RNA–Protein interactions for RNA: ENST00000567507.1

LPCAT4-207, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-207ENST00000567507 PTPRKQ15262 1439 aa12.99□□□□□ -0.33
LPCAT4-207ENST00000567507 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
LPCAT4-207ENST00000567507 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
LPCAT4-207ENST00000567507 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
LPCAT4-207ENST00000567507 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
LPCAT4-207ENST00000567507 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
LPCAT4-207ENST00000567507 CFDP1Q9UEE9 299 aaPredicted RBP12.97□□□□□ -0.33
LPCAT4-207ENST00000567507 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
LPCAT4-207ENST00000567507 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
LPCAT4-207ENST00000567507 SYCP2Q9BX26 1530 aa12.96□□□□□ -0.33
LPCAT4-207ENST00000567507 VWDEQ8N2E2 1590 aa12.95□□□□□ -0.34
LPCAT4-207ENST00000567507 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
LPCAT4-207ENST00000567507 CPS1P31327 1500 aa12.94□□□□□ -0.34
LPCAT4-207ENST00000567507 HRCP23327 699 aa12.94□□□□□ -0.34
LPCAT4-207ENST00000567507 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
LPCAT4-207ENST00000567507 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
LPCAT4-207ENST00000567507 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
LPCAT4-207ENST00000567507 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
LPCAT4-207ENST00000567507 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
LPCAT4-207ENST00000567507 SPAG9O60271 1321 aaKnown RBP12.91□□□□□ -0.34
LPCAT4-207ENST00000567507 A2MP01023 1474 aa12.91□□□□□ -0.34
LPCAT4-207ENST00000567507 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
LPCAT4-207ENST00000567507 ADGBQ8N7X0 1667 aa12.9□□□□□ -0.34
LPCAT4-207ENST00000567507 HNRNPMP52272 730 aaKnown RBP eCLIP12.9□□□□□ -0.34
LPCAT4-207ENST00000567507 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-207ENST00000567507 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
LPCAT4-207ENST00000567507 TOM1O60784 492 aa12.89□□□□□ -0.35
LPCAT4-207ENST00000567507 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
LPCAT4-207ENST00000567507 XIRP1Q702N8 1843 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-207ENST00000567507 RNF17Q9BXT8 1623 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-207ENST00000567507 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
LPCAT4-207ENST00000567507 GGT6Q6P531 493 aa12.87□□□□□ -0.35
LPCAT4-207ENST00000567507 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
LPCAT4-207ENST00000567507 DEPDC5O75140 1603 aa12.86□□□□□ -0.35
LPCAT4-207ENST00000567507 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
LPCAT4-207ENST00000567507 CAMSAP2Q08AD1 1489 aa12.85□□□□□ -0.35
LPCAT4-207ENST00000567507 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
LPCAT4-207ENST00000567507 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
LPCAT4-207ENST00000567507 RGS17Q9UGC6 210 aaPredicted RBP12.85□□□□□ -0.35
LPCAT4-207ENST00000567507 SYNMO15061 1565 aa12.85□□□□□ -0.35
LPCAT4-207ENST00000567507 ZC3H13Q5T200 1668 aaKnown RBP12.84□□□□□ -0.35
LPCAT4-207ENST00000567507 FBXO31Q5XUX0 539 aaPredicted RBP12.84□□□□□ -0.35
LPCAT4-207ENST00000567507 SETD5Q9C0A6 1442 aa12.84□□□□□ -0.35
LPCAT4-207ENST00000567507 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
LPCAT4-207ENST00000567507 HFM1A2PYH4 1435 aa12.83□□□□□ -0.36
LPCAT4-207ENST00000567507 DAPK1P53355 1430 aa12.83□□□□□ -0.36
LPCAT4-207ENST00000567507 ITGAEP38570 1179 aa12.83□□□□□ -0.36
LPCAT4-207ENST00000567507 TNRQ92752 1358 aa12.82□□□□□ -0.36
LPCAT4-207ENST00000567507 ABCC5O15440 1437 aa12.82□□□□□ -0.36
LPCAT4-207ENST00000567507 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
LPCAT4-207ENST00000567507 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
LPCAT4-207ENST00000567507 LRRC7Q96NW7 1537 aa12.82□□□□□ -0.36
LPCAT4-207ENST00000567507 MED14O60244 1454 aa12.81□□□□□ -0.36
LPCAT4-207ENST00000567507 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
LPCAT4-207ENST00000567507 PZPP20742 1482 aa12.8□□□□□ -0.36
LPCAT4-207ENST00000567507 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
LPCAT4-207ENST00000567507 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
LPCAT4-207ENST00000567507 ADGRL2O95490 1459 aa12.79□□□□□ -0.36
LPCAT4-207ENST00000567507 CCDC141Q6ZP82 1450 aa12.79□□□□□ -0.36
LPCAT4-207ENST00000567507 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
LPCAT4-207ENST00000567507 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
LPCAT4-207ENST00000567507 DHX29Q7Z478 1369 aaKnown RBP12.78□□□□□ -0.36
LPCAT4-207ENST00000567507 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
LPCAT4-207ENST00000567507 NAIPQ13075 1403 aa12.77□□□□□ -0.37
LPCAT4-207ENST00000567507 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
LPCAT4-207ENST00000567507 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
LPCAT4-207ENST00000567507 RTEL1-TNFRSF6BF6WH68 1400 aa12.76□□□□□ -0.37
LPCAT4-207ENST00000567507 THEMISQ8N1K5 641 aaPredicted RBP12.75□□□□□ -0.37
LPCAT4-207ENST00000567507 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
LPCAT4-207ENST00000567507 NLRP1Q9C000 1473 aa12.75□□□□□ -0.37
LPCAT4-207ENST00000567507 FAM135AQ9P2D6 1515 aa12.75□□□□□ -0.37
LPCAT4-207ENST00000567507 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
LPCAT4-207ENST00000567507 MAST1Q9Y2H9 1570 aa12.74□□□□□ -0.37
LPCAT4-207ENST00000567507 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
LPCAT4-207ENST00000567507 KIF3BO15066 747 aa12.73□□□□□ -0.37
LPCAT4-207ENST00000567507 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
LPCAT4-207ENST00000567507 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
LPCAT4-207ENST00000567507 CROCC2H7BZ55 1655 aa12.72□□□□□ -0.37
LPCAT4-207ENST00000567507 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
LPCAT4-207ENST00000567507 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.37
LPCAT4-207ENST00000567507 RRP7BPQ9NSQ0 103 aa12.7□□□□□ -0.38
LPCAT4-207ENST00000567507 GCC2Q8IWJ2 1684 aa12.7□□□□□ -0.38
LPCAT4-207ENST00000567507 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
LPCAT4-207ENST00000567507 CEP152O94986 1710 aa12.69□□□□□ -0.38
LPCAT4-207ENST00000567507 ANKRD50Q9ULJ7 1429 aa12.69□□□□□ -0.38
LPCAT4-207ENST00000567507 KIF15Q9NS87 1388 aa12.69□□□□□ -0.38
LPCAT4-207ENST00000567507 MROH1Q8NDA8 1641 aa12.68□□□□□ -0.38
LPCAT4-207ENST00000567507 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
LPCAT4-207ENST00000567507 ABCC3O15438 1527 aa12.66□□□□□ -0.38
LPCAT4-207ENST00000567507 DUOX2Q9NRD8 1548 aa12.66□□□□□ -0.38
LPCAT4-207ENST00000567507 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
LPCAT4-207ENST00000567507 ERBINQ96RT1 1412 aa12.65□□□□□ -0.38
LPCAT4-207ENST00000567507 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
LPCAT4-207ENST00000567507 LTKP29376 864 aa12.64□□□□□ -0.39
LPCAT4-207ENST00000567507 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
LPCAT4-207ENST00000567507 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
LPCAT4-207ENST00000567507 ARHGAP23Q9P227 1491 aa12.63□□□□□ -0.39
LPCAT4-207ENST00000567507 SLIT1O75093 1534 aa12.62□□□□□ -0.39
LPCAT4-207ENST00000567507 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
LPCAT4-207ENST00000567507 TRIM52Q96A61 297 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms