RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
SMG6-207ENST00000570756 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
SMG6-207ENST00000570756 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.86
SMG6-207ENST00000570756 UHRF1BP1Q6BDS2 1440 aa20.38■□□□□ 0.85
SMG6-207ENST00000570756 GSE1Q14687 1217 aa20.37■□□□□ 0.85
SMG6-207ENST00000570756 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
SMG6-207ENST00000570756 ADGBQ8N7X0 1667 aa20.33■□□□□ 0.85
SMG6-207ENST00000570756 CARD11Q9BXL7 1154 aa20.33■□□□□ 0.84
SMG6-207ENST00000570756 E9PCH4 1651 aa20.32■□□□□ 0.84
SMG6-207ENST00000570756 NLRP13Q86W25 1043 aa20.32■□□□□ 0.84
SMG6-207ENST00000570756 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
SMG6-207ENST00000570756 DAXXQ9UER7 740 aaPredicted RBP20.31■□□□□ 0.84
SMG6-207ENST00000570756 ZNF644Q9H582 1327 aaPredicted RBP20.29■□□□□ 0.84
SMG6-207ENST00000570756 PLB1Q6P1J6 1458 aa20.29■□□□□ 0.84
SMG6-207ENST00000570756 PKD2Q13563 968 aa20.28■□□□□ 0.84
SMG6-207ENST00000570756 NFKBIBQ15653 356 aa20.28■□□□□ 0.84
SMG6-207ENST00000570756 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.28■□□□□ 0.84
SMG6-207ENST00000570756 PTPRGP23470 1445 aa20.28■□□□□ 0.84
SMG6-207ENST00000570756 INSRP06213 1382 aa20.27■□□□□ 0.84
SMG6-207ENST00000570756 BRPF3Q9ULD4 1205 aa20.27■□□□□ 0.84
SMG6-207ENST00000570756 PARD3Q8TEW0 1356 aa20.26■□□□□ 0.83
SMG6-207ENST00000570756 ADGRL2O95490 1459 aa20.26■□□□□ 0.83
SMG6-207ENST00000570756 ZMYM4Q5VZL5 1548 aa20.26■□□□□ 0.83
SMG6-207ENST00000570756 ST20-MTHFSA0A0A6YYL1 179 aa20.25■□□□□ 0.83
SMG6-207ENST00000570756 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
SMG6-207ENST00000570756 ITSN2Q9NZM3 1697 aa20.23■□□□□ 0.83
SMG6-207ENST00000570756 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
SMG6-207ENST00000570756 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
SMG6-207ENST00000570756 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
SMG6-207ENST00000570756 CROCC2H7BZ55 1655 aa20.21■□□□□ 0.83
SMG6-207ENST00000570756 UBE2Q2Q8WVN8 375 aa20.21■□□□□ 0.83
SMG6-207ENST00000570756 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
SMG6-207ENST00000570756 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
SMG6-207ENST00000570756 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
SMG6-207ENST00000570756 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
SMG6-207ENST00000570756 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
SMG6-207ENST00000570756 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
SMG6-207ENST00000570756 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
SMG6-207ENST00000570756 PLIN1O60240 522 aa20.19■□□□□ 0.82
SMG6-207ENST00000570756 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
SMG6-207ENST00000570756 CENPQQ7L2Z9 268 aaPredicted RBP20.18■□□□□ 0.82
SMG6-207ENST00000570756 NUP153P49790 1475 aaKnown RBP20.17■□□□□ 0.82
SMG6-207ENST00000570756 ANKRD50Q9ULJ7 1429 aa20.17■□□□□ 0.82
SMG6-207ENST00000570756 KDM2BQ8NHM5 1336 aa20.17■□□□□ 0.82
SMG6-207ENST00000570756 RAPGEF6Q8TEU7 1601 aa20.16■□□□□ 0.82
SMG6-207ENST00000570756 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
SMG6-207ENST00000570756 TROQ12816 1431 aaPredicted RBP20.14■□□□□ 0.81
SMG6-207ENST00000570756 ABCA8O94911 1581 aa20.14■□□□□ 0.81
SMG6-207ENST00000570756 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
SMG6-207ENST00000570756 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
SMG6-207ENST00000570756 NUP155O75694 1391 aa20.13■□□□□ 0.81
SMG6-207ENST00000570756 SKAP1Q86WV1 359 aa20.12■□□□□ 0.81
SMG6-207ENST00000570756 KDM5DQ9BY66 1539 aa20.12■□□□□ 0.81
SMG6-207ENST00000570756 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
SMG6-207ENST00000570756 GPATCH8Q9UKJ3 1502 aaKnown RBP20.11■□□□□ 0.81
SMG6-207ENST00000570756 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
SMG6-207ENST00000570756 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
SMG6-207ENST00000570756 RSPH6AQ9H0K4 717 aa20.1■□□□□ 0.81
SMG6-207ENST00000570756 EIF5BO60841 1220 aaKnown RBP20.09■□□□□ 0.81
SMG6-207ENST00000570756 C8orf34Q49A92 452 aa20.09■□□□□ 0.81
SMG6-207ENST00000570756 ADCY10Q96PN6 1610 aa20.08■□□□□ 0.8
SMG6-207ENST00000570756 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.07■□□□□ 0.8
SMG6-207ENST00000570756 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
SMG6-207ENST00000570756 SHANK2Q9UPX8 1470 aa20.07■□□□□ 0.8
SMG6-207ENST00000570756 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
SMG6-207ENST00000570756 ABCC2Q92887 1545 aa20.05■□□□□ 0.8
SMG6-207ENST00000570756 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
SMG6-207ENST00000570756 FRAT2O75474 233 aaPredicted RBP20.05■□□□□ 0.8
SMG6-207ENST00000570756 ATP10BO94823 1461 aa20.05■□□□□ 0.8
SMG6-207ENST00000570756 COL17A1Q9UMD9 1497 aaPredicted RBP20.05■□□□□ 0.8
SMG6-207ENST00000570756 CC2D1BQ5T0F9 858 aaKnown RBP20.03■□□□□ 0.8
SMG6-207ENST00000570756 PRAG1Q86YV5 1406 aa20.03■□□□□ 0.8
SMG6-207ENST00000570756 C9orf84Q5VXU9 1444 aa20.01■□□□□ 0.79
SMG6-207ENST00000570756 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
SMG6-207ENST00000570756 LAMC1P11047 1609 aa20.01■□□□□ 0.79
SMG6-207ENST00000570756 GPRASP1Q5JY77 1395 aa20■□□□□ 0.79
SMG6-207ENST00000570756 ZCCHC11Q5TAX3 1644 aaKnown RBP19.97■□□□□ 0.79
SMG6-207ENST00000570756 DUSP27Q5VZP5 1158 aa19.97■□□□□ 0.79
SMG6-207ENST00000570756 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
SMG6-207ENST00000570756 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
SMG6-207ENST00000570756 PANK3Q9H999 370 aa19.97■□□□□ 0.79
SMG6-207ENST00000570756 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
SMG6-207ENST00000570756 RGS3P49796 1198 aa19.96■□□□□ 0.79
SMG6-207ENST00000570756 PRDM15P57071 1507 aaPredicted RBP19.96■□□□□ 0.79
SMG6-207ENST00000570756 UHRF1BP1LA0JNW5 1464 aa19.96■□□□□ 0.79
SMG6-207ENST00000570756 ADAMTS8Q9UP79 889 aa19.95■□□□□ 0.78
SMG6-207ENST00000570756 TSPY4P0CV99 314 aa19.95■□□□□ 0.78
SMG6-207ENST00000570756 TSPY10P0CW01 314 aa19.95■□□□□ 0.78
SMG6-207ENST00000570756 GOLGA2Q08379 1002 aa19.95■□□□□ 0.78
SMG6-207ENST00000570756 WDR43Q15061 677 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMG6-207ENST00000570756 CCDC144AA2RUR9 1427 aa19.94■□□□□ 0.78
SMG6-207ENST00000570756 ERBINQ96RT1 1412 aa19.94■□□□□ 0.78
SMG6-207ENST00000570756 DISP3Q9P2K9 1392 aa19.94■□□□□ 0.78
SMG6-207ENST00000570756 TMF1P82094 1093 aa19.93■□□□□ 0.78
SMG6-207ENST00000570756 BECN1Q14457 450 aa19.93■□□□□ 0.78
SMG6-207ENST00000570756 TESK2Q96S53 571 aa19.93■□□□□ 0.78
SMG6-207ENST00000570756 L1TD1Q5T7N2 865 aaKnown RBP19.92■□□□□ 0.78
SMG6-207ENST00000570756 PLEKHH1Q9ULM0 1364 aa19.92■□□□□ 0.78
SMG6-207ENST00000570756 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
SMG6-207ENST00000570756 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms