RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 NPHP4O75161 1426 aaPredicted RBP13.5□□□□□ -0.25
HERC2-203ENST00000563670 CEP162Q5TB80 1403 aa13.5□□□□□ -0.25
HERC2-203ENST00000563670 ZNF772Q68DY9 489 aaPredicted RBP13.5□□□□□ -0.25
HERC2-203ENST00000563670 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
HERC2-203ENST00000563670 STRCP1A6NGW2 1772 aa13.5□□□□□ -0.25
HERC2-203ENST00000563670 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
HERC2-203ENST00000563670 CDK13Q14004 1512 aaKnown RBP13.49□□□□□ -0.25
HERC2-203ENST00000563670 MYO5CQ9NQX4 1742 aa13.48□□□□□ -0.25
HERC2-203ENST00000563670 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
HERC2-203ENST00000563670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERC2-203ENST00000563670 CLTCQ00610 1675 aaKnown RBP13.47□□□□□ -0.25
HERC2-203ENST00000563670 SETBP1Q9Y6X0 1596 aa13.47□□□□□ -0.25
HERC2-203ENST00000563670 ATP1B4Q9UN42 357 aaPredicted RBP13.47□□□□□ -0.25
HERC2-203ENST00000563670 RXRBP28702 533 aa13.45□□□□□ -0.26
HERC2-203ENST00000563670 JCADQ9P266 1359 aa13.45□□□□□ -0.26
HERC2-203ENST00000563670 IQGAP1P46940 1657 aa13.44□□□□□ -0.26
HERC2-203ENST00000563670 KIDINS220Q9ULH0 1771 aa13.44□□□□□ -0.26
HERC2-203ENST00000563670 ABCC1P33527 1531 aa13.44□□□□□ -0.26
HERC2-203ENST00000563670 ARHGAP5Q13017 1502 aa13.43□□□□□ -0.26
HERC2-203ENST00000563670 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
HERC2-203ENST00000563670 THEMISQ8N1K5 641 aaPredicted RBP13.41□□□□□ -0.26
HERC2-203ENST00000563670 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
HERC2-203ENST00000563670 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
HERC2-203ENST00000563670 LRP6O75581 1613 aa13.4□□□□□ -0.26
HERC2-203ENST00000563670 TNRQ92752 1358 aa13.39□□□□□ -0.27
HERC2-203ENST00000563670 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
HERC2-203ENST00000563670 PLXNC1O60486 1568 aa13.38□□□□□ -0.27
HERC2-203ENST00000563670 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
HERC2-203ENST00000563670 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
HERC2-203ENST00000563670 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
HERC2-203ENST00000563670 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
HERC2-203ENST00000563670 FAM135AQ9P2D6 1515 aa13.36□□□□□ -0.27
HERC2-203ENST00000563670 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
HERC2-203ENST00000563670 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
HERC2-203ENST00000563670 RGS12O14924 1447 aa13.35□□□□□ -0.27
HERC2-203ENST00000563670 LRRIQ1Q96JM4 1722 aa13.35□□□□□ -0.27
HERC2-203ENST00000563670 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
HERC2-203ENST00000563670 UGGT1Q9NYU2 1555 aa13.34□□□□□ -0.27
HERC2-203ENST00000563670 FGD6Q6ZV73 1430 aa13.34□□□□□ -0.27
HERC2-203ENST00000563670 LRP5O75197 1615 aa13.34□□□□□ -0.27
HERC2-203ENST00000563670 CCDC18Q5T9S5 1454 aa13.34□□□□□ -0.27
HERC2-203ENST00000563670 VPS8Q8N3P4 1428 aa13.33□□□□□ -0.28
HERC2-203ENST00000563670 KIF14Q15058 1648 aa13.33□□□□□ -0.28
HERC2-203ENST00000563670 MEX3CQ5U5Q3 659 aaKnown RBP13.33□□□□□ -0.28
HERC2-203ENST00000563670 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
HERC2-203ENST00000563670 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
HERC2-203ENST00000563670 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
HERC2-203ENST00000563670 PHLPP1O60346 1717 aa13.31□□□□□ -0.28
HERC2-203ENST00000563670 APLP2Q06481 763 aa13.31□□□□□ -0.28
HERC2-203ENST00000563670 SAMD9LQ8IVG5 1584 aa13.31□□□□□ -0.28
HERC2-203ENST00000563670 PZPP20742 1482 aa13.3□□□□□ -0.28
HERC2-203ENST00000563670 GGT6Q6P531 493 aa13.3□□□□□ -0.28
HERC2-203ENST00000563670 COL16A1Q07092 1604 aaPredicted RBP13.3□□□□□ -0.28
HERC2-203ENST00000563670 A2MP01023 1474 aa13.29□□□□□ -0.28
HERC2-203ENST00000563670 MIA2Q96PC5 1412 aa13.29□□□□□ -0.28
HERC2-203ENST00000563670 CDC42BPBQ9Y5S2 1711 aa13.28□□□□□ -0.28
HERC2-203ENST00000563670 FBXO31Q5XUX0 539 aaPredicted RBP13.28□□□□□ -0.28
HERC2-203ENST00000563670 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
HERC2-203ENST00000563670 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
HERC2-203ENST00000563670 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
HERC2-203ENST00000563670 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
HERC2-203ENST00000563670 TMEM94Q12767 1356 aa13.27□□□□□ -0.29
HERC2-203ENST00000563670 TROQ12816 1431 aaPredicted RBP13.27□□□□□ -0.29
HERC2-203ENST00000563670 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
HERC2-203ENST00000563670 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
HERC2-203ENST00000563670 PREX2Q70Z35 1606 aa13.25□□□□□ -0.29
HERC2-203ENST00000563670 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
HERC2-203ENST00000563670 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
HERC2-203ENST00000563670 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
HERC2-203ENST00000563670 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
HERC2-203ENST00000563670 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
HERC2-203ENST00000563670 AFF2P51816 1311 aa13.23□□□□□ -0.29
HERC2-203ENST00000563670 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
HERC2-203ENST00000563670 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
HERC2-203ENST00000563670 INO80Q9ULG1 1556 aaPredicted RBP13.22□□□□□ -0.29
HERC2-203ENST00000563670 SCAF11Q99590 1463 aaKnown RBP13.22□□□□□ -0.29
HERC2-203ENST00000563670 EP400Q96L91 3159 aa13.22□□□□□ -0.29
HERC2-203ENST00000563670 YY1P25490 414 aa13.21□□□□□ -0.29
HERC2-203ENST00000563670 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
HERC2-203ENST00000563670 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
HERC2-203ENST00000563670 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
HERC2-203ENST00000563670 ABCC3O15438 1527 aa13.18□□□□□ -0.3
HERC2-203ENST00000563670 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
HERC2-203ENST00000563670 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
HERC2-203ENST00000563670 NGLY1Q96IV0 654 aa13.17□□□□□ -0.3
HERC2-203ENST00000563670 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
HERC2-203ENST00000563670 MSH6P52701 1360 aa13.17□□□□□ -0.3
HERC2-203ENST00000563670 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
HERC2-203ENST00000563670 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
HERC2-203ENST00000563670 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
HERC2-203ENST00000563670 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.3
HERC2-203ENST00000563670 KCNA6P17658 529 aa13.15□□□□□ -0.3
HERC2-203ENST00000563670 SLIT1O75093 1534 aa13.14□□□□□ -0.31
HERC2-203ENST00000563670 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
HERC2-203ENST00000563670 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
HERC2-203ENST00000563670 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
HERC2-203ENST00000563670 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
HERC2-203ENST00000563670 CCNB3Q8WWL7 1395 aa13.13□□□□□ -0.31
HERC2-203ENST00000563670 LTKP29376 864 aa13.13□□□□□ -0.31
HERC2-203ENST00000563670 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms