RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 EIF2AK4Q9P2K8 1649 aaKnown RBP24.7■■□□□ 1.54
SPSB3-205ENST00000564070 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
SPSB3-205ENST00000564070 KIF3BO15066 747 aa24.69■■□□□ 1.54
SPSB3-205ENST00000564070 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
SPSB3-205ENST00000564070 FAM135AQ9P2D6 1515 aa24.69■■□□□ 1.54
SPSB3-205ENST00000564070 ZMYM3Q14202 1370 aa24.67■■□□□ 1.54
SPSB3-205ENST00000564070 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
SPSB3-205ENST00000564070 RNF17Q9BXT8 1623 aaKnown RBP24.66■■□□□ 1.54
SPSB3-205ENST00000564070 ANKRD30AQ9BXX3 1397 aa24.65■■□□□ 1.54
SPSB3-205ENST00000564070 ADGRL2O95490 1459 aa24.64■■□□□ 1.54
SPSB3-205ENST00000564070 ERBINQ96RT1 1412 aa24.64■■□□□ 1.54
SPSB3-205ENST00000564070 KDM5DQ9BY66 1539 aa24.64■■□□□ 1.53
SPSB3-205ENST00000564070 RRP7BPQ9NSQ0 103 aa24.62■■□□□ 1.53
SPSB3-205ENST00000564070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.62■■□□□ 1.531e-6■■■■□ 25.8
SPSB3-205ENST00000564070 NCOA1Q15788 1441 aa24.61■■□□□ 1.53
SPSB3-205ENST00000564070 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
SPSB3-205ENST00000564070 DMRT2Q9Y5R5 561 aa24.61■■□□□ 1.53
SPSB3-205ENST00000564070 NPATQ14207 1427 aa24.6■■□□□ 1.53
SPSB3-205ENST00000564070 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
SPSB3-205ENST00000564070 ZC3H13Q5T200 1668 aaKnown RBP24.57■■□□□ 1.52
SPSB3-205ENST00000564070 WASHC2CQ9Y4E1 1318 aa24.57■■□□□ 1.52
SPSB3-205ENST00000564070 PTPRKQ15262 1439 aa24.55■■□□□ 1.52
SPSB3-205ENST00000564070 RRBP1Q9P2E9 1410 aaKnown RBP24.55■■□□□ 1.52
SPSB3-205ENST00000564070 PTPRTO14522 1441 aa24.54■■□□□ 1.52
SPSB3-205ENST00000564070 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
SPSB3-205ENST00000564070 ABCC3O15438 1527 aa24.53■■□□□ 1.52
SPSB3-205ENST00000564070 DEPDC5O75140 1603 aa24.53■■□□□ 1.52
SPSB3-205ENST00000564070 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
SPSB3-205ENST00000564070 NCKAP5LQ9HCH0 1330 aa24.52■■□□□ 1.52
SPSB3-205ENST00000564070 PZPP20742 1482 aa24.51■■□□□ 1.51
SPSB3-205ENST00000564070 ROCK1Q13464 1354 aa24.51■■□□□ 1.51
SPSB3-205ENST00000564070 MYO3AQ8NEV4 1616 aa24.48■■□□□ 1.51
SPSB3-205ENST00000564070 ANKRD50Q9ULJ7 1429 aa24.47■■□□□ 1.51
SPSB3-205ENST00000564070 CEP152O94986 1710 aa24.47■■□□□ 1.51
SPSB3-205ENST00000564070 FBXO31Q5XUX0 539 aaPredicted RBP24.46■■□□□ 1.51
SPSB3-205ENST00000564070 LTBP4Q8N2S1 1624 aa24.45■■□□□ 1.5
SPSB3-205ENST00000564070 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
SPSB3-205ENST00000564070 KANK1Q14678 1352 aa24.43■■□□□ 1.5
SPSB3-205ENST00000564070 CEP170BQ9Y4F5 1589 aaPredicted RBP24.43■■□□□ 1.5
SPSB3-205ENST00000564070 ITGAEP38570 1179 aa24.43■■□□□ 1.5
SPSB3-205ENST00000564070 VWDEQ8N2E2 1590 aa24.42■■□□□ 1.5
SPSB3-205ENST00000564070 TNRQ92752 1358 aa24.41■■□□□ 1.5
SPSB3-205ENST00000564070 LMTK2Q8IWU2 1503 aa24.4■■□□□ 1.5
SPSB3-205ENST00000564070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.55e-8■■■■□ 25.6
SPSB3-205ENST00000564070 ARHGAP31Q2M1Z3 1444 aa24.39■■□□□ 1.5
SPSB3-205ENST00000564070 SPATA31D1Q6ZQQ2 1576 aa24.38■■□□□ 1.49
SPSB3-205ENST00000564070 ZNF335Q9H4Z2 1342 aaPredicted RBP24.37■■□□□ 1.49
SPSB3-205ENST00000564070 A2ML1A8K2U0 1454 aa24.36■■□□□ 1.49
SPSB3-205ENST00000564070 ERVK-7P63135 1459 aa24.36■■□□□ 1.49
SPSB3-205ENST00000564070 PLA2R1Q13018 1463 aa24.36■■□□□ 1.49
SPSB3-205ENST00000564070 UNC13BO14795 1591 aa24.36■■□□□ 1.49
SPSB3-205ENST00000564070 NLRP1Q9C000 1473 aa24.34■■□□□ 1.49
SPSB3-205ENST00000564070 PKD2Q13563 968 aa24.34■■□□□ 1.49
SPSB3-205ENST00000564070 EFCAB6Q5THR3 1501 aa24.32■■□□□ 1.48
SPSB3-205ENST00000564070 GCC2Q8IWJ2 1684 aa24.28■■□□□ 1.48
SPSB3-205ENST00000564070 TET3O43151 1660 aa24.27■■□□□ 1.48
SPSB3-205ENST00000564070 IQGAP3Q86VI3 1631 aa24.26■■□□□ 1.47
SPSB3-205ENST00000564070 NAIPQ13075 1403 aa24.26■■□□□ 1.47
SPSB3-205ENST00000564070 RPRD2Q5VT52 1461 aaKnown RBP24.25■■□□□ 1.47
SPSB3-205ENST00000564070 UGGT1Q9NYU2 1555 aa24.25■■□□□ 1.47
SPSB3-205ENST00000564070 HFM1A2PYH4 1435 aa24.24■■□□□ 1.47
SPSB3-205ENST00000564070 IQSEC2Q5JU85 1478 aa24.23■■□□□ 1.47
SPSB3-205ENST00000564070 NEURL4Q96JN8 1562 aa24.23■■□□□ 1.47
SPSB3-205ENST00000564070 CFAP65Q6ZU64 1925 aaKnown RBP24.22■■□□□ 1.47
SPSB3-205ENST00000564070 NOS1P29475 1434 aa24.2■■□□□ 1.46
SPSB3-205ENST00000564070 NUP155O75694 1391 aa24.2■■□□□ 1.46
SPSB3-205ENST00000564070 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-205ENST00000564070 SYNMO15061 1565 aa24.18■■□□□ 1.46
SPSB3-205ENST00000564070 UBAP1LF5GYI3 381 aa24.18■■□□□ 1.46
SPSB3-205ENST00000564070 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
SPSB3-205ENST00000564070 ANKLE2Q86XL3 938 aa24.17■■□□□ 1.46
SPSB3-205ENST00000564070 UBR1Q8IWV7 1749 aa24.17■■□□□ 1.46
SPSB3-205ENST00000564070 E9PCH4 1651 aa24.15■■□□□ 1.46
SPSB3-205ENST00000564070 PIK3C2BO00750 1634 aa24.14■■□□□ 1.46
SPSB3-205ENST00000564070 KDM5AP29375 1690 aaKnown RBP24.14■■□□□ 1.45
SPSB3-205ENST00000564070 DISP3Q9P2K9 1392 aa24.14■■□□□ 1.45
SPSB3-205ENST00000564070 ILDR2Q71H61 639 aa24.11■■□□□ 1.45
SPSB3-205ENST00000564070 NPHP4O75161 1426 aaPredicted RBP24.1■■□□□ 1.45
SPSB3-205ENST00000564070 SLC52A1Q9NWF4 448 aa24.1■■□□□ 1.45
SPSB3-205ENST00000564070 IDI1Q13907 227 aa24.09■■□□□ 1.45
SPSB3-205ENST00000564070 ADGRB3O60242 1522 aa24.08■■□□□ 1.45
SPSB3-205ENST00000564070 SLIT1O75093 1534 aa24.08■■□□□ 1.45
SPSB3-205ENST00000564070 MED14O60244 1454 aa24.07■■□□□ 1.44
SPSB3-205ENST00000564070 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
SPSB3-205ENST00000564070 STAG3Q9UJ98 1225 aa24.05■■□□□ 1.44
SPSB3-205ENST00000564070 PIP4K2BP78356 416 aa24.03■■□□□ 1.44
SPSB3-205ENST00000564070 CPS1P31327 1500 aa24.03■■□□□ 1.44
SPSB3-205ENST00000564070 IQGAP1P46940 1657 aa24.02■■□□□ 1.44
SPSB3-205ENST00000564070 SCAF11Q99590 1463 aaKnown RBP24.02■■□□□ 1.44
SPSB3-205ENST00000564070 TMEM2Q9UHN6 1383 aa24.02■■□□□ 1.44
SPSB3-205ENST00000564070 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
SPSB3-205ENST00000564070 LTKP29376 864 aa24.01■■□□□ 1.43
SPSB3-205ENST00000564070 TRIM52Q96A61 297 aa24.01■■□□□ 1.43
SPSB3-205ENST00000564070 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
SPSB3-205ENST00000564070 TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
SPSB3-205ENST00000564070 STRCP1A6NGW2 1772 aa23.98■■□□□ 1.43
SPSB3-205ENST00000564070 SETD5Q9C0A6 1442 aa23.97■■□□□ 1.43
SPSB3-205ENST00000564070 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
SPSB3-205ENST00000564070 EID1Q9Y6B2 187 aa23.97■■□□□ 1.43
SPSB3-205ENST00000564070 HSPA1LP34931 641 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms