPredicted RBP8.92□□□□□ -0.98
CDC27-213ENST00000571643 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
CDC27-213ENST00000571643 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
CDC27-213ENST00000571643 SMYD5Q6GMV2 418 aa8.91□□□□□ -0.98
CDC27-213ENST00000571643 PACS2Q86VP3 889 aa8.91□□□□□ -0.98
CDC27-213ENST00000571643 KIAA1468Q9P260 1216 aa8.9□□□□□ -0.98
CDC27-213ENST00000571643 SOWAHBA6NEL2 793 aa8.89□□□□□ -0.99
CDC27-213ENST00000571643 PRSS12P56730 875 aa8.89□□□□□ -0.99
CDC27-213ENST00000571643 NBPF26B4DH59 902 aa8.88□□□□□ -0.99
CDC27-213ENST00000571643 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
CDC27-213ENST00000571643 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
CDC27-213ENST00000571643 PRIM1P49642 420 aaKnown RBP8.87□□□□□ -0.99
CDC27-213ENST00000571643 FAM98CQ17RN3 349 aaKnown RBP8.87□□□□□ -0.99
CDC27-213ENST00000571643 KDM2AQ9Y2K7 1162 aa8.87□□□□□ -0.99
CDC27-213ENST00000571643 ZFRQ96KR1 1074 aaKnown RBP8.86□□□□□ -0.99
CDC27-213ENST00000571643 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
CDC27-213ENST00000571643 SEMA3EO15041 775 aa8.85□□□□□ -0.99
CDC27-213ENST00000571643 TSKSQ9UJT2 592 aa8.85□□□□□ -0.99
CDC27-213ENST00000571643 TESPA1A2RU30 521 aaPredicted RBP8.84□□□□□ -0.99
CDC27-213ENST00000571643 TULP1O00294 542 aaPredicted RBP8.83□□□□□ -1
CDC27-213ENST00000571643 BCAMP50895 628 aa8.83□□□□□ -1
CDC27-213ENST00000571643 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
CDC27-213ENST00000571643 LRCH3Q96II8 777 aa8.81□□□□□ -1
CDC27-213ENST00000571643 NUTM2FA1L443 756 aa8.8□□□□□ -1
CDC27-213ENST00000571643 FCHSD2O94868 740 aa8.8□□□□□ -1
CDC27-213ENST00000571643 PTGDRQ13258 359 aa8.8□□□□□ -1
CDC27-213ENST00000571643 TTC13Q8NBP0 860 aa8.8□□□□□ -1
CDC27-213ENST00000571643 TATDN2Q93075 761 aa8.8□□□□□ -1
CDC27-213ENST00000571643 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
CDC27-213ENST00000571643 PNMA3Q9UL41 463 aa8.8□□□□□ -1
CDC27-213ENST00000571643 PADI6Q6TGC4 694 aa8.79□□□□□ -1
CDC27-213ENST00000571643 NECTIN2Q92692 538 aa8.79□□□□□ -1
CDC27-213ENST00000571643 WBP1LQ9NX94 342 aa8.79□□□□□ -1
CDC27-213ENST00000571643 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.79□□□□□ -1
CDC27-213ENST00000571643 HDGFP51858 240 aaKnown RBP8.78□□□□□ -1
CDC27-213ENST00000571643 IRX2Q9BZI1 471 aaPredicted RBP8.77□□□□□ -1.01
CDC27-213ENST00000571643 FAM198AQ9UFP1 575 aa8.77□□□□□ -1.01
CDC27-213ENST00000571643 TSR3Q9UJK0 312 aaKnown RBP8.77□□□□□ -1.01
CDC27-213ENST00000571643 SLC4A3P48751 1232 aa8.76□□□□□ -1.01
CDC27-213ENST00000571643 HIC1Q14526 733 aa8.76□□□□□ -1.01
CDC27-213ENST00000571643 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
CDC27-213ENST00000571643 KCNC4Q03721 635 aa8.74□□□□□ -1.01
CDC27-213ENST00000571643 RBM46Q8TBY0 533 aaKnown RBP8.74□□□□□ -1.01
CDC27-213ENST00000571643 SMAPO00193 183 aa8.73□□□□□ -1.01
CDC27-213ENST00000571643 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
CDC27-213ENST00000571643 PPP4CP60510 307 aa8.71□□□□□ -1.02
CDC27-213ENST00000571643 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.02
CDC27-213ENST00000571643 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
CDC27-213ENST00000571643 GPIHBP1Q8IV16 184 aa8.71□□□□□ -1.02
CDC27-213ENST00000571643 SLF2Q8IX21 1173 aa8.71□□□□□ -1.02
CDC27-213ENST00000571643 DNAJB2P25686 324 aa8.7□□□□□ -1.02
CDC27-213ENST00000571643 GNPATO15228 680 aa8.69□□□□□ -1.02
CDC27-213ENST00000571643 OATP04181 439 aa8.69□□□□□ -1.02
CDC27-213ENST00000571643 EYA1Q99502 592 aa8.69□□□□□ -1.02
CDC27-213ENST00000571643 ADGRG1Q9Y653 693 aa8.69□□□□□ -1.02
CDC27-213ENST00000571643 C3orf80F5H4A9 247 aa8.68□□□□□ -1.02
CDC27-213ENST00000571643 RNF40O75150 1001 aa8.67□□□□□ -1.02
CDC27-213ENST00000571643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
CDC27-213ENST00000571643 TJAP1Q5JTD0 557 aa8.66□□□□□ -1.02
CDC27-213ENST00000571643 SWT1Q5T5J6 900 aaKnown RBP8.66□□□□□ -1.02
CDC27-213ENST00000571643 PRR14Q9BWN1 585 aa8.66□□□□□ -1.02
CDC27-213ENST00000571643 GPR37O15354 613 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms