RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 UBAP1LF5GYI3 381 aa17.24■□□□□ 0.35
CFDP1-203ENST00000564286 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
CFDP1-203ENST00000564286 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
CFDP1-203ENST00000564286 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
CFDP1-203ENST00000564286 SPATA31D1Q6ZQQ2 1576 aa17.21■□□□□ 0.35
CFDP1-203ENST00000564286 PLA2R1Q13018 1463 aa17.21■□□□□ 0.35
CFDP1-203ENST00000564286 CLTCQ00610 1675 aaKnown RBP17.2■□□□□ 0.34
CFDP1-203ENST00000564286 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
CFDP1-203ENST00000564286 PLXNC1O60486 1568 aa17.19■□□□□ 0.34
CFDP1-203ENST00000564286 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
CFDP1-203ENST00000564286 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
CFDP1-203ENST00000564286 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
CFDP1-203ENST00000564286 DHX29Q7Z478 1369 aaKnown RBP17.15■□□□□ 0.34
CFDP1-203ENST00000564286 RTEL1-TNFRSF6BF6WH68 1400 aa17.15■□□□□ 0.34
CFDP1-203ENST00000564286 TCOF1Q13428 1488 aaKnown RBP17.15■□□□□ 0.34
CFDP1-203ENST00000564286 KIF3BO15066 747 aa17.14■□□□□ 0.33
CFDP1-203ENST00000564286 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
CFDP1-203ENST00000564286 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
CFDP1-203ENST00000564286 A2ML1A8K2U0 1454 aa17.13■□□□□ 0.33
CFDP1-203ENST00000564286 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
CFDP1-203ENST00000564286 WASHC2CQ9Y4E1 1318 aa17.13■□□□□ 0.33
CFDP1-203ENST00000564286 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
CFDP1-203ENST00000564286 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
CFDP1-203ENST00000564286 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
CFDP1-203ENST00000564286 TNRQ92752 1358 aa17.11■□□□□ 0.33
CFDP1-203ENST00000564286 CEP162Q5TB80 1403 aa17.11■□□□□ 0.33
CFDP1-203ENST00000564286 TOM1O60784 492 aa17.1■□□□□ 0.33
CFDP1-203ENST00000564286 FBXO31Q5XUX0 539 aaPredicted RBP17.1■□□□□ 0.33
CFDP1-203ENST00000564286 ANKLE2Q86XL3 938 aa17.1■□□□□ 0.33
CFDP1-203ENST00000564286 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
CFDP1-203ENST00000564286 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
CFDP1-203ENST00000564286 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
CFDP1-203ENST00000564286 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
CFDP1-203ENST00000564286 THEMISQ8N1K5 641 aaPredicted RBP17.09■□□□□ 0.33
CFDP1-203ENST00000564286 CCDC141Q6ZP82 1450 aa17.07■□□□□ 0.32
CFDP1-203ENST00000564286 DNMT1P26358 1616 aaKnown RBP17.07■□□□□ 0.32
CFDP1-203ENST00000564286 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
CFDP1-203ENST00000564286 PZPP20742 1482 aa17.05■□□□□ 0.32
CFDP1-203ENST00000564286 CPS1P31327 1500 aa17.04■□□□□ 0.32
CFDP1-203ENST00000564286 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
CFDP1-203ENST00000564286 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
CFDP1-203ENST00000564286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.03■□□□□ 0.32
CFDP1-203ENST00000564286 HSPA1LP34931 641 aa17.03■□□□□ 0.32
CFDP1-203ENST00000564286 CAMSAP2Q08AD1 1489 aa17.03■□□□□ 0.32
CFDP1-203ENST00000564286 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
CFDP1-203ENST00000564286 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
CFDP1-203ENST00000564286 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
CFDP1-203ENST00000564286 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
CFDP1-203ENST00000564286 NPHP4O75161 1426 aaPredicted RBP16.98■□□□□ 0.31
CFDP1-203ENST00000564286 POLR1AO95602 1720 aaPredicted RBP16.96■□□□□ 0.31
CFDP1-203ENST00000564286 NEURL4Q96JN8 1562 aa16.96■□□□□ 0.31
CFDP1-203ENST00000564286 ARHGEF5Q12774 1597 aa16.94■□□□□ 0.3
CFDP1-203ENST00000564286 MED14O60244 1454 aa16.94■□□□□ 0.3
CFDP1-203ENST00000564286 ZBTB22O15209 634 aa16.93■□□□□ 0.3
CFDP1-203ENST00000564286 CAPN15O75808 1086 aa16.93■□□□□ 0.3
CFDP1-203ENST00000564286 DEPDC5O75140 1603 aa16.92■□□□□ 0.3
CFDP1-203ENST00000564286 VWDEQ8N2E2 1590 aa16.91■□□□□ 0.3
CFDP1-203ENST00000564286 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
CFDP1-203ENST00000564286 MED1Q15648 1581 aaPredicted RBP16.9■□□□□ 0.3
CFDP1-203ENST00000564286 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
CFDP1-203ENST00000564286 DSG3P32926 999 aa16.89■□□□□ 0.29
CFDP1-203ENST00000564286 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
CFDP1-203ENST00000564286 ABCC3O15438 1527 aa16.88■□□□□ 0.29
CFDP1-203ENST00000564286 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
CFDP1-203ENST00000564286 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
CFDP1-203ENST00000564286 RNF17Q9BXT8 1623 aaKnown RBP16.86■□□□□ 0.29
CFDP1-203ENST00000564286 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
CFDP1-203ENST00000564286 TXNDC2Q86VQ3 553 aa16.86■□□□□ 0.29
CFDP1-203ENST00000564286 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
CFDP1-203ENST00000564286 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
CFDP1-203ENST00000564286 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
CFDP1-203ENST00000564286 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
CFDP1-203ENST00000564286 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
CFDP1-203ENST00000564286 LRRC7Q96NW7 1537 aa16.84■□□□□ 0.29
CFDP1-203ENST00000564286 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
CFDP1-203ENST00000564286 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
CFDP1-203ENST00000564286 EIF2AK4Q9P2K8 1649 aaKnown RBP16.83■□□□□ 0.28
CFDP1-203ENST00000564286 DUOX2Q9NRD8 1548 aa16.82■□□□□ 0.28
CFDP1-203ENST00000564286 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
CFDP1-203ENST00000564286 APLP2Q06481 763 aa16.81■□□□□ 0.28
CFDP1-203ENST00000564286 RRP7BPQ9NSQ0 103 aa16.81■□□□□ 0.28
CFDP1-203ENST00000564286 KANK1Q14678 1352 aa16.8■□□□□ 0.28
CFDP1-203ENST00000564286 KIF15Q9NS87 1388 aa16.8■□□□□ 0.28
CFDP1-203ENST00000564286 LTKP29376 864 aa16.8■□□□□ 0.28
CFDP1-203ENST00000564286 SYNMO15061 1565 aa16.8■□□□□ 0.28
CFDP1-203ENST00000564286 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
CFDP1-203ENST00000564286 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
CFDP1-203ENST00000564286 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
CFDP1-203ENST00000564286 ALKQ9UM73 1620 aa16.78■□□□□ 0.28
CFDP1-203ENST00000564286 ERBINQ96RT1 1412 aa16.77■□□□□ 0.27
CFDP1-203ENST00000564286 MROH1Q8NDA8 1641 aa16.76■□□□□ 0.27
CFDP1-203ENST00000564286 UBR1Q8IWV7 1749 aa16.76■□□□□ 0.27
CFDP1-203ENST00000564286 SLIT1O75093 1534 aa16.75■□□□□ 0.27
CFDP1-203ENST00000564286 ARHGAP23Q9P227 1491 aa16.75■□□□□ 0.27
CFDP1-203ENST00000564286 CEP152O94986 1710 aa16.74■□□□□ 0.27
CFDP1-203ENST00000564286 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
CFDP1-203ENST00000564286 STRCP1A6NGW2 1772 aa16.74■□□□□ 0.27
CFDP1-203ENST00000564286 ABCC5O15440 1437 aa16.72■□□□□ 0.27
CFDP1-203ENST00000564286 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
CFDP1-203ENST00000564286 BCANQ96GW7 911 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms