RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
CNOT1-220ENST00000569916 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
CNOT1-220ENST00000569916 MROH1Q8NDA8 1641 aa20.23■□□□□ 0.83
CNOT1-220ENST00000569916 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
CNOT1-220ENST00000569916 MYO3AQ8NEV4 1616 aa20.2■□□□□ 0.82
CNOT1-220ENST00000569916 HSPA2P54652 639 aa20.2■□□□□ 0.82
CNOT1-220ENST00000569916 KIF15Q9NS87 1388 aa20.2■□□□□ 0.82
CNOT1-220ENST00000569916 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
CNOT1-220ENST00000569916 ZNF142P52746 1687 aaPredicted RBP20.19■□□□□ 0.82
CNOT1-220ENST00000569916 ERBINQ96RT1 1412 aa20.18■□□□□ 0.82
CNOT1-220ENST00000569916 ADGRL2O95490 1459 aa20.18■□□□□ 0.82
CNOT1-220ENST00000569916 CEP152O94986 1710 aa20.17■□□□□ 0.82
CNOT1-220ENST00000569916 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
CNOT1-220ENST00000569916 ABCC3O15438 1527 aa20.16■□□□□ 0.82
CNOT1-220ENST00000569916 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
CNOT1-220ENST00000569916 STRCQ7RTU9 1775 aa20.16■□□□□ 0.82
CNOT1-220ENST00000569916 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
CNOT1-220ENST00000569916 PZPP20742 1482 aa20.14■□□□□ 0.81
CNOT1-220ENST00000569916 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.81
CNOT1-220ENST00000569916 CAMSAP1Q5T5Y3 1602 aa20.13■□□□□ 0.81
CNOT1-220ENST00000569916 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
CNOT1-220ENST00000569916 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
CNOT1-220ENST00000569916 RRP7BPQ9NSQ0 103 aa20.13■□□□□ 0.81
CNOT1-220ENST00000569916 WASHC2CQ9Y4E1 1318 aa20.12■□□□□ 0.81
CNOT1-220ENST00000569916 CHIC2Q9UKJ5 165 aa20.12■□□□□ 0.81
CNOT1-220ENST00000569916 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
CNOT1-220ENST00000569916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.83e-6■□□□□ 9.8
CNOT1-220ENST00000569916 SPATA31D1Q6ZQQ2 1576 aa20.06■□□□□ 0.8
CNOT1-220ENST00000569916 VWDEQ8N2E2 1590 aa20.06■□□□□ 0.8
CNOT1-220ENST00000569916 FBXO31Q5XUX0 539 aaPredicted RBP20.05■□□□□ 0.8
CNOT1-220ENST00000569916 A2ML1A8K2U0 1454 aa20.05■□□□□ 0.8
CNOT1-220ENST00000569916 TNRQ92752 1358 aa20.04■□□□□ 0.8
CNOT1-220ENST00000569916 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
CNOT1-220ENST00000569916 ERVK-7P63135 1459 aa20.02■□□□□ 0.8
CNOT1-220ENST00000569916 CFAP65Q6ZU64 1925 aaKnown RBP20.02■□□□□ 0.79
CNOT1-220ENST00000569916 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.79
CNOT1-220ENST00000569916 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.79
CNOT1-220ENST00000569916 ROCK1Q13464 1354 aa20.01■□□□□ 0.79
CNOT1-220ENST00000569916 UNC13BO14795 1591 aa20■□□□□ 0.79
CNOT1-220ENST00000569916 PLA2R1Q13018 1463 aa20■□□□□ 0.79
CNOT1-220ENST00000569916 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
CNOT1-220ENST00000569916 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
CNOT1-220ENST00000569916 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
CNOT1-220ENST00000569916 KANK1Q14678 1352 aa19.97■□□□□ 0.79
CNOT1-220ENST00000569916 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
CNOT1-220ENST00000569916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.97■□□□□ 0.794e-8■□□□□ 10
CNOT1-220ENST00000569916 PTPRTO14522 1441 aa19.96■□□□□ 0.79
CNOT1-220ENST00000569916 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
CNOT1-220ENST00000569916 ITGAEP38570 1179 aa19.94■□□□□ 0.78
CNOT1-220ENST00000569916 TET3O43151 1660 aa19.94■□□□□ 0.78
CNOT1-220ENST00000569916 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
CNOT1-220ENST00000569916 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
CNOT1-220ENST00000569916 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
CNOT1-220ENST00000569916 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
CNOT1-220ENST00000569916 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
CNOT1-220ENST00000569916 NCKAP5LQ9HCH0 1330 aa19.9■□□□□ 0.78
CNOT1-220ENST00000569916 SYNMO15061 1565 aa19.9■□□□□ 0.78
CNOT1-220ENST00000569916 PIK3C2BO00750 1634 aa19.88■□□□□ 0.77
CNOT1-220ENST00000569916 PKD2Q13563 968 aa19.87■□□□□ 0.77
CNOT1-220ENST00000569916 E9PCH4 1651 aa19.87■□□□□ 0.77
CNOT1-220ENST00000569916 RPRD2Q5VT52 1461 aaKnown RBP19.86■□□□□ 0.77
CNOT1-220ENST00000569916 KDM5AP29375 1690 aaKnown RBP19.86■□□□□ 0.77
CNOT1-220ENST00000569916 NOS1P29475 1434 aa19.85■□□□□ 0.77
CNOT1-220ENST00000569916 LTBP4Q8N2S1 1624 aa19.84■□□□□ 0.77
CNOT1-220ENST00000569916 ILDR1Q86SU0 546 aaPredicted RBP19.83■□□□□ 0.77
CNOT1-220ENST00000569916 THEMISQ8N1K5 641 aaPredicted RBP19.83■□□□□ 0.77
CNOT1-220ENST00000569916 NAIPQ13075 1403 aa19.82■□□□□ 0.76
CNOT1-220ENST00000569916 IQGAP1P46940 1657 aa19.81■□□□□ 0.76
CNOT1-220ENST00000569916 SLIT1O75093 1534 aa19.81■□□□□ 0.76
CNOT1-220ENST00000569916 MED14O60244 1454 aa19.8■□□□□ 0.76
CNOT1-220ENST00000569916 ARHGAP23Q9P227 1491 aa19.79■□□□□ 0.76
CNOT1-220ENST00000569916 CERKQ8TCT0 537 aa19.79■□□□□ 0.76
CNOT1-220ENST00000569916 ADGRB3O60242 1522 aa19.79■□□□□ 0.76
CNOT1-220ENST00000569916 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
CNOT1-220ENST00000569916 NUP155O75694 1391 aa19.78■□□□□ 0.76
CNOT1-220ENST00000569916 MYO5BQ9ULV0 1848 aa19.77■□□□□ 0.76
CNOT1-220ENST00000569916 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.76
CNOT1-220ENST00000569916 FBXO41Q8TF61 875 aa19.77■□□□□ 0.76
CNOT1-220ENST00000569916 NPHP4O75161 1426 aaPredicted RBP19.76■□□□□ 0.75
CNOT1-220ENST00000569916 IDI1Q13907 227 aa19.75■□□□□ 0.75
CNOT1-220ENST00000569916 ZNF335Q9H4Z2 1342 aaPredicted RBP19.75■□□□□ 0.75
CNOT1-220ENST00000569916 SCAF11Q99590 1463 aaKnown RBP19.74■□□□□ 0.75
CNOT1-220ENST00000569916 SPHKAPQ2M3C7 1700 aa19.74■□□□□ 0.75
CNOT1-220ENST00000569916 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
CNOT1-220ENST00000569916 TMEM2Q9UHN6 1383 aa19.71■□□□□ 0.75
CNOT1-220ENST00000569916 SLC52A1Q9NWF4 448 aa19.71■□□□□ 0.75
CNOT1-220ENST00000569916 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
CNOT1-220ENST00000569916 STRCP1A6NGW2 1772 aa19.68■□□□□ 0.74
CNOT1-220ENST00000569916 LTKP29376 864 aa19.68■□□□□ 0.74
CNOT1-220ENST00000569916 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
CNOT1-220ENST00000569916 CPS1P31327 1500 aa19.66■□□□□ 0.74
CNOT1-220ENST00000569916 TXNDC2Q86VQ3 553 aa19.65■□□□□ 0.74
CNOT1-220ENST00000569916 ZFYVE9O95405 1425 aa19.64■□□□□ 0.73
CNOT1-220ENST00000569916 TRPM2O94759 1503 aa19.63■□□□□ 0.73
CNOT1-220ENST00000569916 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
CNOT1-220ENST00000569916 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
CNOT1-220ENST00000569916 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
CNOT1-220ENST00000569916 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
CNOT1-220ENST00000569916 KIF1BO60333 1816 aa19.58■□□□□ 0.72
CNOT1-220ENST00000569916 CHGAP10645 457 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms