RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZDHHC16Q969W1 377 aa6.28□□□□□ -1.4
HERPUD1-211ENST00000566550 JPH4Q96JJ6 628 aa6.28□□□□□ -1.4
HERPUD1-211ENST00000566550 LAPTM4AQ15012 233 aa6.27□□□□□ -1.41
HERPUD1-211ENST00000566550 NYAP1Q6ZVC0 841 aa6.27□□□□□ -1.41
HERPUD1-211ENST00000566550 ITGBL1O95965 494 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-211ENST00000566550 C14orf37Q86TY3 774 aa6.26□□□□□ -1.41
HERPUD1-211ENST00000566550 PDE4AP27815 886 aa6.25□□□□□ -1.41
HERPUD1-211ENST00000566550 PPP1R15BQ5SWA1 713 aa6.25□□□□□ -1.41
HERPUD1-211ENST00000566550 ERICH6Q7L0X2 663 aa6.25□□□□□ -1.41
HERPUD1-211ENST00000566550 ANO8Q9HCE9 1232 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-211ENST00000566550 RABGEF1Q9UJ41 708 aa6.25□□□□□ -1.41
HERPUD1-211ENST00000566550 EVI5O60447 810 aa6.24□□□□□ -1.41
HERPUD1-211ENST00000566550 KCNC4Q03721 635 aa6.24□□□□□ -1.41
HERPUD1-211ENST00000566550 TMEM132AQ24JP5 1023 aa6.24□□□□□ -1.41
HERPUD1-211ENST00000566550 HS6ST3Q8IZP7 471 aa6.24□□□□□ -1.41
HERPUD1-211ENST00000566550 MAP3K9P80192 1104 aa6.23□□□□□ -1.41
HERPUD1-211ENST00000566550 LAPTM4BQ86VI4 370 aa6.23□□□□□ -1.41
HERPUD1-211ENST00000566550 PPP1R3GB7ZBB8 358 aa6.22□□□□□ -1.41
HERPUD1-211ENST00000566550 CHGAP10645 457 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-211ENST00000566550 ADAM33Q9BZ11 813 aa6.22□□□□□ -1.41
HERPUD1-211ENST00000566550 CRISPLD2Q9H0B8 497 aa6.21□□□□□ -1.42
HERPUD1-211ENST00000566550 SOWAHBA6NEL2 793 aa6.2□□□□□ -1.42
HERPUD1-211ENST00000566550 FBXW7Q969H0 707 aa6.19□□□□□ -1.42
HERPUD1-211ENST00000566550 ONECUT3O60422 494 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-211ENST00000566550 BCAMP50895 628 aa6.18□□□□□ -1.42
HERPUD1-211ENST00000566550 TRAF7Q6Q0C0 670 aa6.18□□□□□ -1.42
HERPUD1-211ENST00000566550 ZFRQ96KR1 1074 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-211ENST00000566550 GFRA3O60609 400 aa6.16□□□□□ -1.42
HERPUD1-211ENST00000566550 PROX2Q3B8N5 592 aa6.16□□□□□ -1.42
HERPUD1-211ENST00000566550 TYW1BQ6NUM6 668 aa6.16□□□□□ -1.42
HERPUD1-211ENST00000566550 DDX27Q96GQ7 796 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-211ENST00000566550 KIAA1468Q9P260 1216 aa6.16□□□□□ -1.42
HERPUD1-211ENST00000566550 LARP6Q9BRS8 491 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-211ENST00000566550 WBP1LQ9NX94 342 aa6.15□□□□□ -1.42
HERPUD1-211ENST00000566550 TSR3Q9UJK0 312 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-211ENST00000566550 PHF14O94880 888 aa6.14□□□□□ -1.43
HERPUD1-211ENST00000566550 LRCH3Q96II8 777 aa6.14□□□□□ -1.43
HERPUD1-211ENST00000566550 DNAJC5Q9H3Z4 198 aa6.14□□□□□ -1.43
HERPUD1-211ENST00000566550 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.14□□□□□ -1.43
HERPUD1-211ENST00000566550 PCDHGA10Q9Y5H3 936 aa6.14□□□□□ -1.43
HERPUD1-211ENST00000566550 FAM98CQ17RN3 349 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-211ENST00000566550 COL9A1P20849 921 aa6.12□□□□□ -1.43
HERPUD1-211ENST00000566550 EPAS1Q99814 870 aa6.12□□□□□ -1.43
HERPUD1-211ENST00000566550 NCKAP5LQ9HCH0 1330 aa6.12□□□□□ -1.43
HERPUD1-211ENST00000566550 HPS5Q9UPZ3 1129 aa6.12□□□□□ -1.43
HERPUD1-211ENST00000566550 SUPT5HO00267 1087 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-211ENST00000566550 NRG2O14511 850 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-211ENST00000566550 RANGAP1P46060 587 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-211ENST00000566550 PPP4CP60510 307 aa6.1□□□□□ -1.43
HERPUD1-211ENST00000566550 SEPT9Q9UHD8 586 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-211ENST00000566550 TRIM6-TRIM34B2RNG4 842 aa6.09□□□□□ -1.43
HERPUD1-211ENST00000566550 C6orf132Q5T0Z8 1188 aa6.09□□□□□ -1.43
HERPUD1-211ENST00000566550 PACS2Q86VP3 889 aa6.09□□□□□ -1.43
HERPUD1-211ENST00000566550 PODXL2Q9NZ53 605 aa6.09□□□□□ -1.43
HERPUD1-211ENST00000566550 MFSD10Q14728 455 aa6.08□□□□□ -1.44
HERPUD1-211ENST00000566550 NKX1-1Q15270 411 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-211ENST00000566550 ZNF787Q6DD87 383 aa6.08□□□□□ -1.44
HERPUD1-211ENST00000566550 PRKD2Q9BZL6 878 aa6.08□□□□□ -1.44
HERPUD1-211ENST00000566550 V9GY48 417 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-211ENST00000566550 HDGFP51858 240 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-211ENST00000566550 GGCXP38435 758 aa6.05□□□□□ -1.44
HERPUD1-211ENST00000566550 IL21Q9HBE4 155 aa6.05□□□□□ -1.44
HERPUD1-211ENST00000566550 EMILIN3Q9NT22 766 aa6.05□□□□□ -1.44
HERPUD1-211ENST00000566550 RBM33Q96EV2 1170 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-211ENST00000566550 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-211ENST00000566550 PDZRN3Q9UPQ7 1066 aa6.03□□□□□ -1.44
HERPUD1-211ENST00000566550 TJAP1Q5JTD0 557 aa6.02□□□□□ -1.45
HERPUD1-211ENST00000566550 PPP1R18Q6NYC8 613 aa6.02□□□□□ -1.45
HERPUD1-211ENST00000566550 NECTIN2Q92692 538 aa6.02□□□□□ -1.45
HERPUD1-211ENST00000566550 GTPBP6O43824 516 aaPredicted RBP6.01□□□□□ -1.45
HERPUD1-211ENST00000566550 LCE2BO14633 110 aa6□□□□□ -1.45
HERPUD1-211ENST00000566550 MAP3K7O43318 606 aa6□□□□□ -1.45
HERPUD1-211ENST00000566550 MTRQ99707 1265 aa6□□□□□ -1.45
HERPUD1-211ENST00000566550 SLC4A3P48751 1232 aa5.99□□□□□ -1.45
HERPUD1-211ENST00000566550 SAMD7Q7Z3H4 446 aa5.99□□□□□ -1.45
HERPUD1-211ENST00000566550 CERKQ8TCT0 537 aa5.99□□□□□ -1.45
HERPUD1-211ENST00000566550 NBPF26B4DH59 902 aa5.98□□□□□ -1.45
HERPUD1-211ENST00000566550 DPYSL4O14531 572 aa5.98□□□□□ -1.45
HERPUD1-211ENST00000566550 DDX12PQ92771 950 aa5.98□□□□□ -1.45
HERPUD1-211ENST00000566550 RNF40O75150 1001 aa5.97□□□□□ -1.45
HERPUD1-211ENST00000566550 BRPF1P55201 1214 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-211ENST00000566550 EN1Q05925 392 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-211ENST00000566550 LMOD2Q6P5Q4 547 aa5.97□□□□□ -1.45
HERPUD1-211ENST00000566550 ZNF775Q96BV0 537 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-211ENST00000566550 TMUB1Q9BVT8 246 aa5.97□□□□□ -1.45
HERPUD1-211ENST00000566550 TSKSQ9UJT2 592 aa5.97□□□□□ -1.45
HERPUD1-211ENST00000566550 CAMK2BQ13554 666 aa5.96□□□□□ -1.46
HERPUD1-211ENST00000566550 NEUROD2Q15784 382 aa5.96□□□□□ -1.46
HERPUD1-211ENST00000566550 PRSS12P56730 875 aa5.95□□□□□ -1.46
HERPUD1-211ENST00000566550 CDCA7LQ96GN5 454 aa5.95□□□□□ -1.46
HERPUD1-211ENST00000566550 PNMA3Q9UL41 463 aa5.95□□□□□ -1.46
HERPUD1-211ENST00000566550 SPDYE16A6NNV3 312 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-211ENST00000566550 PKDCCQ504Y2 493 aa5.94□□□□□ -1.46
HERPUD1-211ENST00000566550 P3H3Q8IVL6 736 aa5.94□□□□□ -1.46
HERPUD1-211ENST00000566550 ZNF516Q92618 1163 aa5.94□□□□□ -1.46
HERPUD1-211ENST00000566550 TATDN2Q93075 761 aa5.94□□□□□ -1.46
HERPUD1-211ENST00000566550 SMAPO00193 183 aa5.93□□□□□ -1.46
HERPUD1-211ENST00000566550 UBTFP17480 764 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-211ENST00000566550 DGAT1O75907 488 aa5.92□□□□□ -1.46
HERPUD1-211ENST00000566550 TSR1Q2NL82 804 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms