RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
NDE1-203ENST00000570727 PKD2Q13563 968 aa23.43■■□□□ 1.34
NDE1-203ENST00000570727 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
NDE1-203ENST00000570727 TCOF1Q13428 1488 aaKnown RBP23.41■■□□□ 1.34
NDE1-203ENST00000570727 WASHC2CQ9Y4E1 1318 aa23.4■■□□□ 1.34
NDE1-203ENST00000570727 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
NDE1-203ENST00000570727 A2ML1A8K2U0 1454 aa23.38■■□□□ 1.33
NDE1-203ENST00000570727 DNMT1P26358 1616 aaKnown RBP23.38■■□□□ 1.33
NDE1-203ENST00000570727 ZNF335Q9H4Z2 1342 aaPredicted RBP23.37■■□□□ 1.33
NDE1-203ENST00000570727 FAM135AQ9P2D6 1515 aa23.37■■□□□ 1.33
NDE1-203ENST00000570727 PZPP20742 1482 aa23.36■■□□□ 1.33
NDE1-203ENST00000570727 TNRQ92752 1358 aa23.36■■□□□ 1.33
NDE1-203ENST00000570727 MAST1Q9Y2H9 1570 aa23.35■■□□□ 1.33
NDE1-203ENST00000570727 MIA2Q96PC5 1412 aa23.35■■□□□ 1.33
NDE1-203ENST00000570727 IQSEC2Q5JU85 1478 aa23.35■■□□□ 1.33
NDE1-203ENST00000570727 MYOM3Q5VTT5 1437 aa23.34■■□□□ 1.33
NDE1-203ENST00000570727 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
NDE1-203ENST00000570727 ABCC3O15438 1527 aa23.25■■□□□ 1.31
NDE1-203ENST00000570727 THEMISQ8N1K5 641 aaPredicted RBP23.25■■□□□ 1.31
NDE1-203ENST00000570727 EIF2AK4Q9P2K8 1649 aaKnown RBP23.25■■□□□ 1.31
NDE1-203ENST00000570727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
NDE1-203ENST00000570727 NLRP1Q9C000 1473 aa23.24■■□□□ 1.31
NDE1-203ENST00000570727 NEURL4Q96JN8 1562 aa23.24■■□□□ 1.31
NDE1-203ENST00000570727 POLR1AO95602 1720 aaPredicted RBP23.24■■□□□ 1.31
NDE1-203ENST00000570727 MROH1Q8NDA8 1641 aa23.23■■□□□ 1.31
NDE1-203ENST00000570727 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
NDE1-203ENST00000570727 APLP2Q06481 763 aa23.22■■□□□ 1.31
NDE1-203ENST00000570727 ABCC5O15440 1437 aa23.22■■□□□ 1.31
NDE1-203ENST00000570727 ZC3H13Q5T200 1668 aaKnown RBP23.22■■□□□ 1.31
NDE1-203ENST00000570727 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
NDE1-203ENST00000570727 DUOX2Q9NRD8 1548 aa23.21■■□□□ 1.31
NDE1-203ENST00000570727 UGGT1Q9NYU2 1555 aa23.21■■□□□ 1.31
NDE1-203ENST00000570727 UBAP1LF5GYI3 381 aa23.2■■□□□ 1.3
NDE1-203ENST00000570727 PTPN23Q9H3S7 1636 aa23.19■■□□□ 1.3
NDE1-203ENST00000570727 SPATA31D1Q6ZQQ2 1576 aa23.19■■□□□ 1.3
NDE1-203ENST00000570727 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
NDE1-203ENST00000570727 CEP152O94986 1710 aa23.18■■□□□ 1.3
NDE1-203ENST00000570727 KIF15Q9NS87 1388 aa23.17■■□□□ 1.3
NDE1-203ENST00000570727 ERVK-7P63135 1459 aa23.17■■□□□ 1.3
NDE1-203ENST00000570727 DISP3Q9P2K9 1392 aa23.16■■□□□ 1.3
NDE1-203ENST00000570727 CROCC2H7BZ55 1655 aa23.16■■□□□ 1.3
NDE1-203ENST00000570727 MED14O60244 1454 aa23.16■■□□□ 1.3
NDE1-203ENST00000570727 SHANK2Q9UPX8 1470 aa23.16■■□□□ 1.3
NDE1-203ENST00000570727 FGD6Q6ZV73 1430 aa23.15■■□□□ 1.3
NDE1-203ENST00000570727 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
NDE1-203ENST00000570727 DAPK1P53355 1430 aa23.14■■□□□ 1.29
NDE1-203ENST00000570727 NPHP4O75161 1426 aaPredicted RBP23.13■■□□□ 1.29
NDE1-203ENST00000570727 ILDR2Q71H61 639 aa23.12■■□□□ 1.29
NDE1-203ENST00000570727 ERBINQ96RT1 1412 aa23.12■■□□□ 1.29
NDE1-203ENST00000570727 VWDEQ8N2E2 1590 aa23.11■■□□□ 1.29
NDE1-203ENST00000570727 CPS1P31327 1500 aa23.11■■□□□ 1.29
NDE1-203ENST00000570727 PRDM15P57071 1507 aaPredicted RBP23.1■■□□□ 1.29
NDE1-203ENST00000570727 CHIC2Q9UKJ5 165 aa23.1■■□□□ 1.29
NDE1-203ENST00000570727 ARHGAP31Q2M1Z3 1444 aa23.09■■□□□ 1.29
NDE1-203ENST00000570727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.292e-8■■□□□ 13.1
NDE1-203ENST00000570727 UBR1Q8IWV7 1749 aa23.08■■□□□ 1.28
NDE1-203ENST00000570727 IQGAP1P46940 1657 aa23.07■■□□□ 1.28
NDE1-203ENST00000570727 ANKRD30AQ9BXX3 1397 aa23.05■■□□□ 1.28
NDE1-203ENST00000570727 TOM1O60784 492 aa23.03■■□□□ 1.28
NDE1-203ENST00000570727 LTKP29376 864 aa23.03■■□□□ 1.28
NDE1-203ENST00000570727 STRCP1A6NGW2 1772 aa23.03■■□□□ 1.28
NDE1-203ENST00000570727 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
NDE1-203ENST00000570727 KANK1Q14678 1352 aa23.01■■□□□ 1.27
NDE1-203ENST00000570727 ARHGAP23Q9P227 1491 aa23■■□□□ 1.27
NDE1-203ENST00000570727 TXNDC2Q86VQ3 553 aa23■■□□□ 1.27
NDE1-203ENST00000570727 SLIT1O75093 1534 aa22.99■■□□□ 1.27
NDE1-203ENST00000570727 SCAF11Q99590 1463 aaKnown RBP22.98■■□□□ 1.27
NDE1-203ENST00000570727 LMTK2Q8IWU2 1503 aa22.98■■□□□ 1.27
NDE1-203ENST00000570727 HSPA1LP34931 641 aa22.98■■□□□ 1.27
NDE1-203ENST00000570727 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
NDE1-203ENST00000570727 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
NDE1-203ENST00000570727 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
NDE1-203ENST00000570727 PIK3C2BO00750 1634 aa22.97■■□□□ 1.27
NDE1-203ENST00000570727 ALKQ9UM73 1620 aa22.97■■□□□ 1.27
NDE1-203ENST00000570727 IDI1Q13907 227 aa22.96■■□□□ 1.27
NDE1-203ENST00000570727 LRRC7Q96NW7 1537 aa22.96■■□□□ 1.27
NDE1-203ENST00000570727 SOCS7O14512 581 aa22.93■■□□□ 1.26
NDE1-203ENST00000570727 EID1Q9Y6B2 187 aa22.93■■□□□ 1.26
NDE1-203ENST00000570727 TMEM2Q9UHN6 1383 aa22.92■■□□□ 1.26
NDE1-203ENST00000570727 STAG3Q9UJ98 1225 aa22.91■■□□□ 1.26
NDE1-203ENST00000570727 NOS1P29475 1434 aa22.91■■□□□ 1.26
NDE1-203ENST00000570727 SYNMO15061 1565 aa22.9■■□□□ 1.26
NDE1-203ENST00000570727 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
NDE1-203ENST00000570727 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.25
NDE1-203ENST00000570727 EFCAB6Q5THR3 1501 aa22.88■■□□□ 1.25
NDE1-203ENST00000570727 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
NDE1-203ENST00000570727 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
NDE1-203ENST00000570727 TET3O43151 1660 aa22.82■■□□□ 1.24
NDE1-203ENST00000570727 RPRD2Q5VT52 1461 aaKnown RBP22.8■■□□□ 1.24
NDE1-203ENST00000570727 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
NDE1-203ENST00000570727 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
NDE1-203ENST00000570727 MED1Q15648 1581 aaPredicted RBP22.79■■□□□ 1.24
NDE1-203ENST00000570727 KCNA6P17658 529 aa22.78■■□□□ 1.24
NDE1-203ENST00000570727 MYO5BQ9ULV0 1848 aa22.76■■□□□ 1.23
NDE1-203ENST00000570727 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
NDE1-203ENST00000570727 ROCK1Q13464 1354 aa22.76■■□□□ 1.23
NDE1-203ENST00000570727 UNC13BO14795 1591 aa22.75■■□□□ 1.23
NDE1-203ENST00000570727 GCC2Q8IWJ2 1684 aa22.74■■□□□ 1.23
NDE1-203ENST00000570727 PPARGC1BQ86YN6 1023 aaKnown RBP22.73■■□□□ 1.23
NDE1-203ENST00000570727 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms