RNA–Protein interactions for RNA: ENST00000563830.2

SNAP23-208, Transcript of synaptosome associated protein 23, humanhuman

TSL 5

Gene SNAP23, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-208ENST00000563830 PLSCR2Q9NRY7 297 aa10.5□□□□□ -0.73
SNAP23-208ENST00000563830 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
SNAP23-208ENST00000563830 CCDC102AQ96A19 550 aa10.48□□□□□ -0.73
SNAP23-208ENST00000563830 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
SNAP23-208ENST00000563830 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
SNAP23-208ENST00000563830 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
SNAP23-208ENST00000563830 OATP04181 439 aa10.46□□□□□ -0.73
SNAP23-208ENST00000563830 ARSIQ5FYB1 569 aa10.45□□□□□ -0.74
SNAP23-208ENST00000563830 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
SNAP23-208ENST00000563830 C6orf132Q5T0Z8 1188 aa10.45□□□□□ -0.74
SNAP23-208ENST00000563830 ZNF454Q8N9F8 522 aa10.45□□□□□ -0.74
SNAP23-208ENST00000563830 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
SNAP23-208ENST00000563830 KDM4CQ9H3R0 1056 aa10.45□□□□□ -0.74
SNAP23-208ENST00000563830 NUDT7P0C024 238 aa10.43□□□□□ -0.74
SNAP23-208ENST00000563830 HOXB1P14653 301 aaPredicted RBP10.43□□□□□ -0.74
SNAP23-208ENST00000563830 BCL2L12Q9HB09 334 aa10.42□□□□□ -0.74
SNAP23-208ENST00000563830 CLCN1P35523 988 aa10.41□□□□□ -0.74
SNAP23-208ENST00000563830 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
SNAP23-208ENST00000563830 RBM33Q96EV2 1170 aaKnown RBP10.41□□□□□ -0.74
SNAP23-208ENST00000563830 GOPCQ9HD26 462 aa10.4□□□□□ -0.74
SNAP23-208ENST00000563830 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
SNAP23-208ENST00000563830 FECHP22830 423 aa10.38□□□□□ -0.75
SNAP23-208ENST00000563830 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
SNAP23-208ENST00000563830 CDHR5Q9HBB8 845 aa10.38□□□□□ -0.75
SNAP23-208ENST00000563830 PTPREP23469 700 aa10.37□□□□□ -0.75
SNAP23-208ENST00000563830 PRSS12P56730 875 aa10.37□□□□□ -0.75
SNAP23-208ENST00000563830 PARP9Q8IXQ6 854 aa10.37□□□□□ -0.75
SNAP23-208ENST00000563830 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
SNAP23-208ENST00000563830 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
SNAP23-208ENST00000563830 LHX6Q9UPM6 363 aa10.37□□□□□ -0.75
SNAP23-208ENST00000563830 GPBP1L1Q9HC44 474 aaPredicted RBP10.36□□□□□ -0.75
SNAP23-208ENST00000563830 PPP1R3GB7ZBB8 358 aa10.35□□□□□ -0.75
SNAP23-208ENST00000563830 TTLL12Q14166 644 aaPredicted RBP10.35□□□□□ -0.75
SNAP23-208ENST00000563830 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
SNAP23-208ENST00000563830 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
SNAP23-208ENST00000563830 TMUB1Q9BVT8 246 aa10.34□□□□□ -0.75
SNAP23-208ENST00000563830 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
SNAP23-208ENST00000563830 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
SNAP23-208ENST00000563830 CDCA7LQ96GN5 454 aa10.32□□□□□ -0.76
SNAP23-208ENST00000563830 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
SNAP23-208ENST00000563830 PXYLP1Q8TE99 480 aa10.31□□□□□ -0.76
SNAP23-208ENST00000563830 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■□□□□ 9.1
SNAP23-208ENST00000563830 OTUD5Q96G74 571 aa10.31□□□□□ -0.76
SNAP23-208ENST00000563830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
SNAP23-208ENST00000563830 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
SNAP23-208ENST00000563830 DIXDC1Q155Q3 683 aa10.29□□□□□ -0.76
SNAP23-208ENST00000563830 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
SNAP23-208ENST00000563830 RSPH6AQ9H0K4 717 aa10.29□□□□□ -0.76
SNAP23-208ENST00000563830 PBX2P40425 430 aa10.28□□□□□ -0.76
SNAP23-208ENST00000563830 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
SNAP23-208ENST00000563830 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
SNAP23-208ENST00000563830 NBPF26B4DH59 902 aa10.27□□□□□ -0.77
SNAP23-208ENST00000563830 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
SNAP23-208ENST00000563830 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
SNAP23-208ENST00000563830 PLEKHG3A1L390 1219 aa10.24□□□□□ -0.77
SNAP23-208ENST00000563830 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
SNAP23-208ENST00000563830 EYA1Q99502 592 aa10.24□□□□□ -0.77
SNAP23-208ENST00000563830 SSTR3P32745 418 aaPredicted RBP10.23□□□□□ -0.77
SNAP23-208ENST00000563830 MDM2Q00987 491 aaPredicted RBP10.23□□□□□ -0.77
SNAP23-208ENST00000563830 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
SNAP23-208ENST00000563830 COL9A1P20849 921 aa10.22□□□□□ -0.77
SNAP23-208ENST00000563830 DNAJB2P25686 324 aa10.22□□□□□ -0.77
SNAP23-208ENST00000563830 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
SNAP23-208ENST00000563830 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
SNAP23-208ENST00000563830 ARHGAP33O14559 1287 aa10.21□□□□□ -0.77
SNAP23-208ENST00000563830 MS4A1P11836 297 aa10.2□□□□□ -0.78
SNAP23-208ENST00000563830 ERBB3P21860 1342 aa10.19□□□□□ -0.78
SNAP23-208ENST00000563830 RSPH4AQ5TD94 716 aa10.19□□□□□ -0.78
SNAP23-208ENST00000563830 TATDN2Q93075 761 aa10.19□□□□□ -0.78
SNAP23-208ENST00000563830 PCMTD1Q96MG8 357 aaPredicted RBP10.19□□□□□ -0.78
SNAP23-208ENST00000563830 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
SNAP23-208ENST00000563830 TSKSQ9UJT2 592 aa10.19□□□□□ -0.78
SNAP23-208ENST00000563830 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
SNAP23-208ENST00000563830 RABGEF1Q9UJ41 708 aa10.18□□□□□ -0.78
SNAP23-208ENST00000563830 RCCD1A6NED2 376 aa10.17□□□□□ -0.78
SNAP23-208ENST00000563830 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
SNAP23-208ENST00000563830 KCNK17Q96T54 332 aa10.17□□□□□ -0.78
SNAP23-208ENST00000563830 ZBED2Q9BTP6 218 aa10.17□□□□□ -0.78
SNAP23-208ENST00000563830 GJA5P36382 358 aa10.16□□□□□ -0.78
SNAP23-208ENST00000563830 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
SNAP23-208ENST00000563830 FLIIQ13045 1269 aa10.16□□□□□ -0.78
SNAP23-208ENST00000563830 BEGAINQ9BUH8 593 aa10.16□□□□□ -0.78
SNAP23-208ENST00000563830 TMEM134Q9H6X4 195 aa10.16□□□□□ -0.78
SNAP23-208ENST00000563830 NUDT18Q6ZVK8 323 aa10.15□□□□□ -0.78
SNAP23-208ENST00000563830 ZNF687Q8N1G0 1237 aa10.15□□□□□ -0.78
SNAP23-208ENST00000563830 FAM198AQ9UFP1 575 aa10.15□□□□□ -0.78
SNAP23-208ENST00000563830 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
SNAP23-208ENST00000563830 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
SNAP23-208ENST00000563830 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
SNAP23-208ENST00000563830 LAPTM4BQ86VI4 370 aa10.14□□□□□ -0.79
SNAP23-208ENST00000563830 TK2O00142 265 aa10.13□□□□□ -0.79
SNAP23-208ENST00000563830 ST18O60284 1047 aa10.13□□□□□ -0.79
SNAP23-208ENST00000563830 HDGFP51858 240 aaKnown RBP10.13□□□□□ -0.79
SNAP23-208ENST00000563830 EMP3P54852 163 aa10.13□□□□□ -0.79
SNAP23-208ENST00000563830 NECTIN2Q92692 538 aa10.13□□□□□ -0.79
SNAP23-208ENST00000563830 FAM161AQ3B820 660 aa10.12□□□□□ -0.79
SNAP23-208ENST00000563830 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
SNAP23-208ENST00000563830 CD46P15529 392 aa10.11□□□□□ -0.79
SNAP23-208ENST00000563830 USP46P62068 366 aa10.1□□□□□ -0.79
SNAP23-208ENST00000563830 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms