RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 ABCC5O15440 1437 aa26.79■■□□□ 1.88
RPA1-203ENST00000571058 DUOX2Q9NRD8 1548 aa26.79■■□□□ 1.88
RPA1-203ENST00000571058 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
RPA1-203ENST00000571058 RNF17Q9BXT8 1623 aaKnown RBP26.78■■□□□ 1.88
RPA1-203ENST00000571058 DAPK1P53355 1430 aa26.77■■□□□ 1.88
RPA1-203ENST00000571058 WASHC2CQ9Y4E1 1318 aa26.77■■□□□ 1.88
RPA1-203ENST00000571058 STRCQ7RTU9 1775 aa26.74■■□□□ 1.87
RPA1-203ENST00000571058 MYO3AQ8NEV4 1616 aa26.72■■□□□ 1.87
RPA1-203ENST00000571058 KIF15Q9NS87 1388 aa26.72■■□□□ 1.87
RPA1-203ENST00000571058 PZPP20742 1482 aa26.72■■□□□ 1.87
RPA1-203ENST00000571058 ZNF142P52746 1687 aaPredicted RBP26.72■■□□□ 1.87
RPA1-203ENST00000571058 ZC3H13Q5T200 1668 aaKnown RBP26.72■■□□□ 1.87
RPA1-203ENST00000571058 ERBINQ96RT1 1412 aa26.71■■□□□ 1.87
RPA1-203ENST00000571058 ANKRD30AQ9BXX3 1397 aa26.69■■□□□ 1.86
RPA1-203ENST00000571058 CEP170BQ9Y4F5 1589 aaPredicted RBP26.68■■□□□ 1.86
RPA1-203ENST00000571058 ILDR1Q86SU0 546 aaPredicted RBP26.68■■□□□ 1.86
RPA1-203ENST00000571058 NCOA1Q15788 1441 aa26.67■■□□□ 1.86
RPA1-203ENST00000571058 PTPRTO14522 1441 aa26.66■■□□□ 1.86
RPA1-203ENST00000571058 RRP7BPQ9NSQ0 103 aa26.66■■□□□ 1.86
RPA1-203ENST00000571058 ABCC3O15438 1527 aa26.65■■□□□ 1.86
RPA1-203ENST00000571058 TNRQ92752 1358 aa26.65■■□□□ 1.86
RPA1-203ENST00000571058 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
RPA1-203ENST00000571058 A2ML1A8K2U0 1454 aa26.64■■□□□ 1.86
RPA1-203ENST00000571058 FAM50AQ14320 339 aaKnown RBP26.64■■□□□ 1.86
RPA1-203ENST00000571058 MROH1Q8NDA8 1641 aa26.64■■□□□ 1.85
RPA1-203ENST00000571058 PLA2R1Q13018 1463 aa26.63■■□□□ 1.85
RPA1-203ENST00000571058 ADGRL2O95490 1459 aa26.62■■□□□ 1.85
RPA1-203ENST00000571058 PRDM15P57071 1507 aaPredicted RBP26.61■■□□□ 1.85
RPA1-203ENST00000571058 FBXO31Q5XUX0 539 aaPredicted RBP26.6■■□□□ 1.85
RPA1-203ENST00000571058 FBXO41Q8TF61 875 aa26.6■■□□□ 1.85
RPA1-203ENST00000571058 CHIC2Q9UKJ5 165 aa26.59■■□□□ 1.85
RPA1-203ENST00000571058 NLRP1Q9C000 1473 aa26.58■■□□□ 1.85
RPA1-203ENST00000571058 PKD2Q13563 968 aa26.58■■□□□ 1.85
RPA1-203ENST00000571058 DEPDC5O75140 1603 aa26.57■■□□□ 1.84
RPA1-203ENST00000571058 KANK1Q14678 1352 aa26.56■■□□□ 1.84
RPA1-203ENST00000571058 CEP152O94986 1710 aa26.56■■□□□ 1.84
RPA1-203ENST00000571058 SPATA31D1Q6ZQQ2 1576 aa26.54■■□□□ 1.84
RPA1-203ENST00000571058 CERKQ8TCT0 537 aa26.53■■□□□ 1.84
RPA1-203ENST00000571058 ARHGAP31Q2M1Z3 1444 aa26.53■■□□□ 1.84
RPA1-203ENST00000571058 ERVK-7P63135 1459 aa26.5■■□□□ 1.83
RPA1-203ENST00000571058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.5■■□□□ 1.83
RPA1-203ENST00000571058 NCKAP5LQ9HCH0 1330 aa26.49■■□□□ 1.83
RPA1-203ENST00000571058 THEMISQ8N1K5 641 aaPredicted RBP26.49■■□□□ 1.83
RPA1-203ENST00000571058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.48■■□□□ 1.83
RPA1-203ENST00000571058 ANKRD50Q9ULJ7 1429 aa26.48■■□□□ 1.83
RPA1-203ENST00000571058 UGGT1Q9NYU2 1555 aa26.47■■□□□ 1.83
RPA1-203ENST00000571058 LMTK2Q8IWU2 1503 aa26.47■■□□□ 1.83
RPA1-203ENST00000571058 VWDEQ8N2E2 1590 aa26.46■■□□□ 1.83
RPA1-203ENST00000571058 ROCK1Q13464 1354 aa26.46■■□□□ 1.83
RPA1-203ENST00000571058 POLR1AO95602 1720 aaPredicted RBP26.43■■□□□ 1.82
RPA1-203ENST00000571058 CFAP65Q6ZU64 1925 aaKnown RBP26.43■■□□□ 1.82
RPA1-203ENST00000571058 ANKLE2Q86XL3 938 aa26.41■■□□□ 1.82
RPA1-203ENST00000571058 PPARGC1BQ86YN6 1023 aaKnown RBP26.39■■□□□ 1.82
RPA1-203ENST00000571058 LTBP4Q8N2S1 1624 aa26.39■■□□□ 1.81
RPA1-203ENST00000571058 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
RPA1-203ENST00000571058 EFCAB6Q5THR3 1501 aa26.36■■□□□ 1.81
RPA1-203ENST00000571058 NEURL4Q96JN8 1562 aa26.35■■□□□ 1.81
RPA1-203ENST00000571058 MED14O60244 1454 aa26.34■■□□□ 1.81
RPA1-203ENST00000571058 UBR1Q8IWV7 1749 aa26.34■■□□□ 1.81
RPA1-203ENST00000571058 RRBP1Q9P2E9 1410 aaKnown RBP26.33■■□□□ 1.81
RPA1-203ENST00000571058 RPRD2Q5VT52 1461 aaKnown RBP26.33■■□□□ 1.81
RPA1-203ENST00000571058 UNC13BO14795 1591 aa26.32■■□□□ 1.8
RPA1-203ENST00000571058 ITGAEP38570 1179 aa26.3■■□□□ 1.8
RPA1-203ENST00000571058 ZNF335Q9H4Z2 1342 aaPredicted RBP26.3■■□□□ 1.8
RPA1-203ENST00000571058 TET3O43151 1660 aa26.29■■□□□ 1.8
RPA1-203ENST00000571058 KDM5AP29375 1690 aaKnown RBP26.29■■□□□ 1.8
RPA1-203ENST00000571058 NPHP4O75161 1426 aaPredicted RBP26.29■■□□□ 1.8
RPA1-203ENST00000571058 NOS1P29475 1434 aa26.29■■□□□ 1.8
RPA1-203ENST00000571058 SLIT1O75093 1534 aa26.26■■□□□ 1.79
RPA1-203ENST00000571058 GCC2Q8IWJ2 1684 aa26.25■■□□□ 1.79
RPA1-203ENST00000571058 PIK3C2BO00750 1634 aa26.25■■□□□ 1.79
RPA1-203ENST00000571058 ARHGAP23Q9P227 1491 aa26.25■■□□□ 1.79
RPA1-203ENST00000571058 SLC52A1Q9NWF4 448 aa26.25■■□□□ 1.79
RPA1-203ENST00000571058 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
RPA1-203ENST00000571058 STAG3Q9UJ98 1225 aa26.24■■□□□ 1.79
RPA1-203ENST00000571058 SYNMO15061 1565 aa26.24■■□□□ 1.79
RPA1-203ENST00000571058 SCAF11Q99590 1463 aaKnown RBP26.23■■□□□ 1.79
RPA1-203ENST00000571058 IQGAP3Q86VI3 1631 aa26.22■■□□□ 1.79
RPA1-203ENST00000571058 IDI1Q13907 227 aa26.22■■□□□ 1.79
RPA1-203ENST00000571058 CPS1P31327 1500 aa26.21■■□□□ 1.79
RPA1-203ENST00000571058 EID1Q9Y6B2 187 aa26.21■■□□□ 1.79
RPA1-203ENST00000571058 TMEM2Q9UHN6 1383 aa26.2■■□□□ 1.78
RPA1-203ENST00000571058 TXNDC2Q86VQ3 553 aa26.18■■□□□ 1.78
RPA1-203ENST00000571058 NUP155O75694 1391 aa26.18■■□□□ 1.78
RPA1-203ENST00000571058 ADGRB3O60242 1522 aa26.17■■□□□ 1.78
RPA1-203ENST00000571058 LTKP29376 864 aa26.14■■□□□ 1.78
RPA1-203ENST00000571058 E9PCH4 1651 aa26.14■■□□□ 1.78
RPA1-203ENST00000571058 NAIPQ13075 1403 aa26.09■■□□□ 1.77
RPA1-203ENST00000571058 HDGFP51858 240 aaKnown RBP26.07■■□□□ 1.76
RPA1-203ENST00000571058 HFM1A2PYH4 1435 aa26.06■■□□□ 1.76
RPA1-203ENST00000571058 UBAP1LF5GYI3 381 aa26.06■■□□□ 1.76
RPA1-203ENST00000571058 TMEM131LA2VDJ0 1609 aa26.04■■□□□ 1.76
RPA1-203ENST00000571058 MYO5BQ9ULV0 1848 aa26.01■■□□□ 1.75
RPA1-203ENST00000571058 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
RPA1-203ENST00000571058 ZFYVE9O95405 1425 aa26■■□□□ 1.75
RPA1-203ENST00000571058 TOM1O60784 492 aa25.99■■□□□ 1.75
RPA1-203ENST00000571058 SPHKAPQ2M3C7 1700 aa25.98■■□□□ 1.75
RPA1-203ENST00000571058 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.98■■□□□ 1.75
RPA1-203ENST00000571058 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
RPA1-203ENST00000571058 RIMS2Q9UQ26 1411 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms