RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 DISP3Q9P2K9 1392 aa19.75■□□□□ 0.75
HERC2-206ENST00000564519 NCOA1Q15788 1441 aa19.75■□□□□ 0.75
HERC2-206ENST00000564519 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
HERC2-206ENST00000564519 DAPK1P53355 1430 aa19.73■□□□□ 0.75
HERC2-206ENST00000564519 SHANK2Q9UPX8 1470 aa19.71■□□□□ 0.75
HERC2-206ENST00000564519 NCKAP5LQ9HCH0 1330 aa19.7■□□□□ 0.74
HERC2-206ENST00000564519 WASHC2CQ9Y4E1 1318 aa19.7■□□□□ 0.74
HERC2-206ENST00000564519 CAMSAP1Q5T5Y3 1602 aa19.69■□□□□ 0.74
HERC2-206ENST00000564519 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
HERC2-206ENST00000564519 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
HERC2-206ENST00000564519 DNMT1P26358 1616 aaKnown RBP19.69■□□□□ 0.74
HERC2-206ENST00000564519 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
HERC2-206ENST00000564519 PKD2Q13563 968 aa19.68■□□□□ 0.74
HERC2-206ENST00000564519 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
HERC2-206ENST00000564519 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
HERC2-206ENST00000564519 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
HERC2-206ENST00000564519 CROCC2H7BZ55 1655 aa19.67■□□□□ 0.74
HERC2-206ENST00000564519 DUOX2Q9NRD8 1548 aa19.66■□□□□ 0.74
HERC2-206ENST00000564519 FAM50AQ14320 339 aaKnown RBP19.66■□□□□ 0.74
HERC2-206ENST00000564519 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
HERC2-206ENST00000564519 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
HERC2-206ENST00000564519 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
HERC2-206ENST00000564519 LTBP4Q8N2S1 1624 aa19.63■□□□□ 0.73
HERC2-206ENST00000564519 MROH1Q8NDA8 1641 aa19.63■□□□□ 0.73
HERC2-206ENST00000564519 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
HERC2-206ENST00000564519 EIF2AK4Q9P2K8 1649 aaKnown RBP19.63■□□□□ 0.73
HERC2-206ENST00000564519 PZPP20742 1482 aa19.63■□□□□ 0.73
HERC2-206ENST00000564519 ABCC3O15438 1527 aa19.62■□□□□ 0.73
HERC2-206ENST00000564519 ZNF335Q9H4Z2 1342 aaPredicted RBP19.62■□□□□ 0.73
HERC2-206ENST00000564519 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
HERC2-206ENST00000564519 ERBINQ96RT1 1412 aa19.61■□□□□ 0.73
HERC2-206ENST00000564519 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
HERC2-206ENST00000564519 TNRQ92752 1358 aa19.6■□□□□ 0.73
HERC2-206ENST00000564519 ANKRD30AQ9BXX3 1397 aa19.6■□□□□ 0.73
HERC2-206ENST00000564519 CEP170BQ9Y4F5 1589 aaPredicted RBP19.6■□□□□ 0.73
HERC2-206ENST00000564519 ILDR2Q71H61 639 aa19.58■□□□□ 0.72
HERC2-206ENST00000564519 ZNF142P52746 1687 aaPredicted RBP19.57■□□□□ 0.72
HERC2-206ENST00000564519 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
HERC2-206ENST00000564519 ADGRL2O95490 1459 aa19.56■□□□□ 0.72
HERC2-206ENST00000564519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.72
HERC2-206ENST00000564519 SOCS7O14512 581 aa19.55■□□□□ 0.72
HERC2-206ENST00000564519 PRDM15P57071 1507 aaPredicted RBP19.55■□□□□ 0.72
HERC2-206ENST00000564519 SPATA31D1Q6ZQQ2 1576 aa19.54■□□□□ 0.72
HERC2-206ENST00000564519 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
HERC2-206ENST00000564519 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
HERC2-206ENST00000564519 CEP152O94986 1710 aa19.51■□□□□ 0.71
HERC2-206ENST00000564519 ERVK-7P63135 1459 aa19.51■□□□□ 0.71
HERC2-206ENST00000564519 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
HERC2-206ENST00000564519 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
HERC2-206ENST00000564519 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
HERC2-206ENST00000564519 ANKRD50Q9ULJ7 1429 aa19.49■□□□□ 0.71
HERC2-206ENST00000564519 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
HERC2-206ENST00000564519 KANK1Q14678 1352 aa19.47■□□□□ 0.71
HERC2-206ENST00000564519 ITGAEP38570 1179 aa19.47■□□□□ 0.71
HERC2-206ENST00000564519 ARHGAP31Q2M1Z3 1444 aa19.47■□□□□ 0.71
HERC2-206ENST00000564519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.46■□□□□ 0.71
HERC2-206ENST00000564519 VWDEQ8N2E2 1590 aa19.46■□□□□ 0.71
HERC2-206ENST00000564519 TOM1O60784 492 aa19.46■□□□□ 0.71
HERC2-206ENST00000564519 PIP4K2BP78356 416 aa19.45■□□□□ 0.7
HERC2-206ENST00000564519 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
HERC2-206ENST00000564519 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
HERC2-206ENST00000564519 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
HERC2-206ENST00000564519 RRBP1Q9P2E9 1410 aaKnown RBP19.41■□□□□ 0.7
HERC2-206ENST00000564519 CPS1P31327 1500 aa19.41■□□□□ 0.7
HERC2-206ENST00000564519 NEURL4Q96JN8 1562 aa19.4■□□□□ 0.7
HERC2-206ENST00000564519 EFCAB6Q5THR3 1501 aa19.37■□□□□ 0.69
HERC2-206ENST00000564519 NPHP4O75161 1426 aaPredicted RBP19.37■□□□□ 0.69
HERC2-206ENST00000564519 HSPA1LP34931 641 aa19.37■□□□□ 0.69
HERC2-206ENST00000564519 NOS1P29475 1434 aa19.35■□□□□ 0.69
HERC2-206ENST00000564519 CFAP65Q6ZU64 1925 aaKnown RBP19.35■□□□□ 0.69
HERC2-206ENST00000564519 POLR1AO95602 1720 aaPredicted RBP19.34■□□□□ 0.69
HERC2-206ENST00000564519 IDI1Q13907 227 aa19.34■□□□□ 0.69
HERC2-206ENST00000564519 UNC13BO14795 1591 aa19.34■□□□□ 0.69
HERC2-206ENST00000564519 SYNMO15061 1565 aa19.33■□□□□ 0.69
HERC2-206ENST00000564519 UBR1Q8IWV7 1749 aa19.33■□□□□ 0.68
HERC2-206ENST00000564519 MED14O60244 1454 aa19.33■□□□□ 0.68
HERC2-206ENST00000564519 LTKP29376 864 aa19.31■□□□□ 0.68
HERC2-206ENST00000564519 PIK3C2BO00750 1634 aa19.31■□□□□ 0.68
HERC2-206ENST00000564519 ARHGAP23Q9P227 1491 aa19.3■□□□□ 0.68
HERC2-206ENST00000564519 RPRD2Q5VT52 1461 aaKnown RBP19.29■□□□□ 0.68
HERC2-206ENST00000564519 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
HERC2-206ENST00000564519 SLIT1O75093 1534 aa19.29■□□□□ 0.68
HERC2-206ENST00000564519 NUP155O75694 1391 aa19.29■□□□□ 0.68
HERC2-206ENST00000564519 TET3O43151 1660 aa19.28■□□□□ 0.68
HERC2-206ENST00000564519 TXNDC2Q86VQ3 553 aa19.28■□□□□ 0.68
HERC2-206ENST00000564519 STAG3Q9UJ98 1225 aa19.28■□□□□ 0.68
HERC2-206ENST00000564519 TMEM2Q9UHN6 1383 aa19.28■□□□□ 0.68
HERC2-206ENST00000564519 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
HERC2-206ENST00000564519 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
HERC2-206ENST00000564519 SLC52A1Q9NWF4 448 aa19.26■□□□□ 0.67
HERC2-206ENST00000564519 EID1Q9Y6B2 187 aa19.26■□□□□ 0.67
HERC2-206ENST00000564519 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
HERC2-206ENST00000564519 IQGAP1P46940 1657 aa19.25■□□□□ 0.67
HERC2-206ENST00000564519 NAIPQ13075 1403 aa19.25■□□□□ 0.67
HERC2-206ENST00000564519 ADGRB3O60242 1522 aa19.23■□□□□ 0.67
HERC2-206ENST00000564519 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
HERC2-206ENST00000564519 E9PCH4 1651 aa19.22■□□□□ 0.67
HERC2-206ENST00000564519 MED1Q15648 1581 aaPredicted RBP19.21■□□□□ 0.67
HERC2-206ENST00000564519 KDM5AP29375 1690 aaKnown RBP19.19■□□□□ 0.66
HERC2-206ENST00000564519 LRRC7Q96NW7 1537 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms