RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ROCK1Q13464 1354 aa39.72■■■■□ 3.95
NME3-209ENST00000566600 CNTLNQ9NXG0 1405 aa39.71■■■■□ 3.95
NME3-209ENST00000566600 RNF17Q9BXT8 1623 aaKnown RBP39.65■■■■□ 3.94
NME3-209ENST00000566600 FAM135AQ9P2D6 1515 aa39.63■■■■□ 3.93
NME3-209ENST00000566600 ANKRD50Q9ULJ7 1429 aa39.58■■■■□ 3.93
NME3-209ENST00000566600 MROH2AA6NES4 1674 aa39.58■■■■□ 3.93
NME3-209ENST00000566600 CLTCQ00610 1675 aaKnown RBP39.56■■■■□ 3.92
NME3-209ENST00000566600 KDM5DQ9BY66 1539 aa39.55■■■■□ 3.92
NME3-209ENST00000566600 WASHC2CQ9Y4E1 1318 aa39.54■■■■□ 3.92
NME3-209ENST00000566600 PLPPR3Q6T4P5 718 aa39.52■■■■□ 3.92
NME3-209ENST00000566600 ZMYM3Q14202 1370 aa39.51■■■■□ 3.92
NME3-209ENST00000566600 C3P01024 1663 aa39.5■■■■□ 3.91
NME3-209ENST00000566600 MROH1Q8NDA8 1641 aa39.5■■■■□ 3.91
NME3-209ENST00000566600 CEBPAP49715 358 aaPredicted RBP39.49■■■■□ 3.91
NME3-209ENST00000566600 DEPDC5O75140 1603 aa39.49■■■■□ 3.91
NME3-209ENST00000566600 PRDM15P57071 1507 aaPredicted RBP39.49■■■■□ 3.91
NME3-209ENST00000566600 ZC3H13Q5T200 1668 aaKnown RBP39.47■■■■□ 3.91
NME3-209ENST00000566600 KANK1Q14678 1352 aa39.46■■■■□ 3.91
NME3-209ENST00000566600 ABCC3O15438 1527 aa39.42■■■■□ 3.9
NME3-209ENST00000566600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.42■■■■□ 3.9
NME3-209ENST00000566600 NPATQ14207 1427 aa39.37■■■■□ 3.89
NME3-209ENST00000566600 HFM1A2PYH4 1435 aa39.36■■■■□ 3.89
NME3-209ENST00000566600 NAIPQ13075 1403 aa39.36■■■■□ 3.89
NME3-209ENST00000566600 GCC2Q8IWJ2 1684 aa39.35■■■■□ 3.89
NME3-209ENST00000566600 CEP152O94986 1710 aa39.34■■■■□ 3.89
NME3-209ENST00000566600 SETD1BQ9UPS6 1966 aaKnown RBP39.33■■■■□ 3.89
NME3-209ENST00000566600 VWDEQ8N2E2 1590 aa39.33■■■■□ 3.89
NME3-209ENST00000566600 PZPP20742 1482 aa39.32■■■■□ 3.89
NME3-209ENST00000566600 UNC13BO14795 1591 aa39.32■■■■□ 3.88
NME3-209ENST00000566600 CAMSAP1Q5T5Y3 1602 aa39.29■■■■□ 3.88
NME3-209ENST00000566600 LMTK2Q8IWU2 1503 aa39.29■■■■□ 3.88
NME3-209ENST00000566600 PREX1Q8TCU6 1659 aa39.27■■■■□ 3.88
NME3-209ENST00000566600 ARHGAP31Q2M1Z3 1444 aa39.24■■■■□ 3.87
NME3-209ENST00000566600 UHRF1BP1Q6BDS2 1440 aa39.23■■■■□ 3.87
NME3-209ENST00000566600 LMTK3Q96Q04 1460 aa39.2■■■■□ 3.87
NME3-209ENST00000566600 NUP155O75694 1391 aa39.2■■■■□ 3.87
NME3-209ENST00000566600 FBXO31Q5XUX0 539 aaPredicted RBP39.19■■■■□ 3.86
NME3-209ENST00000566600 IQGAP3Q86VI3 1631 aa39.17■■■■□ 3.86
NME3-209ENST00000566600 TNRQ92752 1358 aa39.15■■■■□ 3.86
NME3-209ENST00000566600 EFCAB6Q5THR3 1501 aa39.14■■■■□ 3.86
NME3-209ENST00000566600 TET3O43151 1660 aa39.14■■■■□ 3.86
NME3-209ENST00000566600 SPATA31D1Q6ZQQ2 1576 aa39.12■■■■□ 3.85
NME3-209ENST00000566600 ERVK-7P63135 1459 aa39.11■■■■□ 3.85
NME3-209ENST00000566600 MYO3AQ8NEV4 1616 aa39.1■■■■□ 3.85
NME3-209ENST00000566600 RPRD2Q5VT52 1461 aaKnown RBP39.09■■■■□ 3.85
NME3-209ENST00000566600 ACIN1Q9UKV3 1341 aaKnown RBP39.09■■■■□ 3.85
NME3-209ENST00000566600 SETD5Q9C0A6 1442 aa39.08■■■■□ 3.85
NME3-209ENST00000566600 CFAP65Q6ZU64 1925 aaKnown RBP39.04■■■■□ 3.84
NME3-209ENST00000566600 TRIM52Q96A61 297 aa39.04■■■■□ 3.84
NME3-209ENST00000566600 NLRP1Q9C000 1473 aa39.04■■■■□ 3.84
NME3-209ENST00000566600 ZNF142P52746 1687 aaPredicted RBP39.03■■■■□ 3.84
NME3-209ENST00000566600 CEP170BQ9Y4F5 1589 aaPredicted RBP39.01■■■■□ 3.84
NME3-209ENST00000566600 A2ML1A8K2U0 1454 aa39■■■■□ 3.83
NME3-209ENST00000566600 HSPA2P54652 639 aa38.99■■■■□ 3.83
NME3-209ENST00000566600 E9PCH4 1651 aa38.96■■■■□ 3.83
NME3-209ENST00000566600 NOS1P29475 1434 aa38.96■■■■□ 3.83
NME3-209ENST00000566600 RAB3GAP2Q9H2M9 1393 aa38.92■■■■□ 3.82
NME3-209ENST00000566600 SLC4A1APQ9BWU0 796 aaKnown RBP38.88■■■■□ 3.81
NME3-209ENST00000566600 SYNMO15061 1565 aa38.87■■■■□ 3.81
NME3-209ENST00000566600 SLC52A1Q9NWF4 448 aa38.86■■■■□ 3.81
NME3-209ENST00000566600 UGGT1Q9NYU2 1555 aa38.86■■■■□ 3.81
NME3-209ENST00000566600 HRCP23327 699 aa38.85■■■■□ 3.81
NME3-209ENST00000566600 TRIM26Q12899 539 aaPredicted RBP38.84■■■■□ 3.81
NME3-209ENST00000566600 THEMISQ8N1K5 641 aaPredicted RBP38.84■■■■□ 3.81
NME3-209ENST00000566600 PKD2Q13563 968 aa38.81■■■■□ 3.8
NME3-209ENST00000566600 PLA2R1Q13018 1463 aa38.8■■■■□ 3.8
NME3-209ENST00000566600 IDI1Q13907 227 aa38.79■■■■□ 3.8
NME3-209ENST00000566600 PIK3C2BO00750 1634 aa38.77■■■■□ 3.8
NME3-209ENST00000566600 PTPRTO14522 1441 aa38.76■■■■□ 3.8
NME3-209ENST00000566600 MPHOSPH9Q99550 1183 aa38.76■■■■□ 3.8
NME3-209ENST00000566600 STAG3Q9UJ98 1225 aa38.76■■■■□ 3.8
NME3-209ENST00000566600 SPHKAPQ2M3C7 1700 aa38.75■■■■□ 3.79
NME3-209ENST00000566600 UBR1Q8IWV7 1749 aa38.75■■■■□ 3.79
NME3-209ENST00000566600 KDM5AP29375 1690 aaKnown RBP38.74■■■■□ 3.79
NME3-209ENST00000566600 STRCQ7RTU9 1775 aa38.72■■■■□ 3.79
NME3-209ENST00000566600 DMRT2Q9Y5R5 561 aa38.71■■■■□ 3.79
NME3-209ENST00000566600 ADGRB3O60242 1522 aa38.68■■■■□ 3.78
NME3-209ENST00000566600 TRPM2O94759 1503 aa38.66■■■■□ 3.78
NME3-209ENST00000566600 ANKLE2Q86XL3 938 aa38.65■■■■□ 3.78
NME3-209ENST00000566600 NCKAP5LQ9HCH0 1330 aa38.63■■■■□ 3.77
NME3-209ENST00000566600 SLIT1O75093 1534 aa38.6■■■■□ 3.77
NME3-209ENST00000566600 POLR1AO95602 1720 aaPredicted RBP38.59■■■■□ 3.77
NME3-209ENST00000566600 ARHGAP23Q9P227 1491 aa38.59■■■■□ 3.77
NME3-209ENST00000566600 TMEM2Q9UHN6 1383 aa38.58■■■■□ 3.77
NME3-209ENST00000566600 FOXD1Q16676 465 aa38.58■■■■□ 3.77
NME3-209ENST00000566600 TMEM131LA2VDJ0 1609 aa38.58■■■■□ 3.77
NME3-209ENST00000566600 CHGAP10645 457 aaKnown RBP38.57■■■■□ 3.76
NME3-209ENST00000566600 EID1Q9Y6B2 187 aa38.55■■■■□ 3.76
NME3-209ENST00000566600 CLTCL1P53675 1640 aa38.53■■■■□ 3.76
NME3-209ENST00000566600 TXNDC2Q86VQ3 553 aa38.51■■■■□ 3.76
NME3-209ENST00000566600 SCAF11Q99590 1463 aaKnown RBP38.51■■■■□ 3.76
NME3-209ENST00000566600 MYO5BQ9ULV0 1848 aa38.49■■■■□ 3.75
NME3-209ENST00000566600 MED14O60244 1454 aa38.49■■■■□ 3.75
NME3-209ENST00000566600 HDGFP51858 240 aaKnown RBP38.49■■■■□ 3.75
NME3-209ENST00000566600 NEURL4Q96JN8 1562 aa38.48■■■■□ 3.75
NME3-209ENST00000566600 CCDC144AA2RUR9 1427 aa38.46■■■■□ 3.75
NME3-209ENST00000566600 KIF1BO60333 1816 aa38.46■■■■□ 3.75
NME3-209ENST00000566600 LTKP29376 864 aa38.45■■■■□ 3.75
NME3-209ENST00000566600 NPHP4O75161 1426 aaPredicted RBP38.45■■■■□ 3.75
NME3-209ENST00000566600 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.42■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms