RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 A0A0U1RQG5 324 aaPredicted RBP20.54■□□□□ 0.88
TSC2-222ENST00000568454 NOL8Q76FK4 1167 aaKnown RBP20.54■□□□□ 0.88
TSC2-222ENST00000568454 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
TSC2-222ENST00000568454 NUP155O75694 1391 aa20.54■□□□□ 0.88
TSC2-222ENST00000568454 EXOC6Q8TAG9 804 aa20.52■□□□□ 0.88
TSC2-222ENST00000568454 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.88
TSC2-222ENST00000568454 GPS2Q13227 327 aa20.52■□□□□ 0.88
TSC2-222ENST00000568454 CCDC146Q8IYE0 955 aa20.52■□□□□ 0.88
TSC2-222ENST00000568454 LMOD3Q0VAK6 560 aa20.52■□□□□ 0.88
TSC2-222ENST00000568454 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.52■□□□□ 0.88
TSC2-222ENST00000568454 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.87
TSC2-222ENST00000568454 ZNF771Q7L3S4 317 aaPredicted RBP20.51■□□□□ 0.87
TSC2-222ENST00000568454 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
TSC2-222ENST00000568454 GOLGA6L19H0YKK7 550 aa20.5■□□□□ 0.87
TSC2-222ENST00000568454 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
TSC2-222ENST00000568454 CHMP5Q9NZZ3 219 aa20.49■□□□□ 0.87
TSC2-222ENST00000568454 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
TSC2-222ENST00000568454 ISY1Q9ULR0 285 aaKnown RBP20.49■□□□□ 0.87
TSC2-222ENST00000568454 SF3A1Q15459 793 aaKnown RBP20.48■□□□□ 0.87
TSC2-222ENST00000568454 FOXD4L5Q5VV16 416 aaPredicted RBP20.48■□□□□ 0.87
TSC2-222ENST00000568454 FOXD4L4Q8WXT5 416 aaPredicted RBP20.48■□□□□ 0.87
TSC2-222ENST00000568454 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
TSC2-222ENST00000568454 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
TSC2-222ENST00000568454 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
TSC2-222ENST00000568454 E9PSI1 815 aa20.46■□□□□ 0.87
TSC2-222ENST00000568454 BECN2A8MW95 431 aa20.46■□□□□ 0.87
TSC2-222ENST00000568454 STK26Q9P289 416 aa20.46■□□□□ 0.87
TSC2-222ENST00000568454 GORABQ5T7V8 394 aa20.46■□□□□ 0.87
TSC2-222ENST00000568454 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
TSC2-222ENST00000568454 FAM43AQ8N2R8 423 aa20.45■□□□□ 0.86
TSC2-222ENST00000568454 FAM13BQ9NYF5 915 aa20.45■□□□□ 0.86
TSC2-222ENST00000568454 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
TSC2-222ENST00000568454 SLC4A10Q6U841 1118 aa20.44■□□□□ 0.86
TSC2-222ENST00000568454 RASSF8Q8NHQ8 419 aa20.43■□□□□ 0.86
TSC2-222ENST00000568454 TEX35Q5T0J7 233 aa20.42■□□□□ 0.86
TSC2-222ENST00000568454 PLIN1O60240 522 aa20.42■□□□□ 0.86
TSC2-222ENST00000568454 H3BQV1 296 aa20.42■□□□□ 0.86
TSC2-222ENST00000568454 IFFO2Q5TF58 517 aa20.42■□□□□ 0.86
TSC2-222ENST00000568454 ANKRD45Q5TZF3 282 aa20.41■□□□□ 0.86
TSC2-222ENST00000568454 CCDC70Q6NSX1 233 aa20.4■□□□□ 0.86
TSC2-222ENST00000568454 TSR1Q2NL82 804 aaKnown RBP20.4■□□□□ 0.86
TSC2-222ENST00000568454 MAP7D2Q96T17 732 aa20.39■□□□□ 0.86
TSC2-222ENST00000568454 MTERF4Q7Z6M4 381 aaKnown RBP20.39■□□□□ 0.85
TSC2-222ENST00000568454 CCAR2Q8N163 923 aaKnown RBP20.39■□□□□ 0.85
TSC2-222ENST00000568454 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
TSC2-222ENST00000568454 TPM1P09493 284 aa20.39■□□□□ 0.85
TSC2-222ENST00000568454 REC8O95072 547 aa20.39■□□□□ 0.85
TSC2-222ENST00000568454 CREBRFQ8IUR6 639 aa20.38■□□□□ 0.85
TSC2-222ENST00000568454 WIZO95785 1651 aa20.38■□□□□ 0.85
TSC2-222ENST00000568454 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
TSC2-222ENST00000568454 FAM184AQ8NB25 1140 aa20.38■□□□□ 0.85
TSC2-222ENST00000568454 ZNF592Q92610 1267 aa20.36■□□□□ 0.85
TSC2-222ENST00000568454 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
TSC2-222ENST00000568454 CEP89Q96ST8 783 aa20.36■□□□□ 0.85
TSC2-222ENST00000568454 COG6Q9Y2V7 657 aa20.36■□□□□ 0.85
TSC2-222ENST00000568454 MRE11P49959 708 aa20.36■□□□□ 0.85
TSC2-222ENST00000568454 NUCB2P80303 420 aa20.35■□□□□ 0.85
TSC2-222ENST00000568454 TPD52L1Q16890 204 aaPredicted RBP20.35■□□□□ 0.85
TSC2-222ENST00000568454 RILPL2Q969X0 211 aa20.34■□□□□ 0.85
TSC2-222ENST00000568454 CHMP3Q9Y3E7 222 aa20.34■□□□□ 0.85
TSC2-222ENST00000568454 TAF7LQ5H9L4 462 aa20.34■□□□□ 0.85
TSC2-222ENST00000568454 GGT6Q6P531 493 aa20.34■□□□□ 0.85
TSC2-222ENST00000568454 DDX19BQ9UMR2 479 aa20.34■□□□□ 0.85
TSC2-222ENST00000568454 PANK3Q9H999 370 aa20.33■□□□□ 0.85
TSC2-222ENST00000568454 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
TSC2-222ENST00000568454 RRP7AQ9Y3A4 280 aaKnown RBP20.32■□□□□ 0.84
TSC2-222ENST00000568454 BCL2L13Q9BXK5 485 aa20.31■□□□□ 0.84
TSC2-222ENST00000568454 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
TSC2-222ENST00000568454 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
TSC2-222ENST00000568454 CARMIL2Q6F5E8 1435 aa20.31■□□□□ 0.84
TSC2-222ENST00000568454 DIAPH3Q9NSV4 1193 aa20.3■□□□□ 0.84
TSC2-222ENST00000568454 PES1O00541 588 aaKnown RBP20.29■□□□□ 0.84
TSC2-222ENST00000568454 RUFY2Q8WXA3 655 aa20.29■□□□□ 0.84
TSC2-222ENST00000568454 TPM2P07951 284 aa20.29■□□□□ 0.84
TSC2-222ENST00000568454 ARGLU1Q9NWB6 273 aaPredicted RBP20.29■□□□□ 0.84
TSC2-222ENST00000568454 AAMPQ13685 434 aa20.29■□□□□ 0.84
TSC2-222ENST00000568454 PDS5BQ9NTI5 1447 aa20.29■□□□□ 0.84
TSC2-222ENST00000568454 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
TSC2-222ENST00000568454 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
TSC2-222ENST00000568454 HOMER1Q86YM7 354 aa20.28■□□□□ 0.84
TSC2-222ENST00000568454 CCDC39Q9UFE4 941 aa20.28■□□□□ 0.84
TSC2-222ENST00000568454 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
TSC2-222ENST00000568454 PAK3O75914 559 aaPredicted RBP20.27■□□□□ 0.83
TSC2-222ENST00000568454 IPO7O95373 1038 aaKnown RBP20.27■□□□□ 0.83
TSC2-222ENST00000568454 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.83
TSC2-222ENST00000568454 RSPH4AQ5TD94 716 aa20.27■□□□□ 0.83
TSC2-222ENST00000568454 USP47Q96K76 1375 aa20.26■□□□□ 0.83
TSC2-222ENST00000568454 NOM1Q5C9Z4 860 aaKnown RBP20.26■□□□□ 0.83
TSC2-222ENST00000568454 TOMM22Q9NS69 142 aa20.26■□□□□ 0.83
TSC2-222ENST00000568454 CSB-PGBD3P0DP91 1061 aa20.25■□□□□ 0.83
TSC2-222ENST00000568454 DZIP1LQ8IYY4 767 aaKnown RBP20.25■□□□□ 0.83
TSC2-222ENST00000568454 CPLX2Q6PUV4 134 aaKnown RBP20.24■□□□□ 0.83
TSC2-222ENST00000568454 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
TSC2-222ENST00000568454 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
TSC2-222ENST00000568454 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
TSC2-222ENST00000568454 ACBD3Q9H3P7 528 aa20.24■□□□□ 0.83
TSC2-222ENST00000568454 PDE4CQ08493 712 aa20.23■□□□□ 0.83
TSC2-222ENST00000568454 MCTP1Q6DN14 999 aa20.23■□□□□ 0.83
TSC2-222ENST00000568454 R3HCC1Q9Y3T6 440 aaKnown RBP20.23■□□□□ 0.83
TSC2-222ENST00000568454 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms