RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 WASHC2CQ9Y4E1 1318 aa33.01■■■□□ 2.87
RPA1-202ENST00000570451 CEP170BQ9Y4F5 1589 aaPredicted RBP33■■■□□ 2.87
RPA1-202ENST00000570451 ZNF142P52746 1687 aaPredicted RBP32.99■■■□□ 2.87
RPA1-202ENST00000570451 MAST1Q9Y2H9 1570 aa32.99■■■□□ 2.87
RPA1-202ENST00000570451 NCKAP5LQ9HCH0 1330 aa32.96■■■□□ 2.87
RPA1-202ENST00000570451 FAM135AQ9P2D6 1515 aa32.95■■■□□ 2.87
RPA1-202ENST00000570451 FBXO31Q5XUX0 539 aaPredicted RBP32.94■■■□□ 2.86
RPA1-202ENST00000570451 PZPP20742 1482 aa32.92■■■□□ 2.86
RPA1-202ENST00000570451 TNRQ92752 1358 aa32.91■■■□□ 2.86
RPA1-202ENST00000570451 A2ML1A8K2U0 1454 aa32.9■■■□□ 2.86
RPA1-202ENST00000570451 PTPN23Q9H3S7 1636 aa32.88■■■□□ 2.85
RPA1-202ENST00000570451 PLA2R1Q13018 1463 aa32.88■■■□□ 2.85
RPA1-202ENST00000570451 RNF17Q9BXT8 1623 aaKnown RBP32.87■■■□□ 2.85
RPA1-202ENST00000570451 PKD2Q13563 968 aa32.86■■■□□ 2.85
RPA1-202ENST00000570451 DNMT1P26358 1616 aaKnown RBP32.84■■■□□ 2.85
RPA1-202ENST00000570451 EIF2AK4Q9P2K8 1649 aaKnown RBP32.84■■■□□ 2.85
RPA1-202ENST00000570451 TCOF1Q13428 1488 aaKnown RBP32.82■■■□□ 2.84
RPA1-202ENST00000570451 ABCC5O15440 1437 aa32.82■■■□□ 2.84
RPA1-202ENST00000570451 FGD6Q6ZV73 1430 aa32.82■■■□□ 2.84
RPA1-202ENST00000570451 DUOX2Q9NRD8 1548 aa32.82■■■□□ 2.84
RPA1-202ENST00000570451 LTBP4Q8N2S1 1624 aa32.81■■■□□ 2.84
RPA1-202ENST00000570451 CROCC2H7BZ55 1655 aa32.81■■■□□ 2.84
RPA1-202ENST00000570451 ABCC3O15438 1527 aa32.81■■■□□ 2.84
RPA1-202ENST00000570451 KIF15Q9NS87 1388 aa32.81■■■□□ 2.84
RPA1-202ENST00000570451 SHANK2Q9UPX8 1470 aa32.8■■■□□ 2.84
RPA1-202ENST00000570451 RRP7BPQ9NSQ0 103 aa32.79■■■□□ 2.84
RPA1-202ENST00000570451 ZC3H13Q5T200 1668 aaKnown RBP32.78■■■□□ 2.84
RPA1-202ENST00000570451 DAPK1P53355 1430 aa32.77■■■□□ 2.84
RPA1-202ENST00000570451 ZNF335Q9H4Z2 1342 aaPredicted RBP32.76■■■□□ 2.83
RPA1-202ENST00000570451 MROH1Q8NDA8 1641 aa32.75■■■□□ 2.83
RPA1-202ENST00000570451 NLRP1Q9C000 1473 aa32.73■■■□□ 2.83
RPA1-202ENST00000570451 CHIC2Q9UKJ5 165 aa32.72■■■□□ 2.83
RPA1-202ENST00000570451 CEP152O94986 1710 aa32.71■■■□□ 2.83
RPA1-202ENST00000570451 ERBINQ96RT1 1412 aa32.71■■■□□ 2.83
RPA1-202ENST00000570451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.7■■■□□ 2.82
RPA1-202ENST00000570451 UGGT1Q9NYU2 1555 aa32.69■■■□□ 2.82
RPA1-202ENST00000570451 THEMISQ8N1K5 641 aaPredicted RBP32.68■■■□□ 2.82
RPA1-202ENST00000570451 POLR1AO95602 1720 aaPredicted RBP32.68■■■□□ 2.82
RPA1-202ENST00000570451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.67■■■□□ 2.82
RPA1-202ENST00000570451 ERVK-7P63135 1459 aa32.67■■■□□ 2.82
RPA1-202ENST00000570451 IQSEC2Q5JU85 1478 aa32.66■■■□□ 2.82
RPA1-202ENST00000570451 SPATA31D1Q6ZQQ2 1576 aa32.66■■■□□ 2.82
RPA1-202ENST00000570451 ANKRD30AQ9BXX3 1397 aa32.65■■■□□ 2.82
RPA1-202ENST00000570451 PRDM15P57071 1507 aaPredicted RBP32.64■■■□□ 2.82
RPA1-202ENST00000570451 FAM50AQ14320 339 aaKnown RBP32.64■■■□□ 2.82
RPA1-202ENST00000570451 ANKLE2Q86XL3 938 aa32.64■■■□□ 2.82
RPA1-202ENST00000570451 NEURL4Q96JN8 1562 aa32.62■■■□□ 2.81
RPA1-202ENST00000570451 CFAP65Q6ZU64 1925 aaKnown RBP32.62■■■□□ 2.81
RPA1-202ENST00000570451 KANK1Q14678 1352 aa32.58■■■□□ 2.81
RPA1-202ENST00000570451 DEPDC5O75140 1603 aa32.55■■■□□ 2.8
RPA1-202ENST00000570451 NPHP4O75161 1426 aaPredicted RBP32.53■■■□□ 2.8
RPA1-202ENST00000570451 ARHGAP31Q2M1Z3 1444 aa32.52■■■□□ 2.8
RPA1-202ENST00000570451 UBAP1LF5GYI3 381 aa32.51■■■□□ 2.79
RPA1-202ENST00000570451 ADGRL2O95490 1459 aa32.49■■■□□ 2.79
RPA1-202ENST00000570451 MED14O60244 1454 aa32.48■■■□□ 2.79
RPA1-202ENST00000570451 UBR1Q8IWV7 1749 aa32.46■■■□□ 2.79
RPA1-202ENST00000570451 IQGAP1P46940 1657 aa32.45■■■□□ 2.79
RPA1-202ENST00000570451 CPS1P31327 1500 aa32.44■■■□□ 2.78
RPA1-202ENST00000570451 LMTK2Q8IWU2 1503 aa32.42■■■□□ 2.78
RPA1-202ENST00000570451 VWDEQ8N2E2 1590 aa32.42■■■□□ 2.78
RPA1-202ENST00000570451 ANKRD50Q9ULJ7 1429 aa32.4■■■□□ 2.78
RPA1-202ENST00000570451 PPARGC1BQ86YN6 1023 aaKnown RBP32.39■■■□□ 2.78
RPA1-202ENST00000570451 STAG3Q9UJ98 1225 aa32.39■■■□□ 2.78
RPA1-202ENST00000570451 SCAF11Q99590 1463 aaKnown RBP32.37■■■□□ 2.77
RPA1-202ENST00000570451 PIK3C2BO00750 1634 aa32.37■■■□□ 2.77
RPA1-202ENST00000570451 TXNDC2Q86VQ3 553 aa32.35■■■□□ 2.77
RPA1-202ENST00000570451 EFCAB6Q5THR3 1501 aa32.35■■■□□ 2.77
RPA1-202ENST00000570451 SCAF1Q9H7N4 1312 aaKnown RBP32.34■■■□□ 2.77
RPA1-202ENST00000570451 SLIT1O75093 1534 aa32.33■■■□□ 2.77
RPA1-202ENST00000570451 LTKP29376 864 aa32.33■■■□□ 2.77
RPA1-202ENST00000570451 EID1Q9Y6B2 187 aa32.33■■■□□ 2.77
RPA1-202ENST00000570451 ARHGAP23Q9P227 1491 aa32.33■■■□□ 2.77
RPA1-202ENST00000570451 DISP3Q9P2K9 1392 aa32.32■■■□□ 2.77
RPA1-202ENST00000570451 SYNMO15061 1565 aa32.3■■■□□ 2.76
RPA1-202ENST00000570451 PIP4K2BP78356 416 aa32.3■■■□□ 2.76
RPA1-202ENST00000570451 IDI1Q13907 227 aa32.3■■■□□ 2.76
RPA1-202ENST00000570451 ITGAEP38570 1179 aa32.29■■■□□ 2.76
RPA1-202ENST00000570451 TOM1O60784 492 aa32.28■■■□□ 2.76
RPA1-202ENST00000570451 TMEM2Q9UHN6 1383 aa32.27■■■□□ 2.76
RPA1-202ENST00000570451 NOS1P29475 1434 aa32.26■■■□□ 2.76
RPA1-202ENST00000570451 STRCP1A6NGW2 1772 aa32.24■■■□□ 2.75
RPA1-202ENST00000570451 ROCK1Q13464 1354 aa32.23■■■□□ 2.75
RPA1-202ENST00000570451 RPRD2Q5VT52 1461 aaKnown RBP32.21■■■□□ 2.75
RPA1-202ENST00000570451 TET3O43151 1660 aa32.21■■■□□ 2.75
RPA1-202ENST00000570451 KDM5AP29375 1690 aaKnown RBP32.21■■■□□ 2.75
RPA1-202ENST00000570451 LRRC7Q96NW7 1537 aa32.21■■■□□ 2.75
RPA1-202ENST00000570451 SLC52A1Q9NWF4 448 aa32.2■■■□□ 2.75
RPA1-202ENST00000570451 ADGRB3O60242 1522 aa32.2■■■□□ 2.74
RPA1-202ENST00000570451 UNC13BO14795 1591 aa32.19■■■□□ 2.74
RPA1-202ENST00000570451 GCC2Q8IWJ2 1684 aa32.15■■■□□ 2.74
RPA1-202ENST00000570451 HSPA1LP34931 641 aa32.14■■■□□ 2.74
RPA1-202ENST00000570451 BCANQ96GW7 911 aa32.1■■■□□ 2.73
RPA1-202ENST00000570451 SLC26A8Q96RN1 970 aa32.09■■■□□ 2.73
RPA1-202ENST00000570451 NUP155O75694 1391 aa32.08■■■□□ 2.73
RPA1-202ENST00000570451 ALKQ9UM73 1620 aa32.08■■■□□ 2.73
RPA1-202ENST00000570451 SENP3Q9H4L4 574 aaPredicted RBP32.08■■■□□ 2.73
RPA1-202ENST00000570451 IQGAP3Q86VI3 1631 aa32.08■■■□□ 2.73
RPA1-202ENST00000570451 CHGAP10645 457 aaKnown RBP32.07■■■□□ 2.72
RPA1-202ENST00000570451 ILDR2Q71H61 639 aa32.07■■■□□ 2.72
RPA1-202ENST00000570451 E9PCH4 1651 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms