RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 ILDR1Q86SU0 546 aaPredicted RBP28.07■■■□□ 2.08
SIN3A-212ENST00000568919 CHIC2Q9UKJ5 165 aa28.07■■■□□ 2.08
SIN3A-212ENST00000568919 DUOX2Q9NRD8 1548 aa28.07■■■□□ 2.08
SIN3A-212ENST00000568919 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
SIN3A-212ENST00000568919 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
SIN3A-212ENST00000568919 FBXO31Q5XUX0 539 aaPredicted RBP28.06■■■□□ 2.08
SIN3A-212ENST00000568919 KIF15Q9NS87 1388 aa28.06■■■□□ 2.08
SIN3A-212ENST00000568919 KDM5DQ9BY66 1539 aa28.06■■■□□ 2.08
SIN3A-212ENST00000568919 STRCQ7RTU9 1775 aa28.06■■■□□ 2.08
SIN3A-212ENST00000568919 FAM135AQ9P2D6 1515 aa28.05■■■□□ 2.08
SIN3A-212ENST00000568919 DMRT2Q9Y5R5 561 aa28.05■■■□□ 2.08
SIN3A-212ENST00000568919 EIF2AK4Q9P2K8 1649 aaKnown RBP28.03■■■□□ 2.08
SIN3A-212ENST00000568919 PPARGC1BQ86YN6 1023 aaKnown RBP28.02■■■□□ 2.08
SIN3A-212ENST00000568919 RNF17Q9BXT8 1623 aaKnown RBP28.02■■■□□ 2.08
SIN3A-212ENST00000568919 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
SIN3A-212ENST00000568919 PZPP20742 1482 aa27.99■■■□□ 2.07
SIN3A-212ENST00000568919 TNRQ92752 1358 aa27.97■■■□□ 2.07
SIN3A-212ENST00000568919 MYO3AQ8NEV4 1616 aa27.96■■■□□ 2.07
SIN3A-212ENST00000568919 NCOA1Q15788 1441 aa27.96■■■□□ 2.07
SIN3A-212ENST00000568919 ERBINQ96RT1 1412 aa27.96■■■□□ 2.07
SIN3A-212ENST00000568919 ABCC3O15438 1527 aa27.95■■■□□ 2.06
SIN3A-212ENST00000568919 CAMSAP1Q5T5Y3 1602 aa27.95■■■□□ 2.06
SIN3A-212ENST00000568919 MROH1Q8NDA8 1641 aa27.95■■■□□ 2.06
SIN3A-212ENST00000568919 ZNF142P52746 1687 aaPredicted RBP27.92■■■□□ 2.06
SIN3A-212ENST00000568919 CEP170BQ9Y4F5 1589 aaPredicted RBP27.92■■■□□ 2.06
SIN3A-212ENST00000568919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.92■■■□□ 2.063e-9■■■□□ 16
SIN3A-212ENST00000568919 PTPRTO14522 1441 aa27.92■■■□□ 2.06
SIN3A-212ENST00000568919 NCKAP5LQ9HCH0 1330 aa27.92■■■□□ 2.06
SIN3A-212ENST00000568919 A2ML1A8K2U0 1454 aa27.9■■■□□ 2.06
SIN3A-212ENST00000568919 ZC3H13Q5T200 1668 aaKnown RBP27.9■■■□□ 2.06
SIN3A-212ENST00000568919 ADGRL2O95490 1459 aa27.89■■■□□ 2.06
SIN3A-212ENST00000568919 FBXO41Q8TF61 875 aa27.88■■■□□ 2.05
SIN3A-212ENST00000568919 CEP152O94986 1710 aa27.87■■■□□ 2.05
SIN3A-212ENST00000568919 PKD2Q13563 968 aa27.86■■■□□ 2.05
SIN3A-212ENST00000568919 CERKQ8TCT0 537 aa27.86■■■□□ 2.05
SIN3A-212ENST00000568919 CFAP65Q6ZU64 1925 aaKnown RBP27.85■■■□□ 2.05
SIN3A-212ENST00000568919 PLA2R1Q13018 1463 aa27.85■■■□□ 2.05
SIN3A-212ENST00000568919 PRDM15P57071 1507 aaPredicted RBP27.84■■■□□ 2.05
SIN3A-212ENST00000568919 KANK1Q14678 1352 aa27.83■■■□□ 2.05
SIN3A-212ENST00000568919 DEPDC5O75140 1603 aa27.82■■■□□ 2.04
SIN3A-212ENST00000568919 NLRP1Q9C000 1473 aa27.81■■■□□ 2.04
SIN3A-212ENST00000568919 THEMISQ8N1K5 641 aaPredicted RBP27.8■■■□□ 2.04
SIN3A-212ENST00000568919 ERVK-7P63135 1459 aa27.8■■■□□ 2.04
SIN3A-212ENST00000568919 SPATA31D1Q6ZQQ2 1576 aa27.8■■■□□ 2.04
SIN3A-212ENST00000568919 ARHGAP31Q2M1Z3 1444 aa27.79■■■□□ 2.04
SIN3A-212ENST00000568919 ANKRD50Q9ULJ7 1429 aa27.79■■■□□ 2.04
SIN3A-212ENST00000568919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.78■■■□□ 2.049e-8■■■□□ 15.5
SIN3A-212ENST00000568919 ITGAEP38570 1179 aa27.78■■■□□ 2.04
SIN3A-212ENST00000568919 ROCK1Q13464 1354 aa27.74■■■□□ 2.03
SIN3A-212ENST00000568919 VWDEQ8N2E2 1590 aa27.74■■■□□ 2.03
SIN3A-212ENST00000568919 UGGT1Q9NYU2 1555 aa27.74■■■□□ 2.03
SIN3A-212ENST00000568919 ANKLE2Q86XL3 938 aa27.73■■■□□ 2.03
SIN3A-212ENST00000568919 LMTK2Q8IWU2 1503 aa27.72■■■□□ 2.03
SIN3A-212ENST00000568919 LTBP4Q8N2S1 1624 aa27.67■■■□□ 2.02
SIN3A-212ENST00000568919 ZNF335Q9H4Z2 1342 aaPredicted RBP27.67■■■□□ 2.02
SIN3A-212ENST00000568919 RRBP1Q9P2E9 1410 aaKnown RBP27.66■■■□□ 2.02
SIN3A-212ENST00000568919 POLR1AO95602 1720 aaPredicted RBP27.64■■■□□ 2.01
SIN3A-212ENST00000568919 NEURL4Q96JN8 1562 aa27.63■■■□□ 2.01
SIN3A-212ENST00000568919 IDI1Q13907 227 aa27.62■■■□□ 2.01
SIN3A-212ENST00000568919 EFCAB6Q5THR3 1501 aa27.61■■■□□ 2.01
SIN3A-212ENST00000568919 UBR1Q8IWV7 1749 aa27.6■■■□□ 2.01
SIN3A-212ENST00000568919 NOS1P29475 1434 aa27.58■■■□□ 2.01
SIN3A-212ENST00000568919 MED14O60244 1454 aa27.58■■■□□ 2.01
SIN3A-212ENST00000568919 NPHP4O75161 1426 aaPredicted RBP27.58■■■□□ 2
SIN3A-212ENST00000568919 STAG3Q9UJ98 1225 aa27.57■■■□□ 2
SIN3A-212ENST00000568919 UNC13BO14795 1591 aa27.56■■■□□ 2
SIN3A-212ENST00000568919 TXNDC2Q86VQ3 553 aa27.55■■■□□ 2
SIN3A-212ENST00000568919 SLC52A1Q9NWF4 448 aa27.55■■■□□ 2
SIN3A-212ENST00000568919 PIK3C2BO00750 1634 aa27.54■■■□□ 2
SIN3A-212ENST00000568919 TET3O43151 1660 aa27.54■■■□□ 2
SIN3A-212ENST00000568919 LTKP29376 864 aa27.54■■■□□ 2
SIN3A-212ENST00000568919 RPRD2Q5VT52 1461 aaKnown RBP27.54■■■□□ 2
SIN3A-212ENST00000568919 SYNMO15061 1565 aa27.53■■■□□ 2
SIN3A-212ENST00000568919 NUP155O75694 1391 aa27.53■■■□□ 2
SIN3A-212ENST00000568919 ARHGAP23Q9P227 1491 aa27.51■■■□□ 2
SIN3A-212ENST00000568919 SLIT1O75093 1534 aa27.51■■□□□ 1.99
SIN3A-212ENST00000568919 IQSEC2Q5JU85 1478 aa27.51■■□□□ 1.99
SIN3A-212ENST00000568919 EID1Q9Y6B2 187 aa27.5■■□□□ 1.99
SIN3A-212ENST00000568919 GCC2Q8IWJ2 1684 aa27.49■■□□□ 1.99
SIN3A-212ENST00000568919 TMEM2Q9UHN6 1383 aa27.48■■□□□ 1.99
SIN3A-212ENST00000568919 SCAF11Q99590 1463 aaKnown RBP27.48■■□□□ 1.99
SIN3A-212ENST00000568919 IQGAP1P46940 1657 aa27.48■■□□□ 1.99
SIN3A-212ENST00000568919 IQGAP3Q86VI3 1631 aa27.47■■□□□ 1.99
SIN3A-212ENST00000568919 KDM5AP29375 1690 aaKnown RBP27.46■■□□□ 1.99
SIN3A-212ENST00000568919 NAIPQ13075 1403 aa27.44■■□□□ 1.98
SIN3A-212ENST00000568919 E9PCH4 1651 aa27.44■■□□□ 1.98
SIN3A-212ENST00000568919 CPS1P31327 1500 aa27.4■■□□□ 1.98
SIN3A-212ENST00000568919 ADGRB3O60242 1522 aa27.39■■□□□ 1.98
SIN3A-212ENST00000568919 UBAP1LF5GYI3 381 aa27.37■■□□□ 1.97
SIN3A-212ENST00000568919 CHGAP10645 457 aaKnown RBP27.35■■□□□ 1.97
SIN3A-212ENST00000568919 HFM1A2PYH4 1435 aa27.34■■□□□ 1.97
SIN3A-212ENST00000568919 MYO5BQ9ULV0 1848 aa27.33■■□□□ 1.97
SIN3A-212ENST00000568919 STRCP1A6NGW2 1772 aa27.32■■□□□ 1.96
SIN3A-212ENST00000568919 TMEM131LA2VDJ0 1609 aa27.32■■□□□ 1.96
SIN3A-212ENST00000568919 HDGFP51858 240 aaKnown RBP27.32■■□□□ 1.96
SIN3A-212ENST00000568919 TRIM52Q96A61 297 aa27.32■■□□□ 1.96
SIN3A-212ENST00000568919 SLC26A8Q96RN1 970 aa27.3■■□□□ 1.96
SIN3A-212ENST00000568919 ZFYVE9O95405 1425 aa27.28■■□□□ 1.96
SIN3A-212ENST00000568919 RIMS2Q9UQ26 1411 aa27.28■■□□□ 1.96
SIN3A-212ENST00000568919 BCANQ96GW7 911 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms