RNA–Protein interactions for RNA: ENST00000569627.1

KATNB1-210, Transcript of katanin regulatory subunit B1, humanhuman

TSL 3

Gene KATNB1, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-210ENST00000569627 ZMYM3Q14202 1370 aa18.6■□□□□ 0.57
KATNB1-210ENST00000569627 FAM135AQ9P2D6 1515 aa18.59■□□□□ 0.57
KATNB1-210ENST00000569627 PREX1Q8TCU6 1659 aa18.59■□□□□ 0.57
KATNB1-210ENST00000569627 UHRF1BP1Q6BDS2 1440 aa18.58■□□□□ 0.57
KATNB1-210ENST00000569627 KDM5DQ9BY66 1539 aa18.58■□□□□ 0.56
KATNB1-210ENST00000569627 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
KATNB1-210ENST00000569627 SETD1BQ9UPS6 1966 aaKnown RBP18.57■□□□□ 0.56
KATNB1-210ENST00000569627 ITGAEP38570 1179 aa18.56■□□□□ 0.56
KATNB1-210ENST00000569627 LMTK3Q96Q04 1460 aa18.55■□□□□ 0.56
KATNB1-210ENST00000569627 KANK1Q14678 1352 aa18.55■□□□□ 0.56
KATNB1-210ENST00000569627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
KATNB1-210ENST00000569627 RNF17Q9BXT8 1623 aaKnown RBP18.54■□□□□ 0.56
KATNB1-210ENST00000569627 NPATQ14207 1427 aa18.54■□□□□ 0.56
KATNB1-210ENST00000569627 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
KATNB1-210ENST00000569627 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
KATNB1-210ENST00000569627 ADGRL2O95490 1459 aa18.52■□□□□ 0.56
KATNB1-210ENST00000569627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
KATNB1-210ENST00000569627 HSPA2P54652 639 aa18.49■□□□□ 0.55
KATNB1-210ENST00000569627 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
KATNB1-210ENST00000569627 ANKRD50Q9ULJ7 1429 aa18.48■□□□□ 0.55
KATNB1-210ENST00000569627 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
KATNB1-210ENST00000569627 PTPRKQ15262 1439 aa18.47■□□□□ 0.55
KATNB1-210ENST00000569627 PZPP20742 1482 aa18.46■□□□□ 0.55
KATNB1-210ENST00000569627 ABCC3O15438 1527 aa18.45■□□□□ 0.54
KATNB1-210ENST00000569627 PRDM15P57071 1507 aaPredicted RBP18.45■□□□□ 0.54
KATNB1-210ENST00000569627 CEP152O94986 1710 aa18.44■□□□□ 0.54
KATNB1-210ENST00000569627 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
KATNB1-210ENST00000569627 CAMSAP1Q5T5Y3 1602 aa18.43■□□□□ 0.54
KATNB1-210ENST00000569627 MYO3AQ8NEV4 1616 aa18.43■□□□□ 0.54
KATNB1-210ENST00000569627 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
KATNB1-210ENST00000569627 TNRQ92752 1358 aa18.42■□□□□ 0.54
KATNB1-210ENST00000569627 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
KATNB1-210ENST00000569627 FBXO31Q5XUX0 539 aaPredicted RBP18.41■□□□□ 0.54
KATNB1-210ENST00000569627 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
KATNB1-210ENST00000569627 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
KATNB1-210ENST00000569627 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
KATNB1-210ENST00000569627 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
KATNB1-210ENST00000569627 ARHGAP31Q2M1Z3 1444 aa18.36■□□□□ 0.53
KATNB1-210ENST00000569627 CFAP65Q6ZU64 1925 aaKnown RBP18.35■□□□□ 0.53
KATNB1-210ENST00000569627 LMTK2Q8IWU2 1503 aa18.34■□□□□ 0.53
KATNB1-210ENST00000569627 ERVK-7P63135 1459 aa18.34■□□□□ 0.53
KATNB1-210ENST00000569627 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
KATNB1-210ENST00000569627 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
KATNB1-210ENST00000569627 UNC13BO14795 1591 aa18.33■□□□□ 0.52
KATNB1-210ENST00000569627 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
KATNB1-210ENST00000569627 VWDEQ8N2E2 1590 aa18.32■□□□□ 0.52
KATNB1-210ENST00000569627 UGGT1Q9NYU2 1555 aa18.31■□□□□ 0.52
KATNB1-210ENST00000569627 PKD2Q13563 968 aa18.31■□□□□ 0.52
KATNB1-210ENST00000569627 NUP155O75694 1391 aa18.3■□□□□ 0.52
KATNB1-210ENST00000569627 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
KATNB1-210ENST00000569627 PLA2R1Q13018 1463 aa18.3■□□□□ 0.52
KATNB1-210ENST00000569627 TET3O43151 1660 aa18.29■□□□□ 0.52
KATNB1-210ENST00000569627 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
KATNB1-210ENST00000569627 STRCQ7RTU9 1775 aa18.29■□□□□ 0.52
KATNB1-210ENST00000569627 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
KATNB1-210ENST00000569627 PTPRTO14522 1441 aa18.26■□□□□ 0.51
KATNB1-210ENST00000569627 ANKLE2Q86XL3 938 aa18.26■□□□□ 0.51
KATNB1-210ENST00000569627 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
KATNB1-210ENST00000569627 NCKAP5LQ9HCH0 1330 aa18.25■□□□□ 0.51
KATNB1-210ENST00000569627 HFM1A2PYH4 1435 aa18.25■□□□□ 0.51
KATNB1-210ENST00000569627 NAIPQ13075 1403 aa18.25■□□□□ 0.51
KATNB1-210ENST00000569627 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
KATNB1-210ENST00000569627 SLC52A1Q9NWF4 448 aa18.24■□□□□ 0.51
KATNB1-210ENST00000569627 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
KATNB1-210ENST00000569627 ACIN1Q9UKV3 1341 aaKnown RBP18.22■□□□□ 0.51
KATNB1-210ENST00000569627 EID1Q9Y6B2 187 aa18.21■□□□□ 0.51
KATNB1-210ENST00000569627 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
KATNB1-210ENST00000569627 NOS1P29475 1434 aa18.19■□□□□ 0.5
KATNB1-210ENST00000569627 PIK3C2BO00750 1634 aa18.19■□□□□ 0.5
KATNB1-210ENST00000569627 E9PCH4 1651 aa18.18■□□□□ 0.5
KATNB1-210ENST00000569627 IDI1Q13907 227 aa18.18■□□□□ 0.5
KATNB1-210ENST00000569627 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
KATNB1-210ENST00000569627 KDM5AP29375 1690 aaKnown RBP18.17■□□□□ 0.5
KATNB1-210ENST00000569627 SYNMO15061 1565 aa18.17■□□□□ 0.5
KATNB1-210ENST00000569627 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
KATNB1-210ENST00000569627 TXNDC2Q86VQ3 553 aa18.15■□□□□ 0.5
KATNB1-210ENST00000569627 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
KATNB1-210ENST00000569627 NPHP4O75161 1426 aaPredicted RBP18.14■□□□□ 0.49
KATNB1-210ENST00000569627 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
KATNB1-210ENST00000569627 CERKQ8TCT0 537 aa18.13■□□□□ 0.49
KATNB1-210ENST00000569627 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
KATNB1-210ENST00000569627 BCANQ96GW7 911 aa18.12■□□□□ 0.49
KATNB1-210ENST00000569627 TMEM2Q9UHN6 1383 aa18.12■□□□□ 0.49
KATNB1-210ENST00000569627 SLIT1O75093 1534 aa18.12■□□□□ 0.49
KATNB1-210ENST00000569627 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
KATNB1-210ENST00000569627 SETD5Q9C0A6 1442 aa18.11■□□□□ 0.49
KATNB1-210ENST00000569627 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
KATNB1-210ENST00000569627 SPHKAPQ2M3C7 1700 aa18.11■□□□□ 0.49
KATNB1-210ENST00000569627 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
KATNB1-210ENST00000569627 MED14O60244 1454 aa18.1■□□□□ 0.49
KATNB1-210ENST00000569627 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.49
KATNB1-210ENST00000569627 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.48
KATNB1-210ENST00000569627 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
KATNB1-210ENST00000569627 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
KATNB1-210ENST00000569627 FBXO41Q8TF61 875 aa18.06■□□□□ 0.48
KATNB1-210ENST00000569627 LTKP29376 864 aa18.05■□□□□ 0.48
KATNB1-210ENST00000569627 TMEM131LA2VDJ0 1609 aa18.05■□□□□ 0.48
KATNB1-210ENST00000569627 MYO5BQ9ULV0 1848 aa18.03■□□□□ 0.48
KATNB1-210ENST00000569627 MPHOSPH9Q99550 1183 aa18.03■□□□□ 0.48
KATNB1-210ENST00000569627 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms