RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
SPG7-210ENST00000564409 KDM5DQ9BY66 1539 aa23.55■■□□□ 1.36
SPG7-210ENST00000564409 CAMSAP1Q5T5Y3 1602 aa23.55■■□□□ 1.36
SPG7-210ENST00000564409 CEP170BQ9Y4F5 1589 aaPredicted RBP23.53■■□□□ 1.36
SPG7-210ENST00000564409 PLA2R1Q13018 1463 aa23.52■■□□□ 1.36
SPG7-210ENST00000564409 WASHC2CQ9Y4E1 1318 aa23.52■■□□□ 1.36
SPG7-210ENST00000564409 EIF2AK4Q9P2K8 1649 aaKnown RBP23.51■■□□□ 1.35
SPG7-210ENST00000564409 PZPP20742 1482 aa23.5■■□□□ 1.35
SPG7-210ENST00000564409 PKD2Q13563 968 aa23.5■■□□□ 1.35
SPG7-210ENST00000564409 RNF17Q9BXT8 1623 aaKnown RBP23.49■■□□□ 1.35
SPG7-210ENST00000564409 A2ML1A8K2U0 1454 aa23.49■■□□□ 1.35
SPG7-210ENST00000564409 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
SPG7-210ENST00000564409 TNRQ92752 1358 aa23.46■■□□□ 1.35
SPG7-210ENST00000564409 PTPN23Q9H3S7 1636 aa23.45■■□□□ 1.34
SPG7-210ENST00000564409 SHANK2Q9UPX8 1470 aa23.45■■□□□ 1.34
SPG7-210ENST00000564409 DUOX2Q9NRD8 1548 aa23.44■■□□□ 1.34
SPG7-210ENST00000564409 TCOF1Q13428 1488 aaKnown RBP23.44■■□□□ 1.34
SPG7-210ENST00000564409 CROCC2H7BZ55 1655 aa23.43■■□□□ 1.34
SPG7-210ENST00000564409 DNMT1P26358 1616 aaKnown RBP23.43■■□□□ 1.34
SPG7-210ENST00000564409 IQSEC2Q5JU85 1478 aa23.42■■□□□ 1.34
SPG7-210ENST00000564409 NCKAP5LQ9HCH0 1330 aa23.41■■□□□ 1.34
SPG7-210ENST00000564409 FGD6Q6ZV73 1430 aa23.41■■□□□ 1.34
SPG7-210ENST00000564409 LTBP4Q8N2S1 1624 aa23.41■■□□□ 1.34
SPG7-210ENST00000564409 FBXO31Q5XUX0 539 aaPredicted RBP23.4■■□□□ 1.34
SPG7-210ENST00000564409 NLRP1Q9C000 1473 aa23.4■■□□□ 1.34
SPG7-210ENST00000564409 ABCC5O15440 1437 aa23.4■■□□□ 1.34
SPG7-210ENST00000564409 ABCC3O15438 1527 aa23.39■■□□□ 1.34
SPG7-210ENST00000564409 ERBINQ96RT1 1412 aa23.37■■□□□ 1.33
SPG7-210ENST00000564409 KIF15Q9NS87 1388 aa23.37■■□□□ 1.33
SPG7-210ENST00000564409 DAPK1P53355 1430 aa23.36■■□□□ 1.33
SPG7-210ENST00000564409 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
SPG7-210ENST00000564409 THEMISQ8N1K5 641 aaPredicted RBP23.35■■□□□ 1.33
SPG7-210ENST00000564409 POLR1AO95602 1720 aaPredicted RBP23.34■■□□□ 1.33
SPG7-210ENST00000564409 SPATA31D1Q6ZQQ2 1576 aa23.33■■□□□ 1.33
SPG7-210ENST00000564409 PRDM15P57071 1507 aaPredicted RBP23.32■■□□□ 1.32
SPG7-210ENST00000564409 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
SPG7-210ENST00000564409 ANKRD30AQ9BXX3 1397 aa23.31■■□□□ 1.32
SPG7-210ENST00000564409 RRP7BPQ9NSQ0 103 aa23.31■■□□□ 1.32
SPG7-210ENST00000564409 CEP152O94986 1710 aa23.3■■□□□ 1.32
SPG7-210ENST00000564409 ANKLE2Q86XL3 938 aa23.29■■□□□ 1.32
SPG7-210ENST00000564409 ERVK-7P63135 1459 aa23.29■■□□□ 1.32
SPG7-210ENST00000564409 ARHGAP31Q2M1Z3 1444 aa23.28■■□□□ 1.32
SPG7-210ENST00000564409 DEPDC5O75140 1603 aa23.28■■□□□ 1.32
SPG7-210ENST00000564409 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
SPG7-210ENST00000564409 CFAP65Q6ZU64 1925 aaKnown RBP23.27■■□□□ 1.32
SPG7-210ENST00000564409 NEURL4Q96JN8 1562 aa23.26■■□□□ 1.31
SPG7-210ENST00000564409 KANK1Q14678 1352 aa23.26■■□□□ 1.31
SPG7-210ENST00000564409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
SPG7-210ENST00000564409 MED14O60244 1454 aa23.24■■□□□ 1.31
SPG7-210ENST00000564409 ADGRL2O95490 1459 aa23.23■■□□□ 1.31
SPG7-210ENST00000564409 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
SPG7-210ENST00000564409 CPS1P31327 1500 aa23.19■■□□□ 1.3
SPG7-210ENST00000564409 LMTK2Q8IWU2 1503 aa23.19■■□□□ 1.3
SPG7-210ENST00000564409 FAM50AQ14320 339 aaKnown RBP23.19■■□□□ 1.3
SPG7-210ENST00000564409 UBR1Q8IWV7 1749 aa23.19■■□□□ 1.3
SPG7-210ENST00000564409 NPHP4O75161 1426 aaPredicted RBP23.18■■□□□ 1.3
SPG7-210ENST00000564409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.34e-12■□□□□ 11.3
SPG7-210ENST00000564409 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
SPG7-210ENST00000564409 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
SPG7-210ENST00000564409 KDM5AP29375 1690 aaKnown RBP23.13■■□□□ 1.29
SPG7-210ENST00000564409 ANKRD50Q9ULJ7 1429 aa23.12■■□□□ 1.29
SPG7-210ENST00000564409 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
SPG7-210ENST00000564409 SLIT1O75093 1534 aa23.11■■□□□ 1.29
SPG7-210ENST00000564409 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
SPG7-210ENST00000564409 SCAF11Q99590 1463 aaKnown RBP23.1■■□□□ 1.29
SPG7-210ENST00000564409 EFCAB6Q5THR3 1501 aa23.09■■□□□ 1.29
SPG7-210ENST00000564409 RPRD2Q5VT52 1461 aaKnown RBP23.07■■□□□ 1.28
SPG7-210ENST00000564409 ROCK1Q13464 1354 aa23.07■■□□□ 1.28
SPG7-210ENST00000564409 EID1Q9Y6B2 187 aa23.07■■□□□ 1.28
SPG7-210ENST00000564409 PIK3C2BO00750 1634 aa23.07■■□□□ 1.28
SPG7-210ENST00000564409 TXNDC2Q86VQ3 553 aa23.05■■□□□ 1.28
SPG7-210ENST00000564409 STAG3Q9UJ98 1225 aa23.05■■□□□ 1.28
SPG7-210ENST00000564409 NOS1P29475 1434 aa23.05■■□□□ 1.28
SPG7-210ENST00000564409 TOM1O60784 492 aa23.04■■□□□ 1.28
SPG7-210ENST00000564409 SLC52A1Q9NWF4 448 aa23.04■■□□□ 1.28
SPG7-210ENST00000564409 TET3O43151 1660 aa23.03■■□□□ 1.28
SPG7-210ENST00000564409 TMEM2Q9UHN6 1383 aa23.02■■□□□ 1.28
SPG7-210ENST00000564409 IDI1Q13907 227 aa23.02■■□□□ 1.28
SPG7-210ENST00000564409 SYNMO15061 1565 aa23.01■■□□□ 1.27
SPG7-210ENST00000564409 LTKP29376 864 aa23.01■■□□□ 1.27
SPG7-210ENST00000564409 UNC13BO14795 1591 aa23■■□□□ 1.27
SPG7-210ENST00000564409 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
SPG7-210ENST00000564409 STRCP1A6NGW2 1772 aa22.98■■□□□ 1.27
SPG7-210ENST00000564409 ADGRB3O60242 1522 aa22.97■■□□□ 1.27
SPG7-210ENST00000564409 DISP3Q9P2K9 1392 aa22.96■■□□□ 1.27
SPG7-210ENST00000564409 LRRC7Q96NW7 1537 aa22.95■■□□□ 1.26
SPG7-210ENST00000564409 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
SPG7-210ENST00000564409 HDGFP51858 240 aaKnown RBP22.91■■□□□ 1.26
SPG7-210ENST00000564409 SCAF1Q9H7N4 1312 aaKnown RBP22.89■■□□□ 1.26
SPG7-210ENST00000564409 PIP4K2BP78356 416 aa22.89■■□□□ 1.25
SPG7-210ENST00000564409 E9PCH4 1651 aa22.88■■□□□ 1.25
SPG7-210ENST00000564409 ILDR2Q71H61 639 aa22.87■■□□□ 1.25
SPG7-210ENST00000564409 ITGAEP38570 1179 aa22.86■■□□□ 1.25
SPG7-210ENST00000564409 MYO5BQ9ULV0 1848 aa22.86■■□□□ 1.25
SPG7-210ENST00000564409 NUP155O75694 1391 aa22.86■■□□□ 1.25
SPG7-210ENST00000564409 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
SPG7-210ENST00000564409 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
SPG7-210ENST00000564409 RRBP1Q9P2E9 1410 aaKnown RBP22.84■■□□□ 1.25
SPG7-210ENST00000564409 KCNA6P17658 529 aa22.84■■□□□ 1.25
SPG7-210ENST00000564409 HSPA1LP34931 641 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms