RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 PAK3O75914 559 aaPredicted RBP24.7■■□□□ 1.54
PKD1-235ENST00000568591 ARHGEF12Q9NZN5 1544 aa24.7■■□□□ 1.54
PKD1-235ENST00000568591 RGL3Q3MIN7 710 aa24.69■■□□□ 1.54
PKD1-235ENST00000568591 LRPPRCP42704 1394 aaKnown RBP24.68■■□□□ 1.54
PKD1-235ENST00000568591 MYBBP1AQ9BQG0 1328 aaKnown RBP24.68■■□□□ 1.54
PKD1-235ENST00000568591 NBPF1Q3BBV0 1214 aa24.68■■□□□ 1.54
PKD1-235ENST00000568591 PTPRGP23470 1445 aa24.66■■□□□ 1.54
PKD1-235ENST00000568591 KDM5DQ9BY66 1539 aa24.66■■□□□ 1.54
PKD1-235ENST00000568591 BRD4O60885 1362 aaPredicted RBP24.63■■□□□ 1.53
PKD1-235ENST00000568591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.62■■□□□ 1.539e-7■□□□□ 8.9
PKD1-235ENST00000568591 NOP58Q9Y2X3 529 aaKnown RBP24.61■■□□□ 1.53
PKD1-235ENST00000568591 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
PKD1-235ENST00000568591 RALBP1Q15311 655 aa24.61■■□□□ 1.53
PKD1-235ENST00000568591 EXOC6Q8TAG9 804 aa24.59■■□□□ 1.53
PKD1-235ENST00000568591 E9PCH4 1651 aa24.58■■□□□ 1.53
PKD1-235ENST00000568591 SAMD9LQ8IVG5 1584 aa24.58■■□□□ 1.53
PKD1-235ENST00000568591 PRAG1Q86YV5 1406 aa24.58■■□□□ 1.53
PKD1-235ENST00000568591 NBR1Q14596 966 aa24.58■■□□□ 1.52
PKD1-235ENST00000568591 RRP1P56182 461 aaKnown RBP24.57■■□□□ 1.52
PKD1-235ENST00000568591 CDCA7LQ96GN5 454 aa24.57■■□□□ 1.52
PKD1-235ENST00000568591 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
PKD1-235ENST00000568591 CCDC144AA2RUR9 1427 aa24.56■■□□□ 1.52
PKD1-235ENST00000568591 PLA2R1Q13018 1463 aa24.55■■□□□ 1.52
PKD1-235ENST00000568591 PER1O15534 1290 aaPredicted RBP24.55■■□□□ 1.52
PKD1-235ENST00000568591 CCDC141Q6ZP82 1450 aa24.55■■□□□ 1.52
PKD1-235ENST00000568591 ARHGEF5Q12774 1597 aa24.54■■□□□ 1.52
PKD1-235ENST00000568591 NLRP13Q86W25 1043 aa24.54■■□□□ 1.52
PKD1-235ENST00000568591 PARD3Q8TEW0 1356 aa24.54■■□□□ 1.52
PKD1-235ENST00000568591 RCAN3Q9UKA8 241 aa24.53■■□□□ 1.52
PKD1-235ENST00000568591 KTN1Q86UP2 1357 aaKnown RBP24.53■■□□□ 1.52
PKD1-235ENST00000568591 DISP3Q9P2K9 1392 aa24.53■■□□□ 1.52
PKD1-235ENST00000568591 CDC42BPBQ9Y5S2 1711 aa24.52■■□□□ 1.52
PKD1-235ENST00000568591 TRPM1Q7Z4N2 1603 aa24.52■■□□□ 1.52
PKD1-235ENST00000568591 A2MP01023 1474 aa24.5■■□□□ 1.51
PKD1-235ENST00000568591 SYCP2Q9BX26 1530 aa24.5■■□□□ 1.51
PKD1-235ENST00000568591 TESK2Q96S53 571 aa24.49■■□□□ 1.51
PKD1-235ENST00000568591 PLIN1O60240 522 aa24.47■■□□□ 1.51
PKD1-235ENST00000568591 IPO9Q96P70 1041 aaKnown RBP24.46■■□□□ 1.51
PKD1-235ENST00000568591 DEKP35659 375 aaKnown RBP24.46■■□□□ 1.51
PKD1-235ENST00000568591 ANP32AP39687 249 aaKnown RBP24.46■■□□□ 1.51
PKD1-235ENST00000568591 PANK3Q9H999 370 aa24.46■■□□□ 1.51
PKD1-235ENST00000568591 PREX2Q70Z35 1606 aa24.45■■□□□ 1.51
PKD1-235ENST00000568591 SKAP1Q86WV1 359 aa24.45■■□□□ 1.5
PKD1-235ENST00000568591 PLEKHH2Q8IVE3 1493 aa24.44■■□□□ 1.5
PKD1-235ENST00000568591 COL17A1Q9UMD9 1497 aaPredicted RBP24.43■■□□□ 1.5
PKD1-235ENST00000568591 NPM2Q86SE8 214 aaKnown RBP24.42■■□□□ 1.5
PKD1-235ENST00000568591 TTC37Q6PGP7 1564 aa24.42■■□□□ 1.5
PKD1-235ENST00000568591 GPRASP1Q5JY77 1395 aa24.42■■□□□ 1.5
PKD1-235ENST00000568591 ARHGAP5Q13017 1502 aa24.41■■□□□ 1.5
PKD1-235ENST00000568591 RSPH4AQ5TD94 716 aa24.38■■□□□ 1.49
PKD1-235ENST00000568591 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
PKD1-235ENST00000568591 ZBTB47Q9UFB7 747 aaPredicted RBP24.37■■□□□ 1.49
PKD1-235ENST00000568591 PRDM15P57071 1507 aaPredicted RBP24.37■■□□□ 1.49
PKD1-235ENST00000568591 UNC13BO14795 1591 aa24.36■■□□□ 1.49
PKD1-235ENST00000568591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.36■■□□□ 1.49
PKD1-235ENST00000568591 PDE3BQ13370 1112 aa24.35■■□□□ 1.49
PKD1-235ENST00000568591 MYO5CQ9NQX4 1742 aa24.33■■□□□ 1.49
PKD1-235ENST00000568591 PDE4AP27815 886 aa24.32■■□□□ 1.48
PKD1-235ENST00000568591 CRBNQ96SW2 442 aa24.32■■□□□ 1.48
PKD1-235ENST00000568591 BLMP54132 1417 aaPredicted RBP24.32■■□□□ 1.48
PKD1-235ENST00000568591 TMF1P82094 1093 aa24.31■■□□□ 1.48
PKD1-235ENST00000568591 C20orf194Q5TEA3 1177 aa24.31■■□□□ 1.48
PKD1-235ENST00000568591 ADAMTS8Q9UP79 889 aa24.31■■□□□ 1.48
PKD1-235ENST00000568591 TCERG1O14776 1098 aaKnown RBP24.29■■□□□ 1.48
PKD1-235ENST00000568591 IQGAP3Q86VI3 1631 aa24.29■■□□□ 1.48
PKD1-235ENST00000568591 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
PKD1-235ENST00000568591 MAST1Q9Y2H9 1570 aa24.28■■□□□ 1.48
PKD1-235ENST00000568591 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
PKD1-235ENST00000568591 MAGI2Q86UL8 1455 aa24.26■■□□□ 1.47
PKD1-235ENST00000568591 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
PKD1-235ENST00000568591 BACH2Q9BYV9 841 aa24.26■■□□□ 1.47
PKD1-235ENST00000568591 LAMC1P11047 1609 aa24.24■■□□□ 1.47
PKD1-235ENST00000568591 PLXNC1O60486 1568 aa24.23■■□□□ 1.47
PKD1-235ENST00000568591 WDR7Q9Y4E6 1490 aa24.22■■□□□ 1.47
PKD1-235ENST00000568591 PLEKHH1Q9ULM0 1364 aa24.22■■□□□ 1.47
PKD1-235ENST00000568591 LAS1LQ9Y4W2 734 aaKnown RBP24.21■■□□□ 1.47
PKD1-235ENST00000568591 PPP2R1AP30153 589 aa24.21■■□□□ 1.47
PKD1-235ENST00000568591 DUOX2Q9NRD8 1548 aa24.21■■□□□ 1.47
PKD1-235ENST00000568591 EIF2AK4Q9P2K8 1649 aaKnown RBP24.2■■□□□ 1.47
PKD1-235ENST00000568591 ATP10AO60312 1499 aa24.2■■□□□ 1.46
PKD1-235ENST00000568591 ZMYM4Q5VZL5 1548 aa24.19■■□□□ 1.46
PKD1-235ENST00000568591 TRAPPC8Q9Y2L5 1435 aa24.19■■□□□ 1.46
PKD1-235ENST00000568591 CHD1O14646 1710 aa24.18■■□□□ 1.46
PKD1-235ENST00000568591 KNSTRNQ9Y448 316 aa24.18■■□□□ 1.46
PKD1-235ENST00000568591 AMER1Q5JTC6 1135 aaPredicted RBP24.17■■□□□ 1.46
PKD1-235ENST00000568591 RNF17Q9BXT8 1623 aaKnown RBP24.16■■□□□ 1.46
PKD1-235ENST00000568591 RTL5Q5HYW3 569 aaPredicted RBP24.16■■□□□ 1.46
PKD1-235ENST00000568591 AFAP1Q8N556 730 aa24.16■■□□□ 1.46
PKD1-235ENST00000568591 MS4A1P11836 297 aa24.15■■□□□ 1.46
PKD1-235ENST00000568591 DUSP27Q5VZP5 1158 aa24.15■■□□□ 1.46
PKD1-235ENST00000568591 ABCC2Q92887 1545 aa24.14■■□□□ 1.45
PKD1-235ENST00000568591 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
PKD1-235ENST00000568591 CCDC146Q8IYE0 955 aa24.13■■□□□ 1.45
PKD1-235ENST00000568591 INSRP06213 1382 aa24.13■■□□□ 1.45
PKD1-235ENST00000568591 MADDQ8WXG6 1647 aa24.12■■□□□ 1.45
PKD1-235ENST00000568591 PLCH2O75038 1416 aa24.12■■□□□ 1.45
PKD1-235ENST00000568591 EFCAB2Q5VUJ9 269 aa24.11■■□□□ 1.45
PKD1-235ENST00000568591 SPINK5Q9NQ38 1064 aaPredicted RBP24.09■■□□□ 1.45
PKD1-235ENST00000568591 ZNF521Q96K83 1311 aa24.09■■□□□ 1.45
PKD1-235ENST00000568591 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms