RNA–Protein interactions for RNA: ENST00000565256.1

SNHG20-203, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 1,234 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-203ENST00000565256 ZNF518AQ6AHZ1 1483 aa19.7■□□□□ 0.74
SNHG20-203ENST00000565256 KIF15Q9NS87 1388 aa19.7■□□□□ 0.74
SNHG20-203ENST00000565256 ATP10AO60312 1499 aa19.69■□□□□ 0.74
SNHG20-203ENST00000565256 SPATA31D1Q6ZQQ2 1576 aa19.69■□□□□ 0.74
SNHG20-203ENST00000565256 KDM5CP41229 1560 aa19.68■□□□□ 0.74
SNHG20-203ENST00000565256 INO80Q9ULG1 1556 aaPredicted RBP19.68■□□□□ 0.74
SNHG20-203ENST00000565256 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
SNHG20-203ENST00000565256 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
SNHG20-203ENST00000565256 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
SNHG20-203ENST00000565256 KIDINS220Q9ULH0 1771 aa19.65■□□□□ 0.74
SNHG20-203ENST00000565256 ACIN1Q9UKV3 1341 aaKnown RBP19.64■□□□□ 0.73
SNHG20-203ENST00000565256 DUOX2Q9NRD8 1548 aa19.63■□□□□ 0.73
SNHG20-203ENST00000565256 MLH3Q9UHC1 1453 aa19.63■□□□□ 0.73
SNHG20-203ENST00000565256 UHRF1BP1Q6BDS2 1440 aa19.62■□□□□ 0.73
SNHG20-203ENST00000565256 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
SNHG20-203ENST00000565256 LTBP4Q8N2S1 1624 aa19.62■□□□□ 0.73
SNHG20-203ENST00000565256 MYT1LQ9UL68 1186 aa19.61■□□□□ 0.73
SNHG20-203ENST00000565256 PTPRTO14522 1441 aa19.6■□□□□ 0.73
SNHG20-203ENST00000565256 TRIM52Q96A61 297 aa19.6■□□□□ 0.73
SNHG20-203ENST00000565256 ERBINQ96RT1 1412 aa19.57■□□□□ 0.72
SNHG20-203ENST00000565256 DIP2CQ9Y2E4 1556 aa19.56■□□□□ 0.72
SNHG20-203ENST00000565256 DHX29Q7Z478 1369 aaKnown RBP19.55■□□□□ 0.72
SNHG20-203ENST00000565256 ABCA6Q8N139 1617 aa19.54■□□□□ 0.72
SNHG20-203ENST00000565256 CLSPNQ9HAW4 1339 aa19.54■□□□□ 0.72
SNHG20-203ENST00000565256 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
SNHG20-203ENST00000565256 C3P01024 1663 aa19.53■□□□□ 0.72
SNHG20-203ENST00000565256 MPHOSPH9Q99550 1183 aa19.53■□□□□ 0.72
SNHG20-203ENST00000565256 ZEB1P37275 1124 aaPredicted RBP19.52■□□□□ 0.72
SNHG20-203ENST00000565256 PZPP20742 1482 aa19.52■□□□□ 0.72
SNHG20-203ENST00000565256 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.72
SNHG20-203ENST00000565256 UNC13BO14795 1591 aa19.52■□□□□ 0.71
SNHG20-203ENST00000565256 A2MP01023 1474 aa19.51■□□□□ 0.71
SNHG20-203ENST00000565256 NUP155O75694 1391 aa19.5■□□□□ 0.71
SNHG20-203ENST00000565256 EIF2AK4Q9P2K8 1649 aaKnown RBP19.5■□□□□ 0.71
SNHG20-203ENST00000565256 KDM5DQ9BY66 1539 aa19.5■□□□□ 0.71
SNHG20-203ENST00000565256 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
SNHG20-203ENST00000565256 AGLP35573 1532 aa19.47■□□□□ 0.71
SNHG20-203ENST00000565256 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
SNHG20-203ENST00000565256 DEPDC5O75140 1603 aa19.47■□□□□ 0.71
SNHG20-203ENST00000565256 KIF3BO15066 747 aa19.46■□□□□ 0.71
SNHG20-203ENST00000565256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.46■□□□□ 0.712e-7■■□□□ 13.1
SNHG20-203ENST00000565256 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
SNHG20-203ENST00000565256 FAM135AQ9P2D6 1515 aa19.43■□□□□ 0.7
SNHG20-203ENST00000565256 MROH1Q8NDA8 1641 aa19.41■□□□□ 0.7
SNHG20-203ENST00000565256 RNF17Q9BXT8 1623 aaKnown RBP19.41■□□□□ 0.7
SNHG20-203ENST00000565256 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
SNHG20-203ENST00000565256 PKD2Q13563 968 aa19.4■□□□□ 0.7
SNHG20-203ENST00000565256 FOXD1Q16676 465 aa19.4■□□□□ 0.7
SNHG20-203ENST00000565256 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
SNHG20-203ENST00000565256 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
SNHG20-203ENST00000565256 PRDM15P57071 1507 aaPredicted RBP19.38■□□□□ 0.69
SNHG20-203ENST00000565256 ZNF335Q9H4Z2 1342 aaPredicted RBP19.38■□□□□ 0.69
SNHG20-203ENST00000565256 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
SNHG20-203ENST00000565256 KANK1Q14678 1352 aa19.37■□□□□ 0.69
SNHG20-203ENST00000565256 ANKRD30BQ9BXX2 1392 aa19.37■□□□□ 0.69
SNHG20-203ENST00000565256 NPATQ14207 1427 aa19.36■□□□□ 0.69
SNHG20-203ENST00000565256 NCKAP5LQ9HCH0 1330 aa19.34■□□□□ 0.69
SNHG20-203ENST00000565256 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
SNHG20-203ENST00000565256 GGT6Q6P531 493 aa19.34■□□□□ 0.69
SNHG20-203ENST00000565256 UBAP1LF5GYI3 381 aa19.33■□□□□ 0.68
SNHG20-203ENST00000565256 ESF1Q9H501 851 aaKnown RBP19.33■□□□□ 0.68
SNHG20-203ENST00000565256 MROH2AA6NES4 1674 aa19.33■□□□□ 0.68
SNHG20-203ENST00000565256 TET3O43151 1660 aa19.33■□□□□ 0.68
SNHG20-203ENST00000565256 CEP152O94986 1710 aa19.31■□□□□ 0.68
SNHG20-203ENST00000565256 ZMYM3Q14202 1370 aa19.3■□□□□ 0.68
SNHG20-203ENST00000565256 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
SNHG20-203ENST00000565256 E9PCH4 1651 aa19.3■□□□□ 0.68
SNHG20-203ENST00000565256 PLA2R1Q13018 1463 aa19.29■□□□□ 0.68
SNHG20-203ENST00000565256 ZNF142P52746 1687 aaPredicted RBP19.28■□□□□ 0.68
SNHG20-203ENST00000565256 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
SNHG20-203ENST00000565256 ABCC3O15438 1527 aa19.26■□□□□ 0.67
SNHG20-203ENST00000565256 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
SNHG20-203ENST00000565256 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
SNHG20-203ENST00000565256 MED1Q15648 1581 aaPredicted RBP19.25■□□□□ 0.67
SNHG20-203ENST00000565256 CEP170BQ9Y4F5 1589 aaPredicted RBP19.25■□□□□ 0.67
SNHG20-203ENST00000565256 RPRD2Q5VT52 1461 aaKnown RBP19.25■□□□□ 0.67
SNHG20-203ENST00000565256 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
SNHG20-203ENST00000565256 ZC3H13Q5T200 1668 aaKnown RBP19.24■□□□□ 0.67
SNHG20-203ENST00000565256 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
SNHG20-203ENST00000565256 CLTCQ00610 1675 aaKnown RBP19.22■□□□□ 0.67
SNHG20-203ENST00000565256 HSPA1LP34931 641 aa19.21■□□□□ 0.67
SNHG20-203ENST00000565256 SPHKAPQ2M3C7 1700 aa19.21■□□□□ 0.67
SNHG20-203ENST00000565256 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
SNHG20-203ENST00000565256 CFAP65Q6ZU64 1925 aaKnown RBP19.18■□□□□ 0.66
SNHG20-203ENST00000565256 TRPM2O94759 1503 aa19.17■□□□□ 0.66
SNHG20-203ENST00000565256 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
SNHG20-203ENST00000565256 ARHGAP31Q2M1Z3 1444 aa19.17■□□□□ 0.66
SNHG20-203ENST00000565256 PPP1R15AO75807 674 aaPredicted RBP19.15■□□□□ 0.66
SNHG20-203ENST00000565256 NEURL4Q96JN8 1562 aa19.15■□□□□ 0.66
SNHG20-203ENST00000565256 L3MBTL2Q969R5 705 aa19.14■□□□□ 0.65
SNHG20-203ENST00000565256 A2ML1A8K2U0 1454 aa19.13■□□□□ 0.65
SNHG20-203ENST00000565256 ALKQ9UM73 1620 aa19.13■□□□□ 0.65
SNHG20-203ENST00000565256 CLTCL1P53675 1640 aa19.12■□□□□ 0.65
SNHG20-203ENST00000565256 PIP4K2BP78356 416 aa19.12■□□□□ 0.65
SNHG20-203ENST00000565256 CPS1P31327 1500 aa19.1■□□□□ 0.65
SNHG20-203ENST00000565256 NOS1P29475 1434 aa19.1■□□□□ 0.65
SNHG20-203ENST00000565256 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
SNHG20-203ENST00000565256 UGGT1Q9NYU2 1555 aa19.07■□□□□ 0.64
SNHG20-203ENST00000565256 TOM1O60784 492 aa19.07■□□□□ 0.64
SNHG20-203ENST00000565256 SYNMO15061 1565 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms