RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
HERC2-207ENST00000564734 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
HERC2-207ENST00000564734 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
HERC2-207ENST00000564734 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
HERC2-207ENST00000564734 RBM19Q9Y4C8 960 aaKnown RBP20.85■□□□□ 0.93
HERC2-207ENST00000564734 ARHGAP5Q13017 1502 aa20.85■□□□□ 0.93
HERC2-207ENST00000564734 DCAF11Q8TEB1 546 aa20.85■□□□□ 0.93
HERC2-207ENST00000564734 PLA2R1Q13018 1463 aa20.84■□□□□ 0.93
HERC2-207ENST00000564734 PLXNC1O60486 1568 aa20.84■□□□□ 0.93
HERC2-207ENST00000564734 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.93
HERC2-207ENST00000564734 ST20-MTHFSA0A0A6YYL1 179 aa20.82■□□□□ 0.92
HERC2-207ENST00000564734 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
HERC2-207ENST00000564734 PRAG1Q86YV5 1406 aa20.81■□□□□ 0.92
HERC2-207ENST00000564734 TRPM1Q7Z4N2 1603 aa20.81■□□□□ 0.92
HERC2-207ENST00000564734 POLR3GLQ9BT43 218 aa20.81■□□□□ 0.92
HERC2-207ENST00000564734 MYO5CQ9NQX4 1742 aa20.8■□□□□ 0.92
HERC2-207ENST00000564734 E9PCH4 1651 aa20.8■□□□□ 0.92
HERC2-207ENST00000564734 IQGAP3Q86VI3 1631 aa20.8■□□□□ 0.92
HERC2-207ENST00000564734 PPP4R2Q9NY27 417 aa20.79■□□□□ 0.92
HERC2-207ENST00000564734 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
HERC2-207ENST00000564734 SMG6Q86US8 1419 aaKnown RBP20.79■□□□□ 0.92
HERC2-207ENST00000564734 PNISRQ8TF01 805 aaKnown RBP20.77■□□□□ 0.92
HERC2-207ENST00000564734 MAGI2Q86UL8 1455 aa20.77■□□□□ 0.92
HERC2-207ENST00000564734 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
HERC2-207ENST00000564734 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
HERC2-207ENST00000564734 DUOX2Q9NRD8 1548 aa20.76■□□□□ 0.91
HERC2-207ENST00000564734 A2MP01023 1474 aa20.76■□□□□ 0.91
HERC2-207ENST00000564734 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
HERC2-207ENST00000564734 ATP10AO60312 1499 aa20.75■□□□□ 0.91
HERC2-207ENST00000564734 PLCH2O75038 1416 aa20.75■□□□□ 0.91
HERC2-207ENST00000564734 LAMC1P11047 1609 aa20.73■□□□□ 0.91
HERC2-207ENST00000564734 UHRF1BP1LA0JNW5 1464 aa20.73■□□□□ 0.91
HERC2-207ENST00000564734 ERBINQ96RT1 1412 aa20.73■□□□□ 0.91
HERC2-207ENST00000564734 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
HERC2-207ENST00000564734 ANP32EQ9BTT0 268 aa20.71■□□□□ 0.91
HERC2-207ENST00000564734 ZCCHC11Q5TAX3 1644 aaKnown RBP20.71■□□□□ 0.91
HERC2-207ENST00000564734 RNF123Q5XPI4 1314 aa20.71■□□□□ 0.91
HERC2-207ENST00000564734 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
HERC2-207ENST00000564734 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
HERC2-207ENST00000564734 RALBP1Q15311 655 aa20.7■□□□□ 0.9
HERC2-207ENST00000564734 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
HERC2-207ENST00000564734 NUDCQ9Y266 331 aa20.69■□□□□ 0.9
HERC2-207ENST00000564734 PRDM15P57071 1507 aaPredicted RBP20.69■□□□□ 0.9
HERC2-207ENST00000564734 MYBBP1AQ9BQG0 1328 aaKnown RBP20.69■□□□□ 0.9
HERC2-207ENST00000564734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■■□□□ 12.2
HERC2-207ENST00000564734 ABCC1P33527 1531 aa20.68■□□□□ 0.9
HERC2-207ENST00000564734 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
HERC2-207ENST00000564734 RGL3Q3MIN7 710 aa20.67■□□□□ 0.9
HERC2-207ENST00000564734 EFCAB2Q5VUJ9 269 aa20.65■□□□□ 0.9
HERC2-207ENST00000564734 EIF2AK4Q9P2K8 1649 aaKnown RBP20.65■□□□□ 0.9
HERC2-207ENST00000564734 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
HERC2-207ENST00000564734 TRAPPC8Q9Y2L5 1435 aa20.64■□□□□ 0.9
HERC2-207ENST00000564734 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
HERC2-207ENST00000564734 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.89
HERC2-207ENST00000564734 TESK2Q96S53 571 aa20.64■□□□□ 0.89
HERC2-207ENST00000564734 ASXL2Q76L83 1435 aa20.63■□□□□ 0.89
HERC2-207ENST00000564734 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
HERC2-207ENST00000564734 B4GALNT3Q6L9W6 998 aa20.62■□□□□ 0.89
HERC2-207ENST00000564734 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
HERC2-207ENST00000564734 FANCIQ9NVI1 1328 aa20.6■□□□□ 0.89
HERC2-207ENST00000564734 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
HERC2-207ENST00000564734 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
HERC2-207ENST00000564734 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
HERC2-207ENST00000564734 FAM69CQ0P6D2 419 aa20.58■□□□□ 0.89
HERC2-207ENST00000564734 WASHC2CQ9Y4E1 1318 aa20.57■□□□□ 0.88
HERC2-207ENST00000564734 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
HERC2-207ENST00000564734 MSH5O43196 834 aa20.56■□□□□ 0.88
HERC2-207ENST00000564734 ZFYVE16Q7Z3T8 1539 aa20.55■□□□□ 0.88
HERC2-207ENST00000564734 WDR7Q9Y4E6 1490 aa20.55■□□□□ 0.88
HERC2-207ENST00000564734 PTPRTO14522 1441 aa20.53■□□□□ 0.88
HERC2-207ENST00000564734 TRPM2O94759 1503 aa20.52■□□□□ 0.88
HERC2-207ENST00000564734 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
HERC2-207ENST00000564734 MYT1LQ9UL68 1186 aa20.52■□□□□ 0.88
HERC2-207ENST00000564734 SPAG9O60271 1321 aaKnown RBP20.52■□□□□ 0.88
HERC2-207ENST00000564734 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
HERC2-207ENST00000564734 SENP3-EIF4A1A0A087X0R7 540 aa20.51■□□□□ 0.87
HERC2-207ENST00000564734 INSRP06213 1382 aa20.51■□□□□ 0.87
HERC2-207ENST00000564734 TMF1P82094 1093 aa20.5■□□□□ 0.87
HERC2-207ENST00000564734 AFAP1Q8N556 730 aa20.5■□□□□ 0.87
HERC2-207ENST00000564734 PANK3Q9H999 370 aa20.49■□□□□ 0.87
HERC2-207ENST00000564734 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
HERC2-207ENST00000564734 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
HERC2-207ENST00000564734 VWDEQ8N2E2 1590 aa20.48■□□□□ 0.87
HERC2-207ENST00000564734 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
HERC2-207ENST00000564734 CEP152O94986 1710 aa20.47■□□□□ 0.87
HERC2-207ENST00000564734 SPHKAPQ2M3C7 1700 aa20.47■□□□□ 0.87
HERC2-207ENST00000564734 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
HERC2-207ENST00000564734 CLTCL1P53675 1640 aa20.46■□□□□ 0.87
HERC2-207ENST00000564734 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
HERC2-207ENST00000564734 TET3O43151 1660 aa20.45■□□□□ 0.86
HERC2-207ENST00000564734 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
HERC2-207ENST00000564734 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
HERC2-207ENST00000564734 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
HERC2-207ENST00000564734 ATP7AQ04656 1500 aa20.43■□□□□ 0.86
HERC2-207ENST00000564734 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
HERC2-207ENST00000564734 FANCAO15360 1455 aa20.42■□□□□ 0.86
HERC2-207ENST00000564734 NEURL4Q96JN8 1562 aa20.42■□□□□ 0.86
HERC2-207ENST00000564734 CD109Q6YHK3 1445 aa20.41■□□□□ 0.86
HERC2-207ENST00000564734 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
HERC2-207ENST00000564734 CCDC136Q96JN2 1154 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms