RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 PLA2R1Q13018 1463 aa24.55■■□□□ 1.52
THUMPD1-203ENST00000565248 ZNF142P52746 1687 aaPredicted RBP24.55■■□□□ 1.52
THUMPD1-203ENST00000565248 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
THUMPD1-203ENST00000565248 ATP7AQ04656 1500 aa24.54■■□□□ 1.52
THUMPD1-203ENST00000565248 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
THUMPD1-203ENST00000565248 GGT6Q6P531 493 aa24.52■■□□□ 1.52
THUMPD1-203ENST00000565248 A2MP01023 1474 aa24.51■■□□□ 1.51
THUMPD1-203ENST00000565248 CEP170BQ9Y4F5 1589 aaPredicted RBP24.51■■□□□ 1.51
THUMPD1-203ENST00000565248 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
THUMPD1-203ENST00000565248 KIAA1107Q9UPP5 1409 aa24.51■■□□□ 1.51
THUMPD1-203ENST00000565248 ZNF644Q9H582 1327 aaPredicted RBP24.49■■□□□ 1.51
THUMPD1-203ENST00000565248 PLXNC1O60486 1568 aa24.48■■□□□ 1.51
THUMPD1-203ENST00000565248 PTPRKQ15262 1439 aa24.48■■□□□ 1.51
THUMPD1-203ENST00000565248 INO80Q9ULG1 1556 aaPredicted RBP24.47■■□□□ 1.51
THUMPD1-203ENST00000565248 DNMT1P26358 1616 aaKnown RBP24.46■■□□□ 1.51
THUMPD1-203ENST00000565248 DAPK1P53355 1430 aa24.44■■□□□ 1.5
THUMPD1-203ENST00000565248 ADGBQ8N7X0 1667 aa24.44■■□□□ 1.5
THUMPD1-203ENST00000565248 RSPH4AQ5TD94 716 aa24.44■■□□□ 1.5
THUMPD1-203ENST00000565248 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
THUMPD1-203ENST00000565248 ABCC5O15440 1437 aa24.41■■□□□ 1.5
THUMPD1-203ENST00000565248 ARHGEF5Q12774 1597 aa24.41■■□□□ 1.5
THUMPD1-203ENST00000565248 A2ML1A8K2U0 1454 aa24.4■■□□□ 1.5
THUMPD1-203ENST00000565248 TOM1O60784 492 aa24.39■■□□□ 1.49
THUMPD1-203ENST00000565248 CCDC141Q6ZP82 1450 aa24.38■■□□□ 1.49
THUMPD1-203ENST00000565248 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
THUMPD1-203ENST00000565248 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
THUMPD1-203ENST00000565248 SHANK2Q9UPX8 1470 aa24.37■■□□□ 1.49
THUMPD1-203ENST00000565248 SETD5Q9C0A6 1442 aa24.35■■□□□ 1.49
THUMPD1-203ENST00000565248 MBD5Q9P267 1494 aa24.35■■□□□ 1.49
THUMPD1-203ENST00000565248 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
THUMPD1-203ENST00000565248 PIP4K2BP78356 416 aa24.35■■□□□ 1.49
THUMPD1-203ENST00000565248 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
THUMPD1-203ENST00000565248 CPS1P31327 1500 aa24.35■■□□□ 1.49
THUMPD1-203ENST00000565248 CROCC2H7BZ55 1655 aa24.34■■□□□ 1.49
THUMPD1-203ENST00000565248 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
THUMPD1-203ENST00000565248 HSPA1LP34931 641 aa24.33■■□□□ 1.49
THUMPD1-203ENST00000565248 HFM1A2PYH4 1435 aa24.33■■□□□ 1.49
THUMPD1-203ENST00000565248 RTEL1-TNFRSF6BF6WH68 1400 aa24.32■■□□□ 1.48
THUMPD1-203ENST00000565248 DHX29Q7Z478 1369 aaKnown RBP24.3■■□□□ 1.48
THUMPD1-203ENST00000565248 TNRQ92752 1358 aa24.3■■□□□ 1.48
THUMPD1-203ENST00000565248 ANKRD30AQ9BXX3 1397 aa24.3■■□□□ 1.48
THUMPD1-203ENST00000565248 ANKLE2Q86XL3 938 aa24.29■■□□□ 1.48
THUMPD1-203ENST00000565248 ADGRL2O95490 1459 aa24.29■■□□□ 1.48
THUMPD1-203ENST00000565248 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
THUMPD1-203ENST00000565248 KIF3BO15066 747 aa24.27■■□□□ 1.48
THUMPD1-203ENST00000565248 HRCP23327 699 aa24.27■■□□□ 1.48
THUMPD1-203ENST00000565248 THEMISQ8N1K5 641 aaPredicted RBP24.27■■□□□ 1.48
THUMPD1-203ENST00000565248 RAB3GAP2Q9H2M9 1393 aa24.27■■□□□ 1.48
THUMPD1-203ENST00000565248 FAM135AQ9P2D6 1515 aa24.26■■□□□ 1.47
THUMPD1-203ENST00000565248 RRP7BPQ9NSQ0 103 aa24.26■■□□□ 1.47
THUMPD1-203ENST00000565248 NAIPQ13075 1403 aa24.26■■□□□ 1.47
THUMPD1-203ENST00000565248 FBXO31Q5XUX0 539 aaPredicted RBP24.25■■□□□ 1.47
THUMPD1-203ENST00000565248 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
THUMPD1-203ENST00000565248 WASHC2CQ9Y4E1 1318 aa24.25■■□□□ 1.47
THUMPD1-203ENST00000565248 PZPP20742 1482 aa24.25■■□□□ 1.47
THUMPD1-203ENST00000565248 KDM5DQ9BY66 1539 aa24.25■■□□□ 1.47
THUMPD1-203ENST00000565248 NEURL4Q96JN8 1562 aa24.25■■□□□ 1.47
THUMPD1-203ENST00000565248 MAST1Q9Y2H9 1570 aa24.25■■□□□ 1.47
THUMPD1-203ENST00000565248 GCC2Q8IWJ2 1684 aa24.24■■□□□ 1.47
THUMPD1-203ENST00000565248 CCER1Q8TC90 406 aaPredicted RBP24.2■■□□□ 1.46
THUMPD1-203ENST00000565248 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
THUMPD1-203ENST00000565248 UGGT1Q9NYU2 1555 aa24.18■■□□□ 1.46
THUMPD1-203ENST00000565248 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
THUMPD1-203ENST00000565248 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
THUMPD1-203ENST00000565248 VWDEQ8N2E2 1590 aa24.16■■□□□ 1.46
THUMPD1-203ENST00000565248 KIF15Q9NS87 1388 aa24.16■■□□□ 1.46
THUMPD1-203ENST00000565248 MED14O60244 1454 aa24.15■■□□□ 1.46
THUMPD1-203ENST00000565248 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
THUMPD1-203ENST00000565248 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
THUMPD1-203ENST00000565248 DUOX2Q9NRD8 1548 aa24.08■■□□□ 1.45
THUMPD1-203ENST00000565248 DHX57Q6P158 1386 aaKnown RBP24.06■■□□□ 1.44
THUMPD1-203ENST00000565248 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
THUMPD1-203ENST00000565248 ALKQ9UM73 1620 aa24.05■■□□□ 1.44
THUMPD1-203ENST00000565248 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
THUMPD1-203ENST00000565248 ZC3H13Q5T200 1668 aaKnown RBP24.04■■□□□ 1.44
THUMPD1-203ENST00000565248 SYNMO15061 1565 aa24.03■■□□□ 1.44
THUMPD1-203ENST00000565248 RNF17Q9BXT8 1623 aaKnown RBP24.03■■□□□ 1.44
THUMPD1-203ENST00000565248 ERBINQ96RT1 1412 aa24.03■■□□□ 1.44
THUMPD1-203ENST00000565248 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
THUMPD1-203ENST00000565248 CLSPNQ9HAW4 1339 aa24.03■■□□□ 1.44
THUMPD1-203ENST00000565248 STRCP1A6NGW2 1772 aa24.01■■□□□ 1.43
THUMPD1-203ENST00000565248 ABCC3O15438 1527 aa23.99■■□□□ 1.43
THUMPD1-203ENST00000565248 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
THUMPD1-203ENST00000565248 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.43
THUMPD1-203ENST00000565248 CFAP65Q6ZU64 1925 aaKnown RBP23.94■■□□□ 1.42
THUMPD1-203ENST00000565248 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
THUMPD1-203ENST00000565248 UBR1Q8IWV7 1749 aa23.93■■□□□ 1.42
THUMPD1-203ENST00000565248 TXNDC2Q86VQ3 553 aa23.91■■□□□ 1.42
THUMPD1-203ENST00000565248 NUP155O75694 1391 aa23.91■■□□□ 1.42
THUMPD1-203ENST00000565248 EID1Q9Y6B2 187 aa23.9■■□□□ 1.42
THUMPD1-203ENST00000565248 CEP152O94986 1710 aa23.9■■□□□ 1.42
THUMPD1-203ENST00000565248 MPHOSPH9Q99550 1183 aa23.89■■□□□ 1.41
THUMPD1-203ENST00000565248 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.41
THUMPD1-203ENST00000565248 UNC13BO14795 1591 aa23.89■■□□□ 1.41
THUMPD1-203ENST00000565248 FOXD1Q16676 465 aa23.87■■□□□ 1.41
THUMPD1-203ENST00000565248 SLIT1O75093 1534 aa23.85■■□□□ 1.41
THUMPD1-203ENST00000565248 MROH1Q8NDA8 1641 aa23.85■■□□□ 1.41
THUMPD1-203ENST00000565248 LTKP29376 864 aa23.85■■□□□ 1.41
THUMPD1-203ENST00000565248 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
THUMPD1-203ENST00000565248 KANK1Q14678 1352 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms