RNA–Protein interactions for RNA: ENST00000565401.1

AC009041.1-201, humanhuman

TSL 4 BASIC

Gene AC009041.1, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-201ENST00000565401 PREX2Q70Z35 1606 aa21.63■■□□□ 1.05
AC009041.1-201ENST00000565401 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
AC009041.1-201ENST00000565401 FAM135AQ9P2D6 1515 aa21.61■■□□□ 1.05
AC009041.1-201ENST00000565401 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
AC009041.1-201ENST00000565401 ZNF772Q68DY9 489 aaPredicted RBP21.59■■□□□ 1.05
AC009041.1-201ENST00000565401 ZNF777Q9ULD5 760 aaPredicted RBP21.59■■□□□ 1.05
AC009041.1-201ENST00000565401 ATP7AQ04656 1500 aa21.58■■□□□ 1.04
AC009041.1-201ENST00000565401 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.04
AC009041.1-201ENST00000565401 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
AC009041.1-201ENST00000565401 RXRBP28702 533 aa21.55■■□□□ 1.04
AC009041.1-201ENST00000565401 JCADQ9P266 1359 aa21.55■■□□□ 1.04
AC009041.1-201ENST00000565401 NLRP1Q9C000 1473 aa21.55■■□□□ 1.04
AC009041.1-201ENST00000565401 ROBO1Q9Y6N7 1651 aa21.55■■□□□ 1.04
AC009041.1-201ENST00000565401 PZPP20742 1482 aa21.54■■□□□ 1.04
AC009041.1-201ENST00000565401 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
AC009041.1-201ENST00000565401 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
AC009041.1-201ENST00000565401 SYCP2Q9BX26 1530 aa21.53■■□□□ 1.04
AC009041.1-201ENST00000565401 FMN1Q68DA7 1419 aa21.52■■□□□ 1.04
AC009041.1-201ENST00000565401 INO80Q9ULG1 1556 aaPredicted RBP21.49■■□□□ 1.03
AC009041.1-201ENST00000565401 ZC3H13Q5T200 1668 aaKnown RBP21.47■■□□□ 1.03
AC009041.1-201ENST00000565401 KDM5DQ9BY66 1539 aa21.47■■□□□ 1.03
AC009041.1-201ENST00000565401 LRP6O75581 1613 aa21.47■■□□□ 1.03
AC009041.1-201ENST00000565401 CDC42BPAQ5VT25 1732 aa21.46■■□□□ 1.03
AC009041.1-201ENST00000565401 ZRANB1Q9UGI0 708 aa21.46■■□□□ 1.03
AC009041.1-201ENST00000565401 CDK12Q9NYV4 1490 aaPredicted RBP21.45■■□□□ 1.03
AC009041.1-201ENST00000565401 TMEM94Q12767 1356 aa21.45■■□□□ 1.02
AC009041.1-201ENST00000565401 PHLPP1O60346 1717 aa21.43■■□□□ 1.02
AC009041.1-201ENST00000565401 WASHC2CQ9Y4E1 1318 aa21.43■■□□□ 1.02
AC009041.1-201ENST00000565401 SPATA31A6Q5VVP1 1343 aa21.42■■□□□ 1.02
AC009041.1-201ENST00000565401 ADGBQ8N7X0 1667 aa21.42■■□□□ 1.02
AC009041.1-201ENST00000565401 LRRC9Q6ZRR7 1453 aa21.41■■□□□ 1.02
AC009041.1-201ENST00000565401 FOXD1Q16676 465 aa21.41■■□□□ 1.02
AC009041.1-201ENST00000565401 KIF3BO15066 747 aa21.39■■□□□ 1.01
AC009041.1-201ENST00000565401 SETBP1Q9Y6X0 1596 aa21.39■■□□□ 1.01
AC009041.1-201ENST00000565401 SCAF11Q99590 1463 aaKnown RBP21.39■■□□□ 1.01
AC009041.1-201ENST00000565401 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
AC009041.1-201ENST00000565401 LRRIQ1Q96JM4 1722 aa21.38■■□□□ 1.01
AC009041.1-201ENST00000565401 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
AC009041.1-201ENST00000565401 LTKP29376 864 aa21.36■■□□□ 1.01
AC009041.1-201ENST00000565401 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
AC009041.1-201ENST00000565401 NUTM2BA6NNL0 878 aaPredicted RBP21.35■■□□□ 1.01
AC009041.1-201ENST00000565401 NUTM2EB1AL46 878 aaPredicted RBP21.35■■□□□ 1.01
AC009041.1-201ENST00000565401 NUTM2DQ5VT03 806 aaPredicted RBP21.35■■□□□ 1.01
AC009041.1-201ENST00000565401 TXNDC2Q86VQ3 553 aa21.35■■□□□ 1.01
AC009041.1-201ENST00000565401 NUTM2AQ8IVF1 878 aaPredicted RBP21.35■■□□□ 1.01
AC009041.1-201ENST00000565401 SLAIN2Q9P270 581 aa21.35■■□□□ 1.01
AC009041.1-201ENST00000565401 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
AC009041.1-201ENST00000565401 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
AC009041.1-201ENST00000565401 PROSER2Q86WR7 435 aaPredicted RBP21.34■■□□□ 1.01
AC009041.1-201ENST00000565401 MAP3K1Q13233 1512 aa21.33■■□□□ 1
AC009041.1-201ENST00000565401 GPATCH8Q9UKJ3 1502 aaKnown RBP21.33■■□□□ 1
AC009041.1-201ENST00000565401 RGS12O14924 1447 aa21.32■■□□□ 1
AC009041.1-201ENST00000565401 COL16A1Q07092 1604 aaPredicted RBP21.32■■□□□ 1
AC009041.1-201ENST00000565401 FGD6Q6ZV73 1430 aa21.31■■□□□ 1
AC009041.1-201ENST00000565401 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
AC009041.1-201ENST00000565401 ARHGAP35Q9NRY4 1499 aa21.29■■□□□ 1
AC009041.1-201ENST00000565401 KCNA6P17658 529 aa21.29■■□□□ 1
AC009041.1-201ENST00000565401 AFF2P51816 1311 aa21.29■■□□□ 1
AC009041.1-201ENST00000565401 MSH6P52701 1360 aa21.27■■□□□ 1
AC009041.1-201ENST00000565401 EID1Q9Y6B2 187 aa21.26■□□□□ 0.99
AC009041.1-201ENST00000565401 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
AC009041.1-201ENST00000565401 ATAD2Q6PL18 1390 aa21.24■□□□□ 0.99
AC009041.1-201ENST00000565401 UBR1Q8IWV7 1749 aa21.24■□□□□ 0.99
AC009041.1-201ENST00000565401 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
AC009041.1-201ENST00000565401 NCOA2Q15596 1464 aa21.23■□□□□ 0.99
AC009041.1-201ENST00000565401 CCDC18Q5T9S5 1454 aa21.23■□□□□ 0.99
AC009041.1-201ENST00000565401 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
AC009041.1-201ENST00000565401 QTRT2Q9H974 415 aaKnown RBP21.22■□□□□ 0.99
AC009041.1-201ENST00000565401 SLIT1O75093 1534 aa21.22■□□□□ 0.99
AC009041.1-201ENST00000565401 PRDM15P57071 1507 aaPredicted RBP21.22■□□□□ 0.99
AC009041.1-201ENST00000565401 ERVK-7P63135 1459 aa21.2■□□□□ 0.98
AC009041.1-201ENST00000565401 SHPRHQ149N8 1683 aa21.2■□□□□ 0.98
AC009041.1-201ENST00000565401 EEA1Q15075 1411 aa21.2■□□□□ 0.98
AC009041.1-201ENST00000565401 TIAM1Q13009 1591 aa21.19■□□□□ 0.98
AC009041.1-201ENST00000565401 ZNF644Q9H582 1327 aaPredicted RBP21.19■□□□□ 0.98
AC009041.1-201ENST00000565401 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
AC009041.1-201ENST00000565401 SLC26A8Q96RN1 970 aa21.17■□□□□ 0.98
AC009041.1-201ENST00000565401 CCNB3Q8WWL7 1395 aa21.17■□□□□ 0.98
AC009041.1-201ENST00000565401 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
AC009041.1-201ENST00000565401 MBD5Q9P267 1494 aa21.15■□□□□ 0.98
AC009041.1-201ENST00000565401 NKTRP30414 1462 aaKnown RBP21.14■□□□□ 0.98
AC009041.1-201ENST00000565401 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
AC009041.1-201ENST00000565401 NGLY1Q96IV0 654 aa21.13■□□□□ 0.97
AC009041.1-201ENST00000565401 C8orf37Q96NL8 207 aa21.13■□□□□ 0.97
AC009041.1-201ENST00000565401 ABCC3O15438 1527 aa21.13■□□□□ 0.97
AC009041.1-201ENST00000565401 EP400Q96L91 3159 aa21.11■□□□□ 0.97
AC009041.1-201ENST00000565401 AHDC1Q5TGY3 1603 aaPredicted RBP21.11■□□□□ 0.97
AC009041.1-201ENST00000565401 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
AC009041.1-201ENST00000565401 CFAP65Q6ZU64 1925 aaKnown RBP21.1■□□□□ 0.97
AC009041.1-201ENST00000565401 CCDC125Q86Z20 511 aa21.08■□□□□ 0.97
AC009041.1-201ENST00000565401 NWD1Q149M9 1564 aa21.07■□□□□ 0.96
AC009041.1-201ENST00000565401 KDM5AP29375 1690 aaKnown RBP21.06■□□□□ 0.96
AC009041.1-201ENST00000565401 LRP5O75197 1615 aa21.05■□□□□ 0.96
AC009041.1-201ENST00000565401 STAG3Q9UJ98 1225 aa21.05■□□□□ 0.96
AC009041.1-201ENST00000565401 DIP2AQ14689 1571 aa21.05■□□□□ 0.96
AC009041.1-201ENST00000565401 TET3O43151 1660 aa21.05■□□□□ 0.96
AC009041.1-201ENST00000565401 IFFO2Q5TF58 517 aa21.03■□□□□ 0.96
AC009041.1-201ENST00000565401 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
AC009041.1-201ENST00000565401 BCANQ96GW7 911 aa21.01■□□□□ 0.95
AC009041.1-201ENST00000565401 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms