RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
PDXDC1-216ENST00000569715 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
PDXDC1-216ENST00000569715 DEPDC5O75140 1603 aa15.79■□□□□ 0.12
PDXDC1-216ENST00000569715 ABCA6Q8N139 1617 aa15.79■□□□□ 0.12
PDXDC1-216ENST00000569715 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
PDXDC1-216ENST00000569715 MLH3Q9UHC1 1453 aa15.79■□□□□ 0.12
PDXDC1-216ENST00000569715 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
PDXDC1-216ENST00000569715 EIF2AK4Q9P2K8 1649 aaKnown RBP15.77■□□□□ 0.12
PDXDC1-216ENST00000569715 DHX29Q7Z478 1369 aaKnown RBP15.77■□□□□ 0.11
PDXDC1-216ENST00000569715 MROH1Q8NDA8 1641 aa15.76■□□□□ 0.11
PDXDC1-216ENST00000569715 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
PDXDC1-216ENST00000569715 A2MP01023 1474 aa15.75■□□□□ 0.11
PDXDC1-216ENST00000569715 DIP2CQ9Y2E4 1556 aa15.74■□□□□ 0.11
PDXDC1-216ENST00000569715 KIF3BO15066 747 aa15.74■□□□□ 0.11
PDXDC1-216ENST00000569715 L3MBTL2Q969R5 705 aa15.74■□□□□ 0.11
PDXDC1-216ENST00000569715 PRDM15P57071 1507 aaPredicted RBP15.73■□□□□ 0.11
PDXDC1-216ENST00000569715 VWDEQ8N2E2 1590 aa15.72■□□□□ 0.11
PDXDC1-216ENST00000569715 E9PCH4 1651 aa15.72■□□□□ 0.11
PDXDC1-216ENST00000569715 YEATS2Q9ULM3 1422 aa15.72■□□□□ 0.11
PDXDC1-216ENST00000569715 PLA2R1Q13018 1463 aa15.72■□□□□ 0.11
PDXDC1-216ENST00000569715 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
PDXDC1-216ENST00000569715 ZMYM4Q5VZL5 1548 aa15.69■□□□□ 0.1
PDXDC1-216ENST00000569715 TET3O43151 1660 aa15.69■□□□□ 0.1
PDXDC1-216ENST00000569715 CEP152O94986 1710 aa15.68■□□□□ 0.1
PDXDC1-216ENST00000569715 BCORL1Q5H9F3 1711 aa15.67■□□□□ 0.1
PDXDC1-216ENST00000569715 COL17A1Q9UMD9 1497 aaPredicted RBP15.67■□□□□ 0.1
PDXDC1-216ENST00000569715 KANK1Q14678 1352 aa15.66■□□□□ 0.1
PDXDC1-216ENST00000569715 CCDC144AA2RUR9 1427 aa15.65■□□□□ 0.1
PDXDC1-216ENST00000569715 DIEXFQ68CQ4 756 aaKnown RBP15.65■□□□□ 0.1
PDXDC1-216ENST00000569715 ATP10AO60312 1499 aa15.64■□□□□ 0.09
PDXDC1-216ENST00000569715 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
PDXDC1-216ENST00000569715 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
PDXDC1-216ENST00000569715 EFCAB6Q5THR3 1501 aa15.63■□□□□ 0.09
PDXDC1-216ENST00000569715 GGT6Q6P531 493 aa15.62■□□□□ 0.09
PDXDC1-216ENST00000569715 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
PDXDC1-216ENST00000569715 TRPM2O94759 1503 aa15.61■□□□□ 0.09
PDXDC1-216ENST00000569715 LMTK2Q8IWU2 1503 aa15.61■□□□□ 0.09
PDXDC1-216ENST00000569715 SIGLEC1Q9BZZ2 1709 aa15.6■□□□□ 0.09
PDXDC1-216ENST00000569715 CLTCL1P53675 1640 aa15.6■□□□□ 0.09
PDXDC1-216ENST00000569715 PTPRTO14522 1441 aa15.59■□□□□ 0.09
PDXDC1-216ENST00000569715 ABCC3O15438 1527 aa15.59■□□□□ 0.09
PDXDC1-216ENST00000569715 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
PDXDC1-216ENST00000569715 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
PDXDC1-216ENST00000569715 CFAP65Q6ZU64 1925 aaKnown RBP15.57■□□□□ 0.08
PDXDC1-216ENST00000569715 UGGT1Q9NYU2 1555 aa15.57■□□□□ 0.08
PDXDC1-216ENST00000569715 CAMSAP1Q5T5Y3 1602 aa15.57■□□□□ 0.08
PDXDC1-216ENST00000569715 ARHGEF40Q8TER5 1519 aa15.56■□□□□ 0.08
PDXDC1-216ENST00000569715 RGL3Q3MIN7 710 aa15.56■□□□□ 0.08
PDXDC1-216ENST00000569715 NPATQ14207 1427 aa15.55■□□□□ 0.08
PDXDC1-216ENST00000569715 DCAF11Q8TEB1 546 aa15.55■□□□□ 0.08
PDXDC1-216ENST00000569715 KDM2AQ9Y2K7 1162 aa15.55■□□□□ 0.08
PDXDC1-216ENST00000569715 REREQ9P2R6 1566 aa15.55■□□□□ 0.08
PDXDC1-216ENST00000569715 UHRF1BP1Q6BDS2 1440 aa15.54■□□□□ 0.08
PDXDC1-216ENST00000569715 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
PDXDC1-216ENST00000569715 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
PDXDC1-216ENST00000569715 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
PDXDC1-216ENST00000569715 ZC3H13Q5T200 1668 aaKnown RBP15.53■□□□□ 0.08
PDXDC1-216ENST00000569715 HSPA5P11021 654 aaKnown RBP15.51■□□□□ 0.07
PDXDC1-216ENST00000569715 AGLP35573 1532 aa15.51■□□□□ 0.07
PDXDC1-216ENST00000569715 RALGAPBQ86X10 1494 aa15.5■□□□□ 0.07
PDXDC1-216ENST00000569715 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
PDXDC1-216ENST00000569715 PRAG1Q86YV5 1406 aa15.49■□□□□ 0.07
PDXDC1-216ENST00000569715 KIF1BO60333 1816 aa15.48■□□□□ 0.07
PDXDC1-216ENST00000569715 TRPM1Q7Z4N2 1603 aa15.48■□□□□ 0.07
PDXDC1-216ENST00000569715 EIF4G2P78344 907 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDXDC1-216ENST00000569715 SYNMO15061 1565 aa15.47■□□□□ 0.07
PDXDC1-216ENST00000569715 CLTCQ00610 1675 aaKnown RBP15.46■□□□□ 0.06
PDXDC1-216ENST00000569715 NOS1P29475 1434 aa15.45■□□□□ 0.06
PDXDC1-216ENST00000569715 CNTLNQ9NXG0 1405 aa15.45■□□□□ 0.06
PDXDC1-216ENST00000569715 ARHGAP31Q2M1Z3 1444 aa15.45■□□□□ 0.06
PDXDC1-216ENST00000569715 MLECQ14165 292 aa15.45■□□□□ 0.06
PDXDC1-216ENST00000569715 MADDQ8WXG6 1647 aa15.44■□□□□ 0.06
PDXDC1-216ENST00000569715 PREX1Q8TCU6 1659 aa15.44■□□□□ 0.06
PDXDC1-216ENST00000569715 MIER1Q8N108 512 aa15.44■□□□□ 0.06
PDXDC1-216ENST00000569715 NEURL4Q96JN8 1562 aa15.44■□□□□ 0.06
PDXDC1-216ENST00000569715 ADGRB3O60242 1522 aa15.43■□□□□ 0.06
PDXDC1-216ENST00000569715 USP47Q96K76 1375 aa15.43■□□□□ 0.06
PDXDC1-216ENST00000569715 PIK3C2BO00750 1634 aa15.43■□□□□ 0.06
PDXDC1-216ENST00000569715 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
PDXDC1-216ENST00000569715 IFT172Q9UG01 1749 aa15.43■□□□□ 0.06
PDXDC1-216ENST00000569715 ROCK2O75116 1388 aaKnown RBP15.42■□□□□ 0.06
PDXDC1-216ENST00000569715 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
PDXDC1-216ENST00000569715 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
PDXDC1-216ENST00000569715 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
PDXDC1-216ENST00000569715 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
PDXDC1-216ENST00000569715 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
PDXDC1-216ENST00000569715 FBXO31Q5XUX0 539 aaPredicted RBP15.39■□□□□ 0.05
PDXDC1-216ENST00000569715 POLR1AO95602 1720 aaPredicted RBP15.38■□□□□ 0.05
PDXDC1-216ENST00000569715 ERVK-7P63135 1459 aa15.37■□□□□ 0.05
PDXDC1-216ENST00000569715 PPLO60437 1756 aa15.37■□□□□ 0.05
PDXDC1-216ENST00000569715 MYO5BQ9ULV0 1848 aa15.37■□□□□ 0.05
PDXDC1-216ENST00000569715 ARID4BQ4LE39 1312 aaPredicted RBP15.37■□□□□ 0.05
PDXDC1-216ENST00000569715 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
PDXDC1-216ENST00000569715 LAMC1P11047 1609 aa15.37■□□□□ 0.05
PDXDC1-216ENST00000569715 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
PDXDC1-216ENST00000569715 MYOM2P54296 1465 aa15.36■□□□□ 0.05
PDXDC1-216ENST00000569715 IDI1Q13907 227 aa15.35■□□□□ 0.05
PDXDC1-216ENST00000569715 ADGRF5Q8IZF2 1346 aa15.35■□□□□ 0.05
PDXDC1-216ENST00000569715 CCDC7Q96M83 1385 aa15.34■□□□□ 0.05
PDXDC1-216ENST00000569715 SPATA31D1Q6ZQQ2 1576 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms