RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
DENND4A-206ENST00000564674 ADAMTS8Q9UP79 889 aa24.2■■□□□ 1.46
DENND4A-206ENST00000564674 PLEKHD1A6NEE1 506 aa24.19■■□□□ 1.46
DENND4A-206ENST00000564674 EIF5BO60841 1220 aaKnown RBP24.19■■□□□ 1.46
DENND4A-206ENST00000564674 NFKBIBQ15653 356 aa24.19■■□□□ 1.46
DENND4A-206ENST00000564674 ARID4BQ4LE39 1312 aaPredicted RBP24.19■■□□□ 1.46
DENND4A-206ENST00000564674 PLB1Q6P1J6 1458 aa24.17■■□□□ 1.46
DENND4A-206ENST00000564674 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
DENND4A-206ENST00000564674 DNMT1P26358 1616 aaKnown RBP24.16■■□□□ 1.46
DENND4A-206ENST00000564674 MS4A1P11836 297 aa24.16■■□□□ 1.46
DENND4A-206ENST00000564674 ARXQ96QS3 562 aa24.15■■□□□ 1.46
DENND4A-206ENST00000564674 PDE3BQ13370 1112 aa24.14■■□□□ 1.45
DENND4A-206ENST00000564674 FRAT1Q92837 279 aaPredicted RBP24.14■■□□□ 1.45
DENND4A-206ENST00000564674 KDM5CP41229 1560 aa24.13■■□□□ 1.45
DENND4A-206ENST00000564674 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
DENND4A-206ENST00000564674 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
DENND4A-206ENST00000564674 PER1O15534 1290 aaPredicted RBP24.12■■□□□ 1.45
DENND4A-206ENST00000564674 GSE1Q14687 1217 aa24.12■■□□□ 1.45
DENND4A-206ENST00000564674 WDR43Q15061 677 aaKnown RBP eCLIP24.12■■□□□ 1.45
DENND4A-206ENST00000564674 DDRGK1Q96HY6 314 aa24.11■■□□□ 1.45
DENND4A-206ENST00000564674 GPATCH8Q9UKJ3 1502 aaKnown RBP24.11■■□□□ 1.45
DENND4A-206ENST00000564674 TROQ12816 1431 aaPredicted RBP24.09■■□□□ 1.45
DENND4A-206ENST00000564674 FRAT2O75474 233 aaPredicted RBP24.09■■□□□ 1.45
DENND4A-206ENST00000564674 USP35Q9P2H5 1018 aa24.08■■□□□ 1.45
DENND4A-206ENST00000564674 DISP3Q9P2K9 1392 aa24.08■■□□□ 1.45
DENND4A-206ENST00000564674 RALGAPBQ86X10 1494 aa24.07■■□□□ 1.44
DENND4A-206ENST00000564674 KIAA0586Q9BVV6 1533 aa24.06■■□□□ 1.44
DENND4A-206ENST00000564674 DISP1Q96F81 1524 aa24.04■■□□□ 1.44
DENND4A-206ENST00000564674 PARD3Q8TEW0 1356 aa24.04■■□□□ 1.44
DENND4A-206ENST00000564674 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
DENND4A-206ENST00000564674 C9orf84Q5VXU9 1444 aa24.03■■□□□ 1.44
DENND4A-206ENST00000564674 JPH4Q96JJ6 628 aa24.03■■□□□ 1.44
DENND4A-206ENST00000564674 KIF14Q15058 1648 aa24.02■■□□□ 1.44
DENND4A-206ENST00000564674 TMF1P82094 1093 aa24.02■■□□□ 1.44
DENND4A-206ENST00000564674 BCAR3O75815 825 aa24.01■■□□□ 1.43
DENND4A-206ENST00000564674 NEUROD2Q15784 382 aa24■■□□□ 1.43
DENND4A-206ENST00000564674 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
DENND4A-206ENST00000564674 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
DENND4A-206ENST00000564674 POLR1AO95602 1720 aaPredicted RBP23.99■■□□□ 1.43
DENND4A-206ENST00000564674 FAM161AQ3B820 660 aa23.99■■□□□ 1.43
DENND4A-206ENST00000564674 CCDC144AA2RUR9 1427 aa23.99■■□□□ 1.43
DENND4A-206ENST00000564674 TESK2Q96S53 571 aa23.98■■□□□ 1.43
DENND4A-206ENST00000564674 SLKQ9H2G2 1235 aaPredicted RBP23.98■■□□□ 1.43
DENND4A-206ENST00000564674 UHRF1BP1Q6BDS2 1440 aa23.98■■□□□ 1.43
DENND4A-206ENST00000564674 GOLGA2Q08379 1002 aa23.97■■□□□ 1.43
DENND4A-206ENST00000564674 C8orf34Q49A92 452 aa23.96■■□□□ 1.43
DENND4A-206ENST00000564674 SPINK5Q9NQ38 1064 aaPredicted RBP23.96■■□□□ 1.43
DENND4A-206ENST00000564674 PLEKHH1Q9ULM0 1364 aa23.96■■□□□ 1.43
DENND4A-206ENST00000564674 APAF1O14727 1248 aa23.96■■□□□ 1.43
DENND4A-206ENST00000564674 DUSP27Q5VZP5 1158 aa23.96■■□□□ 1.43
DENND4A-206ENST00000564674 CENPQQ7L2Z9 268 aaPredicted RBP23.96■■□□□ 1.43
DENND4A-206ENST00000564674 WASHC2CQ9Y4E1 1318 aa23.96■■□□□ 1.43
DENND4A-206ENST00000564674 CANXP27824 592 aaKnown RBP23.95■■□□□ 1.43
DENND4A-206ENST00000564674 SPRYD3Q8NCJ5 442 aa23.95■■□□□ 1.42
DENND4A-206ENST00000564674 PPP2R1AP30153 589 aa23.94■■□□□ 1.42
DENND4A-206ENST00000564674 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
DENND4A-206ENST00000564674 RAPGEF6Q8TEU7 1601 aa23.94■■□□□ 1.42
DENND4A-206ENST00000564674 TNNT2P45379 298 aaPredicted RBP23.94■■□□□ 1.42
DENND4A-206ENST00000564674 KIAA0556O60303 1618 aa23.92■■□□□ 1.42
DENND4A-206ENST00000564674 KDM2BQ8NHM5 1336 aa23.91■■□□□ 1.42
DENND4A-206ENST00000564674 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
DENND4A-206ENST00000564674 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.9■■□□□ 1.42
DENND4A-206ENST00000564674 IGHDP01880 384 aa23.88■■□□□ 1.41
DENND4A-206ENST00000564674 COG6Q9Y2V7 657 aa23.88■■□□□ 1.41
DENND4A-206ENST00000564674 SEC24BO95487 1268 aa23.87■■□□□ 1.41
DENND4A-206ENST00000564674 PANK1Q8TE04 598 aa23.87■■□□□ 1.41
DENND4A-206ENST00000564674 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
DENND4A-206ENST00000564674 PRAG1Q86YV5 1406 aa23.87■■□□□ 1.41
DENND4A-206ENST00000564674 RRP7AQ9Y3A4 280 aaKnown RBP23.86■■□□□ 1.41
DENND4A-206ENST00000564674 ERBINQ96RT1 1412 aa23.86■■□□□ 1.41
DENND4A-206ENST00000564674 BCL2L13Q9BXK5 485 aa23.86■■□□□ 1.41
DENND4A-206ENST00000564674 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
DENND4A-206ENST00000564674 ADGRL2O95490 1459 aa23.84■■□□□ 1.41
DENND4A-206ENST00000564674 POGKQ9P215 609 aa23.83■■□□□ 1.41
DENND4A-206ENST00000564674 CLUAP1Q96AJ1 413 aa23.81■■□□□ 1.4
DENND4A-206ENST00000564674 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
DENND4A-206ENST00000564674 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
DENND4A-206ENST00000564674 SLFN5Q08AF3 891 aa23.8■■□□□ 1.4
DENND4A-206ENST00000564674 GZF1Q9H116 711 aaPredicted RBP23.78■■□□□ 1.4
DENND4A-206ENST00000564674 BLMP54132 1417 aaPredicted RBP23.78■■□□□ 1.4
DENND4A-206ENST00000564674 ARHGEF12Q9NZN5 1544 aa23.77■■□□□ 1.4
DENND4A-206ENST00000564674 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
DENND4A-206ENST00000564674 TNNQ9UQP3 1299 aa23.77■■□□□ 1.4
DENND4A-206ENST00000564674 AMER1Q5JTC6 1135 aaPredicted RBP23.76■■□□□ 1.39
DENND4A-206ENST00000564674 A2MP01023 1474 aa23.75■■□□□ 1.39
DENND4A-206ENST00000564674 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
DENND4A-206ENST00000564674 ADGBQ8N7X0 1667 aa23.74■■□□□ 1.39
DENND4A-206ENST00000564674 ATP10BO94823 1461 aa23.74■■□□□ 1.39
DENND4A-206ENST00000564674 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
DENND4A-206ENST00000564674 COL17A1Q9UMD9 1497 aaPredicted RBP23.73■■□□□ 1.39
DENND4A-206ENST00000564674 PLA2R1Q13018 1463 aa23.71■■□□□ 1.39
DENND4A-206ENST00000564674 MAGI2Q86UL8 1455 aa23.71■■□□□ 1.39
DENND4A-206ENST00000564674 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.39
DENND4A-206ENST00000564674 ZMYM4Q5VZL5 1548 aa23.7■■□□□ 1.38
DENND4A-206ENST00000564674 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
DENND4A-206ENST00000564674 PLEKHH2Q8IVE3 1493 aa23.69■■□□□ 1.38
DENND4A-206ENST00000564674 CEP170Q5SW79 1584 aa23.68■■□□□ 1.38
DENND4A-206ENST00000564674 CENPJQ9HC77 1338 aaPredicted RBP23.67■■□□□ 1.38
DENND4A-206ENST00000564674 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
DENND4A-206ENST00000564674 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms