RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 KIAA1107Q9UPP5 1409 aa7.35□□□□□ -1.23
HERPUD1-213ENST00000568358 ABCA6Q8N139 1617 aa7.35□□□□□ -1.23
HERPUD1-213ENST00000568358 REREQ9P2R6 1566 aa7.35□□□□□ -1.23
HERPUD1-213ENST00000568358 RSPH4AQ5TD94 716 aa7.35□□□□□ -1.23
HERPUD1-213ENST00000568358 SUPT6HQ7KZ85 1726 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-213ENST00000568358 UHRF1BP1Q6BDS2 1440 aa7.35□□□□□ -1.23
HERPUD1-213ENST00000568358 CNTLNQ9NXG0 1405 aa7.35□□□□□ -1.23
HERPUD1-213ENST00000568358 SAMD9LQ8IVG5 1584 aa7.34□□□□□ -1.23
HERPUD1-213ENST00000568358 AGLP35573 1532 aa7.34□□□□□ -1.23
HERPUD1-213ENST00000568358 SYCP2Q9BX26 1530 aa7.34□□□□□ -1.23
HERPUD1-213ENST00000568358 LOC105371045A0A1W2PR82 267 aa7.34□□□□□ -1.23
HERPUD1-213ENST00000568358 GGT6Q6P531 493 aa7.34□□□□□ -1.23
HERPUD1-213ENST00000568358 EHBP1L1Q8N3D4 1523 aa7.33□□□□□ -1.24
HERPUD1-213ENST00000568358 C3P01024 1663 aa7.33□□□□□ -1.24
HERPUD1-213ENST00000568358 TSPY4P0CV99 314 aa7.33□□□□□ -1.24
HERPUD1-213ENST00000568358 TSPY10P0CW01 314 aa7.33□□□□□ -1.24
HERPUD1-213ENST00000568358 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
HERPUD1-213ENST00000568358 ZMYM3Q14202 1370 aa7.32□□□□□ -1.24
HERPUD1-213ENST00000568358 ATP7AQ04656 1500 aa7.32□□□□□ -1.24
HERPUD1-213ENST00000568358 ADGBQ8N7X0 1667 aa7.32□□□□□ -1.24
HERPUD1-213ENST00000568358 ZNF644Q9H582 1327 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-213ENST00000568358 A2MP01023 1474 aa7.31□□□□□ -1.24
HERPUD1-213ENST00000568358 TIMELESSQ9UNS1 1208 aa7.31□□□□□ -1.24
HERPUD1-213ENST00000568358 TIAM1Q13009 1591 aa7.3□□□□□ -1.24
HERPUD1-213ENST00000568358 HAP1P54257 671 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-213ENST00000568358 TPRNQ4KMQ1 711 aa7.3□□□□□ -1.24
HERPUD1-213ENST00000568358 ATF5Q9Y2D1 282 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-213ENST00000568358 MROH2AA6NES4 1674 aa7.3□□□□□ -1.24
HERPUD1-213ENST00000568358 RTEL1-TNFRSF6BF6WH68 1400 aa7.29□□□□□ -1.24
HERPUD1-213ENST00000568358 KIF3BO15066 747 aa7.29□□□□□ -1.24
HERPUD1-213ENST00000568358 NCOA2Q15596 1464 aa7.29□□□□□ -1.24
HERPUD1-213ENST00000568358 CLTCQ00610 1675 aaKnown RBP7.28□□□□□ -1.24
HERPUD1-213ENST00000568358 STRCQ7RTU9 1775 aa7.28□□□□□ -1.24
HERPUD1-213ENST00000568358 NPATQ14207 1427 aa7.28□□□□□ -1.24
HERPUD1-213ENST00000568358 VPS8Q8N3P4 1428 aa7.28□□□□□ -1.24
HERPUD1-213ENST00000568358 DHX29Q7Z478 1369 aaKnown RBP7.28□□□□□ -1.24
HERPUD1-213ENST00000568358 INO80Q9ULG1 1556 aaPredicted RBP7.28□□□□□ -1.24
HERPUD1-213ENST00000568358 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.24
HERPUD1-213ENST00000568358 PKD2Q13563 968 aa7.27□□□□□ -1.25
HERPUD1-213ENST00000568358 CCDC141Q6ZP82 1450 aa7.27□□□□□ -1.25
HERPUD1-213ENST00000568358 MBD5Q9P267 1494 aa7.27□□□□□ -1.25
HERPUD1-213ENST00000568358 PTPRTO14522 1441 aa7.27□□□□□ -1.25
HERPUD1-213ENST00000568358 CAMSAP2Q08AD1 1489 aa7.26□□□□□ -1.25
HERPUD1-213ENST00000568358 LRRC9Q6ZRR7 1453 aa7.26□□□□□ -1.25
HERPUD1-213ENST00000568358 PLXNC1O60486 1568 aa7.25□□□□□ -1.25
HERPUD1-213ENST00000568358 CFAP65Q6ZU64 1925 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-213ENST00000568358 CAMSAP1Q5T5Y3 1602 aa7.25□□□□□ -1.25
HERPUD1-213ENST00000568358 NCKAP5LQ9HCH0 1330 aa7.25□□□□□ -1.25
HERPUD1-213ENST00000568358 MAP3K1Q13233 1512 aa7.24□□□□□ -1.25
HERPUD1-213ENST00000568358 KANK4Q5T7N3 995 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-213ENST00000568358 PTPRKQ15262 1439 aa7.24□□□□□ -1.25
HERPUD1-213ENST00000568358 ARHGEF5Q12774 1597 aa7.24□□□□□ -1.25
HERPUD1-213ENST00000568358 THEMISQ8N1K5 641 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-213ENST00000568358 AKT1S1Q96B36 256 aa7.23□□□□□ -1.25
HERPUD1-213ENST00000568358 NCOA1Q15788 1441 aa7.23□□□□□ -1.25
HERPUD1-213ENST00000568358 MIA2Q96PC5 1412 aa7.23□□□□□ -1.25
HERPUD1-213ENST00000568358 MYOM3Q5VTT5 1437 aa7.22□□□□□ -1.25
HERPUD1-213ENST00000568358 FBXO31Q5XUX0 539 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-213ENST00000568358 ANKLE2Q86XL3 938 aa7.22□□□□□ -1.25
HERPUD1-213ENST00000568358 MYO3AQ8NEV4 1616 aa7.22□□□□□ -1.25
HERPUD1-213ENST00000568358 KDM5DQ9BY66 1539 aa7.22□□□□□ -1.25
HERPUD1-213ENST00000568358 FAM135AQ9P2D6 1515 aa7.22□□□□□ -1.25
HERPUD1-213ENST00000568358 TNRQ92752 1358 aa7.21□□□□□ -1.25
HERPUD1-213ENST00000568358 CEP170BQ9Y4F5 1589 aaPredicted RBP7.21□□□□□ -1.25
HERPUD1-213ENST00000568358 CHRDL2Q6WN34 429 aa7.21□□□□□ -1.26
HERPUD1-213ENST00000568358 ERICH6Q7L0X2 663 aa7.21□□□□□ -1.26
HERPUD1-213ENST00000568358 PLA2R1Q13018 1463 aa7.21□□□□□ -1.26
HERPUD1-213ENST00000568358 ZNF142P52746 1687 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-213ENST00000568358 A2ML1A8K2U0 1454 aa7.2□□□□□ -1.26
HERPUD1-213ENST00000568358 RRP7BPQ9NSQ0 103 aa7.2□□□□□ -1.26
HERPUD1-213ENST00000568358 KDM2AQ9Y2K7 1162 aa7.2□□□□□ -1.26
HERPUD1-213ENST00000568358 PZPP20742 1482 aa7.19□□□□□ -1.26
HERPUD1-213ENST00000568358 MAST1Q9Y2H9 1570 aa7.19□□□□□ -1.26
HERPUD1-213ENST00000568358 DNMT1P26358 1616 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-213ENST00000568358 KANK1Q14678 1352 aa7.19□□□□□ -1.26
HERPUD1-213ENST00000568358 IQSEC2Q5JU85 1478 aa7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 DUOX2Q9NRD8 1548 aa7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 UBAP1LF5GYI3 381 aa7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 TULP1O00294 542 aaPredicted RBP7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 STAG3Q9UJ98 1225 aa7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 PTPN23Q9H3S7 1636 aa7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 EIF2AK4Q9P2K8 1649 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 ZNF335Q9H4Z2 1342 aaPredicted RBP7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 ZC3H13Q5T200 1668 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 POLR1AO95602 1720 aaPredicted RBP7.18□□□□□ -1.26
HERPUD1-213ENST00000568358 NLRP1Q9C000 1473 aa7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 UGGT1Q9NYU2 1555 aa7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 FAM50AQ14320 339 aaKnown RBP7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 CHIC2Q9UKJ5 165 aa7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 ANKRD30AQ9BXX3 1397 aa7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 KIF15Q9NS87 1388 aa7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 TCOF1Q13428 1488 aaKnown RBP7.17□□□□□ -1.26
HERPUD1-213ENST00000568358 LTBP4Q8N2S1 1624 aa7.16□□□□□ -1.26
HERPUD1-213ENST00000568358 RNF17Q9BXT8 1623 aaKnown RBP7.16□□□□□ -1.26
HERPUD1-213ENST00000568358 TOM1O60784 492 aa7.16□□□□□ -1.26
HERPUD1-213ENST00000568358 EID1Q9Y6B2 187 aa7.16□□□□□ -1.26
HERPUD1-213ENST00000568358 CEP152O94986 1710 aa7.15□□□□□ -1.26
HERPUD1-213ENST00000568358 DISP3Q9P2K9 1392 aa7.15□□□□□ -1.26
HERPUD1-213ENST00000568358 ABCC5O15440 1437 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms