RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TSPY4P0CV99 314 aa25.53■■□□□ 1.68
CLN6-208ENST00000567060 TSPY10P0CW01 314 aa25.53■■□□□ 1.68
CLN6-208ENST00000567060 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
CLN6-208ENST00000567060 MAST1Q9Y2H9 1570 aa25.52■■□□□ 1.68
CLN6-208ENST00000567060 INO80Q9ULG1 1556 aaPredicted RBP25.51■■□□□ 1.67
CLN6-208ENST00000567060 ATP7AQ04656 1500 aa25.49■■□□□ 1.67
CLN6-208ENST00000567060 PTPRKQ15262 1439 aa25.49■■□□□ 1.67
CLN6-208ENST00000567060 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
CLN6-208ENST00000567060 GGT6Q6P531 493 aa25.49■■□□□ 1.67
CLN6-208ENST00000567060 A2MP01023 1474 aa25.48■■□□□ 1.67
CLN6-208ENST00000567060 DAPK1P53355 1430 aa25.48■■□□□ 1.67
CLN6-208ENST00000567060 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
CLN6-208ENST00000567060 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
CLN6-208ENST00000567060 PLXNC1O60486 1568 aa25.48■■□□□ 1.67
CLN6-208ENST00000567060 ABCC5O15440 1437 aa25.47■■□□□ 1.67
CLN6-208ENST00000567060 PKD2Q13563 968 aa25.47■■□□□ 1.67
CLN6-208ENST00000567060 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
CLN6-208ENST00000567060 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
CLN6-208ENST00000567060 PPP6R1Q9UPN7 881 aa25.42■■□□□ 1.66
CLN6-208ENST00000567060 MYO3AQ8NEV4 1616 aa25.41■■□□□ 1.66
CLN6-208ENST00000567060 CEP170BQ9Y4F5 1589 aaPredicted RBP25.41■■□□□ 1.66
CLN6-208ENST00000567060 ZNF142P52746 1687 aaPredicted RBP25.41■■□□□ 1.66
CLN6-208ENST00000567060 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
CLN6-208ENST00000567060 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
CLN6-208ENST00000567060 ANKRD30AQ9BXX3 1397 aa25.36■■□□□ 1.65
CLN6-208ENST00000567060 ROCK1Q13464 1354 aa25.35■■□□□ 1.65
CLN6-208ENST00000567060 FBXO31Q5XUX0 539 aaPredicted RBP25.32■■□□□ 1.64
CLN6-208ENST00000567060 A2ML1A8K2U0 1454 aa25.32■■□□□ 1.64
CLN6-208ENST00000567060 DHX29Q7Z478 1369 aaKnown RBP25.31■■□□□ 1.64
CLN6-208ENST00000567060 DUOX2Q9NRD8 1548 aa25.31■■□□□ 1.64
CLN6-208ENST00000567060 KIF15Q9NS87 1388 aa25.28■■□□□ 1.64
CLN6-208ENST00000567060 HSPA1LP34931 641 aa25.26■■□□□ 1.63
CLN6-208ENST00000567060 ERBINQ96RT1 1412 aa25.26■■□□□ 1.63
CLN6-208ENST00000567060 KIF3BO15066 747 aa25.25■■□□□ 1.63
CLN6-208ENST00000567060 EIF2AK4Q9P2K8 1649 aaKnown RBP25.25■■□□□ 1.63
CLN6-208ENST00000567060 CHIC2Q9UKJ5 165 aa25.24■■□□□ 1.63
CLN6-208ENST00000567060 TNRQ92752 1358 aa25.23■■□□□ 1.63
CLN6-208ENST00000567060 NEURL4Q96JN8 1562 aa25.22■■□□□ 1.63
CLN6-208ENST00000567060 PIP4K2BP78356 416 aa25.22■■□□□ 1.63
CLN6-208ENST00000567060 TOM1O60784 492 aa25.2■■□□□ 1.62
CLN6-208ENST00000567060 ITGAEP38570 1179 aa25.2■■□□□ 1.62
CLN6-208ENST00000567060 RRP7BPQ9NSQ0 103 aa25.2■■□□□ 1.62
CLN6-208ENST00000567060 SCAF1Q9H7N4 1312 aaKnown RBP25.18■■□□□ 1.62
CLN6-208ENST00000567060 FAM135AQ9P2D6 1515 aa25.18■■□□□ 1.62
CLN6-208ENST00000567060 PZPP20742 1482 aa25.18■■□□□ 1.62
CLN6-208ENST00000567060 CPS1P31327 1500 aa25.17■■□□□ 1.62
CLN6-208ENST00000567060 WASHC2CQ9Y4E1 1318 aa25.17■■□□□ 1.62
CLN6-208ENST00000567060 ANKLE2Q86XL3 938 aa25.17■■□□□ 1.62
CLN6-208ENST00000567060 ANKRD50Q9ULJ7 1429 aa25.17■■□□□ 1.62
CLN6-208ENST00000567060 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
CLN6-208ENST00000567060 HFM1A2PYH4 1435 aa25.15■■□□□ 1.62
CLN6-208ENST00000567060 THEMISQ8N1K5 641 aaPredicted RBP25.15■■□□□ 1.62
CLN6-208ENST00000567060 KDM5DQ9BY66 1539 aa25.14■■□□□ 1.62
CLN6-208ENST00000567060 RNF17Q9BXT8 1623 aaKnown RBP25.14■■□□□ 1.61
CLN6-208ENST00000567060 VWDEQ8N2E2 1590 aa25.13■■□□□ 1.61
CLN6-208ENST00000567060 GCC2Q8IWJ2 1684 aa25.12■■□□□ 1.61
CLN6-208ENST00000567060 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
CLN6-208ENST00000567060 MED1Q15648 1581 aaPredicted RBP25.11■■□□□ 1.61
CLN6-208ENST00000567060 ALKQ9UM73 1620 aa25.1■■□□□ 1.61
CLN6-208ENST00000567060 NAIPQ13075 1403 aa25.1■■□□□ 1.61
CLN6-208ENST00000567060 MED14O60244 1454 aa25.09■■□□□ 1.61
CLN6-208ENST00000567060 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
CLN6-208ENST00000567060 DEPDC5O75140 1603 aa25.08■■□□□ 1.61
CLN6-208ENST00000567060 NPHP4O75161 1426 aaPredicted RBP25.08■■□□□ 1.61
CLN6-208ENST00000567060 UGGT1Q9NYU2 1555 aa25.07■■□□□ 1.6
CLN6-208ENST00000567060 TRIM26Q12899 539 aaPredicted RBP25.06■■□□□ 1.6
CLN6-208ENST00000567060 PRDM15P57071 1507 aaPredicted RBP25.06■■□□□ 1.6
CLN6-208ENST00000567060 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
CLN6-208ENST00000567060 KANK1Q14678 1352 aa25.03■■□□□ 1.6
CLN6-208ENST00000567060 UNC13BO14795 1591 aa25.01■■□□□ 1.59
CLN6-208ENST00000567060 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
CLN6-208ENST00000567060 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
CLN6-208ENST00000567060 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
CLN6-208ENST00000567060 LRRC7Q96NW7 1537 aa24.97■■□□□ 1.59
CLN6-208ENST00000567060 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
CLN6-208ENST00000567060 ABCC3O15438 1527 aa24.96■■□□□ 1.59
CLN6-208ENST00000567060 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
CLN6-208ENST00000567060 HRCP23327 699 aa24.95■■□□□ 1.58
CLN6-208ENST00000567060 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
CLN6-208ENST00000567060 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
CLN6-208ENST00000567060 ERVK-7P63135 1459 aa24.93■■□□□ 1.58
CLN6-208ENST00000567060 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
CLN6-208ENST00000567060 ARHGAP31Q2M1Z3 1444 aa24.9■■□□□ 1.58
CLN6-208ENST00000567060 LTKP29376 864 aa24.9■■□□□ 1.58
CLN6-208ENST00000567060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.89■■□□□ 1.58
CLN6-208ENST00000567060 NUP155O75694 1391 aa24.89■■□□□ 1.57
CLN6-208ENST00000567060 CEP152O94986 1710 aa24.87■■□□□ 1.57
CLN6-208ENST00000567060 TET3O43151 1660 aa24.86■■□□□ 1.57
CLN6-208ENST00000567060 RAB3GAP2Q9H2M9 1393 aa24.86■■□□□ 1.57
CLN6-208ENST00000567060 RGS17Q9UGC6 210 aaPredicted RBP24.86■■□□□ 1.57
CLN6-208ENST00000567060 CFAP65Q6ZU64 1925 aaKnown RBP24.86■■□□□ 1.57
CLN6-208ENST00000567060 RPRD2Q5VT52 1461 aaKnown RBP24.85■■□□□ 1.57
CLN6-208ENST00000567060 UBR1Q8IWV7 1749 aa24.84■■□□□ 1.57
CLN6-208ENST00000567060 TXNDC2Q86VQ3 553 aa24.84■■□□□ 1.57
CLN6-208ENST00000567060 SCAF11Q99590 1463 aaKnown RBP24.83■■□□□ 1.57
CLN6-208ENST00000567060 EFCAB6Q5THR3 1501 aa24.83■■□□□ 1.57
CLN6-208ENST00000567060 SYNMO15061 1565 aa24.83■■□□□ 1.57
CLN6-208ENST00000567060 ARHGAP23Q9P227 1491 aa24.83■■□□□ 1.56
CLN6-208ENST00000567060 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
CLN6-208ENST00000567060 SLIT1O75093 1534 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms