RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 SEMA3EO15041 775 aa14.94□□□□□ -0.02
CDC27-212ENST00000570818 PSEN2P49810 448 aa14.92□□□□□ -0.02
CDC27-212ENST00000570818 POTEEQ6S8J3 1075 aa14.92□□□□□ -0.02
CDC27-212ENST00000570818 ANKRD13DQ6ZTN6 518 aa14.92□□□□□ -0.02
CDC27-212ENST00000570818 TULP1O00294 542 aaPredicted RBP14.91□□□□□ -0.02
CDC27-212ENST00000570818 C6orf132Q5T0Z8 1188 aa14.91□□□□□ -0.02
CDC27-212ENST00000570818 MLLT3P42568 568 aaPredicted RBP14.9□□□□□ -0.02
CDC27-212ENST00000570818 PPP1R3GB7ZBB8 358 aa14.89□□□□□ -0.03
CDC27-212ENST00000570818 OSBPP22059 807 aa14.89□□□□□ -0.03
CDC27-212ENST00000570818 TESPA1A2RU30 521 aaPredicted RBP14.88□□□□□ -0.03
CDC27-212ENST00000570818 TK2O00142 265 aa14.87□□□□□ -0.03
CDC27-212ENST00000570818 DMRTA1Q5VZB9 504 aa14.85□□□□□ -0.03
CDC27-212ENST00000570818 CERKQ8TCT0 537 aa14.85□□□□□ -0.03
CDC27-212ENST00000570818 SLC4A5Q9BY07 1137 aa14.84□□□□□ -0.03
CDC27-212ENST00000570818 ADGRD1Q6QNK2 874 aa14.83□□□□□ -0.04
CDC27-212ENST00000570818 TSR1Q2NL82 804 aaKnown RBP14.82□□□□□ -0.04
CDC27-212ENST00000570818 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
CDC27-212ENST00000570818 ZBED2Q9BTP6 218 aa14.8□□□□□ -0.04
CDC27-212ENST00000570818 COL9A1P20849 921 aa14.78□□□□□ -0.04
CDC27-212ENST00000570818 VPS9D1Q9Y2B5 631 aa14.78□□□□□ -0.04
CDC27-212ENST00000570818 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
CDC27-212ENST00000570818 SPNS2Q8IVW8 549 aa14.77□□□□□ -0.05
CDC27-212ENST00000570818 NUTM2FA1L443 756 aa14.76□□□□□ -0.05
CDC27-212ENST00000570818 ONECUT3O60422 494 aaPredicted RBP14.74□□□□□ -0.05
CDC27-212ENST00000570818 NBPF3Q9H094 633 aa14.74□□□□□ -0.05
CDC27-212ENST00000570818 CDHR5Q9HBB8 845 aa14.73□□□□□ -0.05
CDC27-212ENST00000570818 RABGEF1Q9UJ41 708 aa14.72□□□□□ -0.05
CDC27-212ENST00000570818 PROX2Q3B8N5 592 aa14.71□□□□□ -0.05
CDC27-212ENST00000570818 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
CDC27-212ENST00000570818 PRSS12P56730 875 aa14.7□□□□□ -0.06
CDC27-212ENST00000570818 RBM26Q5T8P6 1007 aaKnown RBP14.7□□□□□ -0.06
CDC27-212ENST00000570818 PACS2Q86VP3 889 aa14.7□□□□□ -0.06
CDC27-212ENST00000570818 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
CDC27-212ENST00000570818 MYT1LQ9UL68 1186 aa14.7□□□□□ -0.06
CDC27-212ENST00000570818 HRO43593 1189 aa14.69□□□□□ -0.06
CDC27-212ENST00000570818 CDCA7LQ96GN5 454 aa14.69□□□□□ -0.06
CDC27-212ENST00000570818 PLSCR2Q9NRY7 297 aa14.69□□□□□ -0.06
CDC27-212ENST00000570818 FCHSD2O94868 740 aa14.68□□□□□ -0.06
CDC27-212ENST00000570818 MRPL50Q8N5N7 158 aaKnown RBP14.67□□□□□ -0.06
CDC27-212ENST00000570818 PTGDRQ13258 359 aa14.66□□□□□ -0.06
CDC27-212ENST00000570818 KIAA1468Q9P260 1216 aa14.66□□□□□ -0.06
CDC27-212ENST00000570818 GOLGA8CPA6NN73 597 aa14.65□□□□□ -0.06
CDC27-212ENST00000570818 NPDC1Q9NQX5 325 aaPredicted RBP14.65□□□□□ -0.06
CDC27-212ENST00000570818 MMRN1Q13201 1228 aa14.64□□□□□ -0.07
CDC27-212ENST00000570818 GPIHBP1Q8IV16 184 aa14.64□□□□□ -0.07
CDC27-212ENST00000570818 BCANQ96GW7 911 aa14.64□□□□□ -0.07
CDC27-212ENST00000570818 BHMG1C9JSJ3 638 aaPredicted RBP14.63□□□□□ -0.07
CDC27-212ENST00000570818 NBPF26B4DH59 902 aa14.62□□□□□ -0.07
CDC27-212ENST00000570818 HIC1Q14526 733 aa14.62□□□□□ -0.07
CDC27-212ENST00000570818 RNF166Q96A37 237 aaPredicted RBP14.62□□□□□ -0.07
CDC27-212ENST00000570818 LAPTM4BQ86VI4 370 aa14.61□□□□□ -0.07
CDC27-212ENST00000570818 TSKSQ9UJT2 592 aa14.61□□□□□ -0.07
CDC27-212ENST00000570818 PADI6Q6TGC4 694 aa14.6□□□□□ -0.07
CDC27-212ENST00000570818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDC27-212ENST00000570818 LMOD2Q6P5Q4 547 aa14.57□□□□□ -0.08
CDC27-212ENST00000570818 GNPATO15228 680 aa14.55□□□□□ -0.08
CDC27-212ENST00000570818 FAM98CQ17RN3 349 aaKnown RBP14.55□□□□□ -0.08
CDC27-212ENST00000570818 TATDN2Q93075 761 aa14.55□□□□□ -0.08
CDC27-212ENST00000570818 PNMA3Q9UL41 463 aa14.55□□□□□ -0.08
CDC27-212ENST00000570818 TTC13Q8NBP0 860 aa14.54□□□□□ -0.08
CDC27-212ENST00000570818 SEPT9Q9UHD8 586 aaPredicted RBP14.54□□□□□ -0.08
CDC27-212ENST00000570818 NUDT18Q6ZVK8 323 aa14.52□□□□□ -0.09
CDC27-212ENST00000570818 ANKK1Q8NFD2 765 aa14.52□□□□□ -0.09
CDC27-212ENST00000570818 FAM198AQ9UFP1 575 aa14.52□□□□□ -0.09
CDC27-212ENST00000570818 WNT2BQ93097 391 aa14.51□□□□□ -0.09
CDC27-212ENST00000570818 KCTD12Q96CX2 325 aaKnown RBP14.51□□□□□ -0.09
CDC27-212ENST00000570818 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
CDC27-212ENST00000570818 RBM46Q8TBY0 533 aaKnown RBP14.49□□□□□ -0.09
CDC27-212ENST00000570818 ZFRQ96KR1 1074 aaKnown RBP14.49□□□□□ -0.09
CDC27-212ENST00000570818 GPR37O15354 613 aa14.48□□□□□ -0.09
CDC27-212ENST00000570818 SMAPO00193 183 aa14.47□□□□□ -0.09
CDC27-212ENST00000570818 OATP04181 439 aa14.46□□□□□ -0.09
CDC27-212ENST00000570818 ADGRG1Q9Y653 693 aa14.44□□□□□ -0.1
CDC27-212ENST00000570818 SLC4A3P48751 1232 aa14.43□□□□□ -0.1
CDC27-212ENST00000570818 LRCH3Q96II8 777 aa14.43□□□□□ -0.1
CDC27-212ENST00000570818 HCSTQ9UBK5 93 aa14.43□□□□□ -0.1
CDC27-212ENST00000570818 THSD4Q6ZMP0 1018 aa14.42□□□□□ -0.1
CDC27-212ENST00000570818 EYA1Q99502 592 aa14.41□□□□□ -0.1
CDC27-212ENST00000570818 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.41□□□□□ -0.1
CDC27-212ENST00000570818 SOWAHBA6NEL2 793 aa14.39□□□□□ -0.11
CDC27-212ENST00000570818 C3orf80F5H4A9 247 aa14.39□□□□□ -0.11
CDC27-212ENST00000570818 FECHP22830 423 aa14.39□□□□□ -0.11
CDC27-212ENST00000570818 DNAJB2P25686 324 aa14.39□□□□□ -0.11
CDC27-212ENST00000570818 MAP2K5Q13163 448 aa14.38□□□□□ -0.11
CDC27-212ENST00000570818 PTPN5P54829 565 aa14.37□□□□□ -0.11
CDC27-212ENST00000570818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.36□□□□□ -0.11
CDC27-212ENST00000570818 FAM161AQ3B820 660 aa14.36□□□□□ -0.11
CDC27-212ENST00000570818 SAMD7Q7Z3H4 446 aa14.36□□□□□ -0.11
CDC27-212ENST00000570818 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
CDC27-212ENST00000570818 MINK1Q8N4C8 1332 aaPredicted RBP14.36□□□□□ -0.11
CDC27-212ENST00000570818 BCAMP50895 628 aa14.35□□□□□ -0.11
CDC27-212ENST00000570818 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
CDC27-212ENST00000570818 ZC3H15Q8WU90 426 aaKnown RBP14.35□□□□□ -0.11
CDC27-212ENST00000570818 METTL3Q86U44 580 aaKnown RBP14.34□□□□□ -0.11
CDC27-212ENST00000570818 KRI1Q8N9T8 703 aaKnown RBP14.34□□□□□ -0.11
CDC27-212ENST00000570818 SLF2Q8IX21 1173 aa14.33□□□□□ -0.12
CDC27-212ENST00000570818 RCCD1A6NED2 376 aa14.32□□□□□ -0.12
CDC27-212ENST00000570818 RNF40O75150 1001 aa14.32□□□□□ -0.12
CDC27-212ENST00000570818 TSR3Q9UJK0 312 aaKnown RBP14.32□□□□□ -0.12
CDC27-212ENST00000570818 IRF6O14896 467 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms