RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 A2MP01023 1474 aa28.7■■■□□ 2.18
SPSB3-204ENST00000563741 CCER1Q8TC90 406 aaPredicted RBP28.67■■■□□ 2.18
SPSB3-204ENST00000563741 DHX57Q6P158 1386 aaKnown RBP28.67■■■□□ 2.18
SPSB3-204ENST00000563741 ANKRD50Q9ULJ7 1429 aa28.67■■■□□ 2.18
SPSB3-204ENST00000563741 DHX29Q7Z478 1369 aaKnown RBP28.6■■■□□ 2.17
SPSB3-204ENST00000563741 DUOX2Q9NRD8 1548 aa28.6■■■□□ 2.17
SPSB3-204ENST00000563741 ESF1Q9H501 851 aaKnown RBP28.58■■■□□ 2.17
SPSB3-204ENST00000563741 PLPPR3Q6T4P5 718 aa28.56■■■□□ 2.16
SPSB3-204ENST00000563741 ERBINQ96RT1 1412 aa28.56■■■□□ 2.16
SPSB3-204ENST00000563741 CNTLNQ9NXG0 1405 aa28.53■■■□□ 2.16
SPSB3-204ENST00000563741 ACIN1Q9UKV3 1341 aaKnown RBP28.53■■■□□ 2.16
SPSB3-204ENST00000563741 GGT6Q6P531 493 aa28.51■■■□□ 2.15
SPSB3-204ENST00000563741 TRIM52Q96A61 297 aa28.49■■■□□ 2.15
SPSB3-204ENST00000563741 CEBPAP49715 358 aaPredicted RBP28.49■■■□□ 2.15
SPSB3-204ENST00000563741 PPP6R1Q9UPN7 881 aa28.49■■■□□ 2.15
SPSB3-204ENST00000563741 KIF3BO15066 747 aa28.48■■■□□ 2.15
SPSB3-204ENST00000563741 C3P01024 1663 aa28.47■■■□□ 2.15
SPSB3-204ENST00000563741 MROH2AA6NES4 1674 aa28.46■■■□□ 2.15
SPSB3-204ENST00000563741 CLSPNQ9HAW4 1339 aa28.45■■■□□ 2.14
SPSB3-204ENST00000563741 CLTCQ00610 1675 aaKnown RBP28.44■■■□□ 2.14
SPSB3-204ENST00000563741 UNC13BO14795 1591 aa28.44■■■□□ 2.14
SPSB3-204ENST00000563741 KDM5DQ9BY66 1539 aa28.44■■■□□ 2.14
SPSB3-204ENST00000563741 PZPP20742 1482 aa28.43■■■□□ 2.14
SPSB3-204ENST00000563741 SETD1BQ9UPS6 1966 aaKnown RBP28.42■■■□□ 2.14
SPSB3-204ENST00000563741 EIF2AK4Q9P2K8 1649 aaKnown RBP28.41■■■□□ 2.14
SPSB3-204ENST00000563741 ZMYM3Q14202 1370 aa28.4■■■□□ 2.14
SPSB3-204ENST00000563741 NUP155O75694 1391 aa28.4■■■□□ 2.14
SPSB3-204ENST00000563741 LMTK3Q96Q04 1460 aa28.39■■■□□ 2.14
SPSB3-204ENST00000563741 MPHOSPH9Q99550 1183 aa28.39■■■□□ 2.14
SPSB3-204ENST00000563741 PREX1Q8TCU6 1659 aa28.37■■■□□ 2.13
SPSB3-204ENST00000563741 FAM135AQ9P2D6 1515 aa28.36■■■□□ 2.13
SPSB3-204ENST00000563741 RNF17Q9BXT8 1623 aaKnown RBP28.36■■■□□ 2.13
SPSB3-204ENST00000563741 DEPDC5O75140 1603 aa28.35■■■□□ 2.13
SPSB3-204ENST00000563741 ZEB1P37275 1124 aaPredicted RBP28.35■■■□□ 2.13
SPSB3-204ENST00000563741 SLC4A1APQ9BWU0 796 aaKnown RBP28.34■■■□□ 2.13
SPSB3-204ENST00000563741 WASHC2CQ9Y4E1 1318 aa28.31■■■□□ 2.12
SPSB3-204ENST00000563741 NPATQ14207 1427 aa28.31■■■□□ 2.12
SPSB3-204ENST00000563741 IQGAP3Q86VI3 1631 aa28.31■■■□□ 2.12
SPSB3-204ENST00000563741 MROH1Q8NDA8 1641 aa28.3■■■□□ 2.12
SPSB3-204ENST00000563741 PRDM15P57071 1507 aaPredicted RBP28.3■■■□□ 2.12
SPSB3-204ENST00000563741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.29■■■□□ 2.121e-6■■■□□ 17.1
SPSB3-204ENST00000563741 UHRF1BP1Q6BDS2 1440 aa28.29■■■□□ 2.12
SPSB3-204ENST00000563741 VWDEQ8N2E2 1590 aa28.25■■■□□ 2.11
SPSB3-204ENST00000563741 HSPA2P54652 639 aa28.25■■■□□ 2.11
SPSB3-204ENST00000563741 ZC3H13Q5T200 1668 aaKnown RBP28.24■■■□□ 2.11
SPSB3-204ENST00000563741 FOXD1Q16676 465 aa28.24■■■□□ 2.11
SPSB3-204ENST00000563741 PKD2Q13563 968 aa28.23■■■□□ 2.11
SPSB3-204ENST00000563741 ABCC3O15438 1527 aa28.22■■■□□ 2.11
SPSB3-204ENST00000563741 ANKRD30BQ9BXX2 1392 aa28.2■■■□□ 2.1
SPSB3-204ENST00000563741 KANK1Q14678 1352 aa28.19■■■□□ 2.1
SPSB3-204ENST00000563741 CEP152O94986 1710 aa28.18■■■□□ 2.1
SPSB3-204ENST00000563741 SIN3AQ96ST3 1273 aa28.18■■■□□ 2.1
SPSB3-204ENST00000563741 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
SPSB3-204ENST00000563741 MYO3AQ8NEV4 1616 aa28.14■■■□□ 2.1
SPSB3-204ENST00000563741 LMTK2Q8IWU2 1503 aa28.14■■■□□ 2.09
SPSB3-204ENST00000563741 CAMSAP1Q5T5Y3 1602 aa28.13■■■□□ 2.09
SPSB3-204ENST00000563741 TET3O43151 1660 aa28.13■■■□□ 2.09
SPSB3-204ENST00000563741 TNRQ92752 1358 aa28.11■■■□□ 2.09
SPSB3-204ENST00000563741 ZNF142P52746 1687 aaPredicted RBP28.11■■■□□ 2.09
SPSB3-204ENST00000563741 NEUROD1Q13562 356 aa28.1■■■□□ 2.09
SPSB3-204ENST00000563741 CEP170BQ9Y4F5 1589 aaPredicted RBP28.08■■■□□ 2.09
SPSB3-204ENST00000563741 EFCAB6Q5THR3 1501 aa28.08■■■□□ 2.09
SPSB3-204ENST00000563741 CFAP65Q6ZU64 1925 aaKnown RBP28.08■■■□□ 2.09
SPSB3-204ENST00000563741 E9PCH4 1651 aa28.07■■■□□ 2.08
SPSB3-204ENST00000563741 ARHGAP31Q2M1Z3 1444 aa28.06■■■□□ 2.08
SPSB3-204ENST00000563741 STRCQ7RTU9 1775 aa28.05■■■□□ 2.08
SPSB3-204ENST00000563741 A2ML1A8K2U0 1454 aa28.05■■■□□ 2.08
SPSB3-204ENST00000563741 PLA2R1Q13018 1463 aa28.05■■■□□ 2.08
SPSB3-204ENST00000563741 RPRD2Q5VT52 1461 aaKnown RBP28.05■■■□□ 2.08
SPSB3-204ENST00000563741 SPATA31D1Q6ZQQ2 1576 aa28.04■■■□□ 2.08
SPSB3-204ENST00000563741 ERVK-7P63135 1459 aa28.03■■■□□ 2.08
SPSB3-204ENST00000563741 NLRP1Q9C000 1473 aa28.01■■■□□ 2.07
SPSB3-204ENST00000563741 TIMELESSQ9UNS1 1208 aa27.99■■■□□ 2.07
SPSB3-204ENST00000563741 DMRT2Q9Y5R5 561 aa27.98■■■□□ 2.07
SPSB3-204ENST00000563741 PTPRTO14522 1441 aa27.98■■■□□ 2.07
SPSB3-204ENST00000563741 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
SPSB3-204ENST00000563741 TRPM2O94759 1503 aa27.96■■■□□ 2.07
SPSB3-204ENST00000563741 CCDC144AA2RUR9 1427 aa27.95■■■□□ 2.07
SPSB3-204ENST00000563741 SPHKAPQ2M3C7 1700 aa27.94■■■□□ 2.06
SPSB3-204ENST00000563741 UGGT1Q9NYU2 1555 aa27.91■■■□□ 2.06
SPSB3-204ENST00000563741 THEMISQ8N1K5 641 aaPredicted RBP27.9■■■□□ 2.06
SPSB3-204ENST00000563741 NCKAP5LQ9HCH0 1330 aa27.88■■■□□ 2.05
SPSB3-204ENST00000563741 NOS1P29475 1434 aa27.85■■■□□ 2.05
SPSB3-204ENST00000563741 CLTCL1P53675 1640 aa27.85■■■□□ 2.05
SPSB3-204ENST00000563741 L3MBTL2Q969R5 705 aa27.84■■■□□ 2.05
SPSB3-204ENST00000563741 UBR1Q8IWV7 1749 aa27.83■■■□□ 2.05
SPSB3-204ENST00000563741 SYNMO15061 1565 aa27.82■■■□□ 2.04
SPSB3-204ENST00000563741 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
SPSB3-204ENST00000563741 PPP1R15AO75807 674 aaPredicted RBP27.81■■■□□ 2.04
SPSB3-204ENST00000563741 ANKLE2Q86XL3 938 aa27.8■■■□□ 2.04
SPSB3-204ENST00000563741 PIK3C2BO00750 1634 aa27.8■■■□□ 2.04
SPSB3-204ENST00000563741 IDI1Q13907 227 aa27.78■■■□□ 2.04
SPSB3-204ENST00000563741 SPATA31E1Q6ZUB1 1445 aa27.78■■■□□ 2.04
SPSB3-204ENST00000563741 SLC52A1Q9NWF4 448 aa27.77■■■□□ 2.04
SPSB3-204ENST00000563741 KDM5AP29375 1690 aaKnown RBP27.76■■■□□ 2.03
SPSB3-204ENST00000563741 STAG3Q9UJ98 1225 aa27.75■■■□□ 2.03
SPSB3-204ENST00000563741 NEURL4Q96JN8 1562 aa27.74■■■□□ 2.03
SPSB3-204ENST00000563741 SLIT1O75093 1534 aa27.7■■■□□ 2.03
SPSB3-204ENST00000563741 ARHGAP23Q9P227 1491 aa27.7■■■□□ 2.02
SPSB3-204ENST00000563741 MED14O60244 1454 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms