RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SPATA31D1Q6ZQQ2 1576 aa10.65□□□□□ -0.71
UBFD1-204ENST00000565634 RAPGEF3O95398 923 aa10.64□□□□□ -0.71
UBFD1-204ENST00000565634 CD109Q6YHK3 1445 aa10.64□□□□□ -0.71
UBFD1-204ENST00000565634 MADDQ8WXG6 1647 aa10.63□□□□□ -0.71
UBFD1-204ENST00000565634 DPY19L2Q6NUT2 758 aa10.63□□□□□ -0.71
UBFD1-204ENST00000565634 CABP2Q9NPB3 220 aa10.63□□□□□ -0.71
UBFD1-204ENST00000565634 IGF1RP08069 1367 aa10.63□□□□□ -0.71
UBFD1-204ENST00000565634 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
UBFD1-204ENST00000565634 CARMIL2Q6F5E8 1435 aa10.61□□□□□ -0.71
UBFD1-204ENST00000565634 L3MBTL3Q96JM7 780 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-204ENST00000565634 KDM5BQ9UGL1 1544 aa10.6□□□□□ -0.71
UBFD1-204ENST00000565634 UHRF1BP1LA0JNW5 1464 aa10.6□□□□□ -0.71
UBFD1-204ENST00000565634 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
UBFD1-204ENST00000565634 MLECQ14165 292 aa10.59□□□□□ -0.71
UBFD1-204ENST00000565634 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
UBFD1-204ENST00000565634 WDR7Q9Y4E6 1490 aa10.56□□□□□ -0.72
UBFD1-204ENST00000565634 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
UBFD1-204ENST00000565634 DISP1Q96F81 1524 aa10.56□□□□□ -0.72
UBFD1-204ENST00000565634 CFAP43Q8NDM7 1665 aa10.56□□□□□ -0.72
UBFD1-204ENST00000565634 CARMIL1Q5VZK9 1371 aa10.54□□□□□ -0.72
UBFD1-204ENST00000565634 MAGI3Q5TCQ9 1506 aa10.54□□□□□ -0.72
UBFD1-204ENST00000565634 SNPHO15079 494 aa10.54□□□□□ -0.72
UBFD1-204ENST00000565634 CEBPAP49715 358 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-204ENST00000565634 IQGAP2Q13576 1575 aa10.53□□□□□ -0.72
UBFD1-204ENST00000565634 RNF25Q96BH1 459 aaPredicted RBP10.53□□□□□ -0.72
UBFD1-204ENST00000565634 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
UBFD1-204ENST00000565634 TMEM121BQ9BXQ6 578 aaPredicted RBP10.51□□□□□ -0.73
UBFD1-204ENST00000565634 STRCQ7RTU9 1775 aa10.51□□□□□ -0.73
UBFD1-204ENST00000565634 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
UBFD1-204ENST00000565634 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
UBFD1-204ENST00000565634 ARAP3Q8WWN8 1544 aa10.49□□□□□ -0.73
UBFD1-204ENST00000565634 SIGLEC1Q9BZZ2 1709 aa10.48□□□□□ -0.73
UBFD1-204ENST00000565634 RIOK3O14730 519 aaKnown RBP10.48□□□□□ -0.73
UBFD1-204ENST00000565634 KIF27Q86VH2 1401 aa10.48□□□□□ -0.73
UBFD1-204ENST00000565634 P3H3Q8IVL6 736 aa10.47□□□□□ -0.73
UBFD1-204ENST00000565634 KIAA0556O60303 1618 aa10.45□□□□□ -0.74
UBFD1-204ENST00000565634 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-204ENST00000565634 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-204ENST00000565634 FRMPD1Q5SYB0 1578 aa10.43□□□□□ -0.74
UBFD1-204ENST00000565634 FER1L4A9Z1Z3 1794 aa10.43□□□□□ -0.74
UBFD1-204ENST00000565634 G3V3G9 751 aa10.42□□□□□ -0.74
UBFD1-204ENST00000565634 HOXB3P14651 431 aaPredicted RBP10.42□□□□□ -0.74
UBFD1-204ENST00000565634 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
UBFD1-204ENST00000565634 UBAP1LF5GYI3 381 aa10.41□□□□□ -0.74
UBFD1-204ENST00000565634 VGFO15240 615 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-204ENST00000565634 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
UBFD1-204ENST00000565634 MS4A4AQ96JQ5 239 aa10.41□□□□□ -0.74
UBFD1-204ENST00000565634 UGGT2Q9NYU1 1516 aa10.41□□□□□ -0.74
UBFD1-204ENST00000565634 SETD1BQ9UPS6 1966 aaKnown RBP10.41□□□□□ -0.74
UBFD1-204ENST00000565634 YEATS2Q9ULM3 1422 aa10.41□□□□□ -0.74
UBFD1-204ENST00000565634 ABCA8O94911 1581 aa10.39□□□□□ -0.75
UBFD1-204ENST00000565634 SOX12O15370 315 aa10.39□□□□□ -0.75
UBFD1-204ENST00000565634 ATP10BO94823 1461 aa10.38□□□□□ -0.75
UBFD1-204ENST00000565634 EMP3P54852 163 aa10.38□□□□□ -0.75
UBFD1-204ENST00000565634 PHF8Q9UPP1 1060 aa10.38□□□□□ -0.75
UBFD1-204ENST00000565634 PREX1Q8TCU6 1659 aa10.38□□□□□ -0.75
UBFD1-204ENST00000565634 LTBP4Q8N2S1 1624 aa10.37□□□□□ -0.75
UBFD1-204ENST00000565634 TMEM92Q6UXU6 159 aa10.37□□□□□ -0.75
UBFD1-204ENST00000565634 ABCA9Q8IUA7 1624 aa10.36□□□□□ -0.75
UBFD1-204ENST00000565634 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
UBFD1-204ENST00000565634 HSPA1LP34931 641 aa10.36□□□□□ -0.75
UBFD1-204ENST00000565634 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
UBFD1-204ENST00000565634 MICALL2Q8IY33 904 aa10.36□□□□□ -0.75
UBFD1-204ENST00000565634 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
UBFD1-204ENST00000565634 POGZQ7Z3K3 1410 aa10.33□□□□□ -0.76
UBFD1-204ENST00000565634 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
UBFD1-204ENST00000565634 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
UBFD1-204ENST00000565634 RANGAP1P46060 587 aaPredicted RBP10.33□□□□□ -0.76
UBFD1-204ENST00000565634 SPNS2Q8IVW8 549 aa10.33□□□□□ -0.76
UBFD1-204ENST00000565634 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
UBFD1-204ENST00000565634 PHLDB1Q86UU1 1377 aa10.33□□□□□ -0.76
UBFD1-204ENST00000565634 DENND4BO75064 1496 aaPredicted RBP10.33□□□□□ -0.76
UBFD1-204ENST00000565634 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
UBFD1-204ENST00000565634 MED1Q15648 1581 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-204ENST00000565634 FANCAO15360 1455 aa10.32□□□□□ -0.76
UBFD1-204ENST00000565634 NEO1Q92859 1461 aa10.32□□□□□ -0.76
UBFD1-204ENST00000565634 RAPGEF2Q9Y4G8 1499 aa10.32□□□□□ -0.76
UBFD1-204ENST00000565634 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-204ENST00000565634 AKNAQ7Z591 1439 aa10.31□□□□□ -0.76
UBFD1-204ENST00000565634 CTTNBP2Q8WZ74 1663 aa10.31□□□□□ -0.76
UBFD1-204ENST00000565634 TTC37Q6PGP7 1564 aa10.31□□□□□ -0.76
UBFD1-204ENST00000565634 FBXO22Q8NEZ5 403 aa10.3□□□□□ -0.76
UBFD1-204ENST00000565634 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
UBFD1-204ENST00000565634 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
UBFD1-204ENST00000565634 HOXB1P14653 301 aaPredicted RBP10.29□□□□□ -0.76
UBFD1-204ENST00000565634 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
UBFD1-204ENST00000565634 PKD2Q13563 968 aa10.29□□□□□ -0.76
UBFD1-204ENST00000565634 PTPRTO14522 1441 aa10.29□□□□□ -0.76
UBFD1-204ENST00000565634 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
UBFD1-204ENST00000565634 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
UBFD1-204ENST00000565634 ECM2O94769 699 aaPredicted RBP10.28□□□□□ -0.76
UBFD1-204ENST00000565634 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
UBFD1-204ENST00000565634 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
UBFD1-204ENST00000565634 STK24Q9Y6E0 443 aa10.28□□□□□ -0.76
UBFD1-204ENST00000565634 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
UBFD1-204ENST00000565634 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
UBFD1-204ENST00000565634 NLRP6P59044 892 aa10.26□□□□□ -0.77
UBFD1-204ENST00000565634 MFRPQ9BY79 579 aa10.26□□□□□ -0.77
UBFD1-204ENST00000565634 C3P01024 1663 aa10.25□□□□□ -0.77
UBFD1-204ENST00000565634 RGL2O15211 777 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms