RNA–Protein interactions for RNA: ENST00000564726.5

RBBP6-208, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 3

Gene RBBP6, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-208	ENST00000564726	MYT1L	Q9UL68	1186 aa		12.58	□□□□□ -0.4
RBBP6-208	ENST00000564726	ARHGEF1	Q92888	912 aa	Known RBP	12.55	□□□□□ -0.4
RBBP6-208	ENST00000564726	TK2	O00142	265 aa		12.54	□□□□□ -0.4
RBBP6-208	ENST00000564726	RNF166	Q96A37	237 aa	Predicted RBP	12.53	□□□□□ -0.4
RBBP6-208	ENST00000564726	C6orf132	Q5T0Z8	1188 aa		12.52	□□□□□ -0.41
RBBP6-208	ENST00000564726	P3H3	Q8IVL6	736 aa		12.52	□□□□□ -0.41
RBBP6-208	ENST00000564726	VPS9D1	Q9Y2B5	631 aa		12.52	□□□□□ -0.41
RBBP6-208	ENST00000564726	MAP3K7	O43318	606 aa		12.51	□□□□□ -0.41
RBBP6-208	ENST00000564726	COL9A1	P20849	921 aa		12.51	□□□□□ -0.41
RBBP6-208	ENST00000564726	STAC3	Q96MF2	364 aa		12.51	□□□□□ -0.41
RBBP6-208	ENST00000564726	KDM2A	Q9Y2K7	1162 aa		12.51	□□□□□ -0.41
RBBP6-208	ENST00000564726	ZBED2	Q9BTP6	218 aa		12.5	□□□□□ -0.41
RBBP6-208	ENST00000564726	PPP1R3G	B7ZBB8	358 aa		12.49	□□□□□ -0.41
RBBP6-208	ENST00000564726	HR	O43593	1189 aa		12.49	□□□□□ -0.41
RBBP6-208	ENST00000564726	EN1	Q05925	392 aa	Predicted RBP	12.49	□□□□□ -0.41
RBBP6-208	ENST00000564726	TSR1	Q2NL82	804 aa	Known RBP	12.48	□□□□□ -0.41
RBBP6-208	ENST00000564726	PRIM1	P49642	420 aa	Known RBP	12.46	□□□□□ -0.41
RBBP6-208	ENST00000564726	PROX2	Q3B8N5	592 aa		12.46	□□□□□ -0.41
RBBP6-208	ENST00000564726	SLC4A5	Q9BY07	1137 aa		12.46	□□□□□ -0.41
RBBP6-208	ENST00000564726	OSBP	P22059	807 aa		12.45	□□□□□ -0.42
RBBP6-208	ENST00000564726	MLLT3	P42568	568 aa	Predicted RBP	12.45	□□□□□ -0.42
RBBP6-208	ENST00000564726	VSIG10	Q8N0Z9	540 aa		12.42	□□□□□ -0.42
RBBP6-208	ENST00000564726	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.4	□□□□□ -0.42
RBBP6-208	ENST00000564726	SEMA3E	O15041	775 aa		12.4	□□□□□ -0.42
RBBP6-208	ENST00000564726	MRPL50	Q8N5N7	158 aa	Known RBP	12.39	□□□□□ -0.43
RBBP6-208	ENST00000564726	KCTD12	Q96CX2	325 aa	Known RBP	12.38	□□□□□ -0.43
RBBP6-208	ENST00000564726	CDHR5	Q9HBB8	845 aa		12.38	□□□□□ -0.43
RBBP6-208	ENST00000564726	KIAA1468	Q9P260	1216 aa		12.38	□□□□□ -0.43
RBBP6-208	ENST00000564726	NBPF3	Q9H094	633 aa		12.37	□□□□□ -0.43
RBBP6-208	ENST00000564726	RABGEF1	Q9UJ41	708 aa		12.37	□□□□□ -0.43
RBBP6-208	ENST00000564726	GOLGA8CP	A6NN73	597 aa		12.36	□□□□□ -0.43
RBBP6-208	ENST00000564726	TRIM6-TRIM34	B2RNG4	842 aa		12.35	□□□□□ -0.43
RBBP6-208	ENST00000564726	CDCA7L	Q96GN5	454 aa		12.32	□□□□□ -0.44
RBBP6-208	ENST00000564726	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.32	□□□□□ -0.44
RBBP6-208	ENST00000564726	TSKS	Q9UJT2	592 aa		12.32	□□□□□ -0.44
RBBP6-208	ENST00000564726	ONECUT3	O60422	494 aa	Predicted RBP	12.31	□□□□□ -0.44
RBBP6-208	ENST00000564726	PRSS12	P56730	875 aa		12.31	□□□□□ -0.44
RBBP6-208	ENST00000564726	CERK	Q8TCT0	537 aa		12.31	□□□□□ -0.44
RBBP6-208	ENST00000564726	WNT2B	Q93097	391 aa		12.3	□□□□□ -0.44
RBBP6-208	ENST00000564726	PACS2	Q86VP3	889 aa		12.29	□□□□□ -0.44
RBBP6-208	ENST00000564726	PTPN5	P54829	565 aa		12.28	□□□□□ -0.44
RBBP6-208	ENST00000564726	HCST	Q9UBK5	93 aa		12.28	□□□□□ -0.44
RBBP6-208	ENST00000564726	NUTM2F	A1L443	756 aa		12.27	□□□□□ -0.45
RBBP6-208	ENST00000564726	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.27	□□□□□ -0.45
RBBP6-208	ENST00000564726	FAM198A	Q9UFP1	575 aa		12.27	□□□□□ -0.45
RBBP6-208	ENST00000564726	TESPA1	A2RU30	521 aa	Predicted RBP	12.26	□□□□□ -0.45
RBBP6-208	ENST00000564726	SMAP	O00193	183 aa		12.25	□□□□□ -0.45
RBBP6-208	ENST00000564726	LAPTM4B	Q86VI4	370 aa		12.25	□□□□□ -0.45
RBBP6-208	ENST00000564726	ZFR	Q96KR1	1074 aa	Known RBP	12.24	□□□□□ -0.45
RBBP6-208	ENST00000564726	RBM26	Q5T8P6	1007 aa	Known RBP	12.23	□□□□□ -0.45
RBBP6-208	ENST00000564726	PADI6	Q6TGC4	694 aa		12.23	□□□□□ -0.45
RBBP6-208	ENST00000564726	THSD4	Q6ZMP0	1018 aa		12.23	□□□□□ -0.45
RBBP6-208	ENST00000564726	ANKK1	Q8NFD2	765 aa		12.23	□□□□□ -0.45
RBBP6-208	ENST00000564726	C3orf80	F5H4A9	247 aa		12.22	□□□□□ -0.45
RBBP6-208	ENST00000564726	FAM98C	Q17RN3	349 aa	Known RBP	12.22	□□□□□ -0.45
RBBP6-208	ENST00000564726	SMYD5	Q6GMV2	418 aa		12.22	□□□□□ -0.45
RBBP6-208	ENST00000564726	PNMA3	Q9UL41	463 aa		12.22	□□□□□ -0.45
RBBP6-208	ENST00000564726	TATDN2	Q93075	761 aa		12.21	□□□□□ -0.45
RBBP6-208	ENST00000564726	BCAM	P50895	628 aa		12.2	□□□□□ -0.46
RBBP6-208	ENST00000564726	PTGDR	Q13258	359 aa		12.2	□□□□□ -0.46
RBBP6-208	ENST00000564726	NBPF26	B4DH59	902 aa		12.19	□□□□□ -0.46
RBBP6-208	ENST00000564726	NUDT18	Q6ZVK8	323 aa		12.19	□□□□□ -0.46
RBBP6-208	ENST00000564726	RBM27	Q9P2N5	1060 aa	Known RBP	12.19	□□□□□ -0.46
RBBP6-208	ENST00000564726	TTC13	Q8NBP0	860 aa		12.16	□□□□□ -0.46
RBBP6-208	ENST00000564726	SOWAHB	A6NEL2	793 aa		12.15	□□□□□ -0.46
RBBP6-208	ENST00000564726	FCHSD2	O94868	740 aa		12.14	□□□□□ -0.47
RBBP6-208	ENST00000564726	LRCH3	Q96II8	777 aa		12.14	□□□□□ -0.47
RBBP6-208	ENST00000564726	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.14	□□□□□ -0.47
RBBP6-208	ENST00000564726	SAMD7	Q7Z3H4	446 aa		12.12	□□□□□ -0.47
RBBP6-208	ENST00000564726	FAM161A	Q3B820	660 aa		12.1	□□□□□ -0.47
RBBP6-208	ENST00000564726	WBP1L	Q9NX94	342 aa		12.1	□□□□□ -0.47
RBBP6-208	ENST00000564726	PLA2G2E	Q9NZK7	142 aa		12.1	□□□□□ -0.47
RBBP6-208	ENST00000564726	HPS5	Q9UPZ3	1129 aa		12.09	□□□□□ -0.47
RBBP6-208	ENST00000564726	TULP1	O00294	542 aa	Predicted RBP	12.08	□□□□□ -0.48
RBBP6-208	ENST00000564726	HDGF	P51858	240 aa	Known RBP	12.08	□□□□□ -0.48
RBBP6-208	ENST00000564726	RNF40	O75150	1001 aa		12.07	□□□□□ -0.48
RBBP6-208	ENST00000564726	HIC1	Q14526	733 aa		12.06	□□□□□ -0.48
RBBP6-208	ENST00000564726	GPIHBP1	Q8IV16	184 aa		12.06	□□□□□ -0.48
RBBP6-208	ENST00000564726	EYA1	Q99502	592 aa		12.06	□□□□□ -0.48
RBBP6-208	ENST00000564726	TSR3	Q9UJK0	312 aa	Known RBP	12.06	□□□□□ -0.48
RBBP6-208	ENST00000564726	FECH	P22830	423 aa		12.05	□□□□□ -0.48
RBBP6-208	ENST00000564726	ADGRG1	Q9Y653	693 aa		12.05	□□□□□ -0.48
RBBP6-208	ENST00000564726	PPP4C	P60510	307 aa		12.04	□□□□□ -0.48
RBBP6-208	ENST00000564726	RBM46	Q8TBY0	533 aa	Known RBP	12.04	□□□□□ -0.48
RBBP6-208	ENST00000564726	GNPAT	O15228	680 aa		12.03	□□□□□ -0.48
RBBP6-208	ENST00000564726	GPR37	O15354	613 aa		12.03	□□□□□ -0.48
RBBP6-208	ENST00000564726	SWT1	Q5T5J6	900 aa	Known RBP	12.03	□□□□□ -0.48
RBBP6-208	ENST00000564726	NYAP1	Q6ZVC0	841 aa		11.99	□□□□□ -0.49
RBBP6-208	ENST00000564726	RCCD1	A6NED2	376 aa		11.98	□□□□□ -0.49
RBBP6-208	ENST00000564726	DNAJB2	P25686	324 aa		11.98	□□□□□ -0.49
RBBP6-208	ENST00000564726	OAT	P04181	439 aa		11.97	□□□□□ -0.49
RBBP6-208	ENST00000564726	SLF2	Q8IX21	1173 aa		11.96	□□□□□ -0.49
RBBP6-208	ENST00000564726	SLC4A3	P48751	1232 aa		11.95	□□□□□ -0.5
RBBP6-208	ENST00000564726	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
RBBP6-208	ENST00000564726	PXYLP1	Q8TE99	480 aa		11.95	□□□□□ -0.5
RBBP6-208	ENST00000564726	METTL3	Q86U44	580 aa	Known RBP	11.94	□□□□□ -0.5
RBBP6-208	ENST00000564726	TMEM134	Q9H6X4	195 aa		11.94	□□□□□ -0.5
RBBP6-208	ENST00000564726	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.91	□□□□□ -0.5
RBBP6-208	ENST00000564726	LMOD2	Q6P5Q4	547 aa		11.91	□□□□□ -0.5
RBBP6-208	ENST00000564726	APLP1	P51693	650 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms