RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.03■■■□□ 2.08
PKD1-227ENST00000564313 LTBP4Q8N2S1 1624 aa28.01■■■□□ 2.07
PKD1-227ENST00000564313 RRBP1Q9P2E9 1410 aaKnown RBP27.97■■■□□ 2.07
PKD1-227ENST00000564313 DUOX2Q9NRD8 1548 aa27.97■■■□□ 2.07
PKD1-227ENST00000564313 ANKRD30AQ9BXX3 1397 aa27.96■■■□□ 2.07
PKD1-227ENST00000564313 EIF2AK4Q9P2K8 1649 aaKnown RBP27.94■■■□□ 2.06
PKD1-227ENST00000564313 ESF1Q9H501 851 aaKnown RBP27.94■■■□□ 2.06
PKD1-227ENST00000564313 PPP6R1Q9UPN7 881 aa27.94■■■□□ 2.06
PKD1-227ENST00000564313 ADGRL2O95490 1459 aa27.94■■■□□ 2.06
PKD1-227ENST00000564313 IQSEC2Q5JU85 1478 aa27.94■■■□□ 2.06
PKD1-227ENST00000564313 C3P01024 1663 aa27.94■■■□□ 2.06
PKD1-227ENST00000564313 CNTLNQ9NXG0 1405 aa27.93■■■□□ 2.06
PKD1-227ENST00000564313 KIF15Q9NS87 1388 aa27.93■■■□□ 2.06
PKD1-227ENST00000564313 FAM135AQ9P2D6 1515 aa27.9■■■□□ 2.06
PKD1-227ENST00000564313 NCOA1Q15788 1441 aa27.9■■■□□ 2.06
PKD1-227ENST00000564313 ERBINQ96RT1 1412 aa27.9■■■□□ 2.06
PKD1-227ENST00000564313 KIF3BO15066 747 aa27.89■■■□□ 2.06
PKD1-227ENST00000564313 GGT6Q6P531 493 aa27.88■■■□□ 2.05
PKD1-227ENST00000564313 CHIC2Q9UKJ5 165 aa27.88■■■□□ 2.05
PKD1-227ENST00000564313 RNF17Q9BXT8 1623 aaKnown RBP27.86■■■□□ 2.05
PKD1-227ENST00000564313 RRP7BPQ9NSQ0 103 aa27.86■■■□□ 2.05
PKD1-227ENST00000564313 MROH2AA6NES4 1674 aa27.86■■■□□ 2.05
PKD1-227ENST00000564313 ROCK1Q13464 1354 aa27.85■■■□□ 2.05
PKD1-227ENST00000564313 PTPRKQ15262 1439 aa27.82■■■□□ 2.04
PKD1-227ENST00000564313 KDM5DQ9BY66 1539 aa27.8■■■□□ 2.04
PKD1-227ENST00000564313 CLTCQ00610 1675 aaKnown RBP27.8■■■□□ 2.04
PKD1-227ENST00000564313 ZMYM3Q14202 1370 aa27.77■■■□□ 2.04
PKD1-227ENST00000564313 ZC3H13Q5T200 1668 aaKnown RBP27.77■■■□□ 2.04
PKD1-227ENST00000564313 UBAP1LF5GYI3 381 aa27.76■■■□□ 2.03
PKD1-227ENST00000564313 CAMSAP1Q5T5Y3 1602 aa27.76■■■□□ 2.03
PKD1-227ENST00000564313 ITGAEP38570 1179 aa27.75■■■□□ 2.03
PKD1-227ENST00000564313 ANKRD50Q9ULJ7 1429 aa27.75■■■□□ 2.03
PKD1-227ENST00000564313 PRDM15P57071 1507 aaPredicted RBP27.74■■■□□ 2.03
PKD1-227ENST00000564313 DEPDC5O75140 1603 aa27.74■■■□□ 2.03
PKD1-227ENST00000564313 ZNF335Q9H4Z2 1342 aaPredicted RBP27.73■■■□□ 2.03
PKD1-227ENST00000564313 WASHC2CQ9Y4E1 1318 aa27.73■■■□□ 2.03
PKD1-227ENST00000564313 MROH1Q8NDA8 1641 aa27.73■■■□□ 2.03
PKD1-227ENST00000564313 NCKAP5LQ9HCH0 1330 aa27.71■■■□□ 2.03
PKD1-227ENST00000564313 NPATQ14207 1427 aa27.7■■■□□ 2.03
PKD1-227ENST00000564313 ABCC3O15438 1527 aa27.68■■■□□ 2.02
PKD1-227ENST00000564313 KANK1Q14678 1352 aa27.68■■■□□ 2.02
PKD1-227ENST00000564313 PZPP20742 1482 aa27.64■■■□□ 2.01
PKD1-227ENST00000564313 CEP152O94986 1710 aa27.62■■■□□ 2.01
PKD1-227ENST00000564313 VWDEQ8N2E2 1590 aa27.61■■■□□ 2.01
PKD1-227ENST00000564313 GCC2Q8IWJ2 1684 aa27.6■■■□□ 2.01
PKD1-227ENST00000564313 UNC13BO14795 1591 aa27.6■■■□□ 2.01
PKD1-227ENST00000564313 LMTK2Q8IWU2 1503 aa27.59■■■□□ 2.01
PKD1-227ENST00000564313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.59■■■□□ 2.01
PKD1-227ENST00000564313 PKD2Q13563 968 aa27.57■■■□□ 2
PKD1-227ENST00000564313 HFM1A2PYH4 1435 aa27.57■■■□□ 2
PKD1-227ENST00000564313 ARHGAP31Q2M1Z3 1444 aa27.57■■■□□ 2
PKD1-227ENST00000564313 PLA2R1Q13018 1463 aa27.57■■■□□ 2
PKD1-227ENST00000564313 FBXO31Q5XUX0 539 aaPredicted RBP27.55■■■□□ 2
PKD1-227ENST00000564313 NAIPQ13075 1403 aa27.55■■■□□ 2
PKD1-227ENST00000564313 MED1Q15648 1581 aaPredicted RBP27.55■■■□□ 2
PKD1-227ENST00000564313 ZNF142P52746 1687 aaPredicted RBP27.54■■■□□ 2
PKD1-227ENST00000564313 MYO3AQ8NEV4 1616 aa27.53■■■□□ 2
PKD1-227ENST00000564313 HSPA1LP34931 641 aa27.53■■■□□ 2
PKD1-227ENST00000564313 CEP170BQ9Y4F5 1589 aaPredicted RBP27.5■■□□□ 1.99
PKD1-227ENST00000564313 TNRQ92752 1358 aa27.49■■□□□ 1.99
PKD1-227ENST00000564313 EFCAB6Q5THR3 1501 aa27.49■■□□□ 1.99
PKD1-227ENST00000564313 IQGAP3Q86VI3 1631 aa27.49■■□□□ 1.99
PKD1-227ENST00000564313 SCAF1Q9H7N4 1312 aaKnown RBP27.48■■□□□ 1.99
PKD1-227ENST00000564313 ERVK-7P63135 1459 aa27.48■■□□□ 1.99
PKD1-227ENST00000564313 TET3O43151 1660 aa27.48■■□□□ 1.99
PKD1-227ENST00000564313 PIP4K2BP78356 416 aa27.47■■□□□ 1.99
PKD1-227ENST00000564313 RPRD2Q5VT52 1461 aaKnown RBP27.45■■□□□ 1.99
PKD1-227ENST00000564313 NLRP1Q9C000 1473 aa27.44■■□□□ 1.98
PKD1-227ENST00000564313 NUP155O75694 1391 aa27.44■■□□□ 1.98
PKD1-227ENST00000564313 A2ML1A8K2U0 1454 aa27.43■■□□□ 1.98
PKD1-227ENST00000564313 CFAP65Q6ZU64 1925 aaKnown RBP27.41■■□□□ 1.98
PKD1-227ENST00000564313 TOM1O60784 492 aa27.4■■□□□ 1.98
PKD1-227ENST00000564313 ACIN1Q9UKV3 1341 aaKnown RBP27.4■■□□□ 1.98
PKD1-227ENST00000564313 CPS1P31327 1500 aa27.35■■□□□ 1.97
PKD1-227ENST00000564313 NOS1P29475 1434 aa27.34■■□□□ 1.97
PKD1-227ENST00000564313 PHF23Q9BUL5 403 aaPredicted RBP27.34■■□□□ 1.97
PKD1-227ENST00000564313 E9PCH4 1651 aa27.33■■□□□ 1.97
PKD1-227ENST00000564313 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.96
PKD1-227ENST00000564313 UGGT1Q9NYU2 1555 aa27.32■■□□□ 1.96
PKD1-227ENST00000564313 NEURL4Q96JN8 1562 aa27.3■■□□□ 1.96
PKD1-227ENST00000564313 TRIM52Q96A61 297 aa27.29■■□□□ 1.96
PKD1-227ENST00000564313 SYNMO15061 1565 aa27.29■■□□□ 1.96
PKD1-227ENST00000564313 POLR1AO95602 1720 aaPredicted RBP27.28■■□□□ 1.96
PKD1-227ENST00000564313 THEMISQ8N1K5 641 aaPredicted RBP27.27■■□□□ 1.96
PKD1-227ENST00000564313 SLC52A1Q9NWF4 448 aa27.27■■□□□ 1.96
PKD1-227ENST00000564313 KDM5AP29375 1690 aaKnown RBP27.26■■□□□ 1.95
PKD1-227ENST00000564313 ALKQ9UM73 1620 aa27.25■■□□□ 1.95
PKD1-227ENST00000564313 UBR1Q8IWV7 1749 aa27.24■■□□□ 1.95
PKD1-227ENST00000564313 PIK3C2BO00750 1634 aa27.23■■□□□ 1.95
PKD1-227ENST00000564313 SPHKAPQ2M3C7 1700 aa27.2■■□□□ 1.94
PKD1-227ENST00000564313 SLC4A1APQ9BWU0 796 aaKnown RBP27.2■■□□□ 1.94
PKD1-227ENST00000564313 RAB3GAP2Q9H2M9 1393 aa27.2■■□□□ 1.94
PKD1-227ENST00000564313 IDI1Q13907 227 aa27.19■■□□□ 1.94
PKD1-227ENST00000564313 STAG3Q9UJ98 1225 aa27.18■■□□□ 1.94
PKD1-227ENST00000564313 ADGRB3O60242 1522 aa27.17■■□□□ 1.94
PKD1-227ENST00000564313 HRCP23327 699 aa27.17■■□□□ 1.94
PKD1-227ENST00000564313 ANKLE2Q86XL3 938 aa27.17■■□□□ 1.94
PKD1-227ENST00000564313 SENP3Q9H4L4 574 aaPredicted RBP27.17■■□□□ 1.94
PKD1-227ENST00000564313 SLIT1O75093 1534 aa27.14■■□□□ 1.94
PKD1-227ENST00000564313 TRPM2O94759 1503 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms