RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 MROH2AA6NES4 1674 aa23.95■■□□□ 1.43
AC009088.3-201ENST00000563605 DNMT1P26358 1616 aaKnown RBP23.95■■□□□ 1.43
AC009088.3-201ENST00000563605 SHANK2Q9UPX8 1470 aa23.95■■□□□ 1.42
AC009088.3-201ENST00000563605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.95■■□□□ 1.42
AC009088.3-201ENST00000563605 NPATQ14207 1427 aa23.94■■□□□ 1.42
AC009088.3-201ENST00000563605 PTPRKQ15262 1439 aa23.94■■□□□ 1.42
AC009088.3-201ENST00000563605 ANKRD30AQ9BXX3 1397 aa23.94■■□□□ 1.42
AC009088.3-201ENST00000563605 ITGAEP38570 1179 aa23.94■■□□□ 1.42
AC009088.3-201ENST00000563605 DUOX2Q9NRD8 1548 aa23.94■■□□□ 1.42
AC009088.3-201ENST00000563605 CROCC2H7BZ55 1655 aa23.91■■□□□ 1.42
AC009088.3-201ENST00000563605 KDM5DQ9BY66 1539 aa23.9■■□□□ 1.42
AC009088.3-201ENST00000563605 NCOA1Q15788 1441 aa23.89■■□□□ 1.41
AC009088.3-201ENST00000563605 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
AC009088.3-201ENST00000563605 TNRQ92752 1358 aa23.85■■□□□ 1.41
AC009088.3-201ENST00000563605 EIF2AK4Q9P2K8 1649 aaKnown RBP23.84■■□□□ 1.41
AC009088.3-201ENST00000563605 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
AC009088.3-201ENST00000563605 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.41
AC009088.3-201ENST00000563605 PZPP20742 1482 aa23.82■■□□□ 1.4
AC009088.3-201ENST00000563605 ABCC3O15438 1527 aa23.82■■□□□ 1.4
AC009088.3-201ENST00000563605 FAM135AQ9P2D6 1515 aa23.81■■□□□ 1.4
AC009088.3-201ENST00000563605 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
AC009088.3-201ENST00000563605 KANK1Q14678 1352 aa23.8■■□□□ 1.4
AC009088.3-201ENST00000563605 ADGRL2O95490 1459 aa23.8■■□□□ 1.4
AC009088.3-201ENST00000563605 MROH1Q8NDA8 1641 aa23.79■■□□□ 1.4
AC009088.3-201ENST00000563605 CAMSAP1Q5T5Y3 1602 aa23.77■■□□□ 1.4
AC009088.3-201ENST00000563605 MYO3AQ8NEV4 1616 aa23.77■■□□□ 1.4
AC009088.3-201ENST00000563605 ANKRD50Q9ULJ7 1429 aa23.76■■□□□ 1.39
AC009088.3-201ENST00000563605 ILDR1Q86SU0 546 aaPredicted RBP23.76■■□□□ 1.39
AC009088.3-201ENST00000563605 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
AC009088.3-201ENST00000563605 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
AC009088.3-201ENST00000563605 A2ML1A8K2U0 1454 aa23.75■■□□□ 1.39
AC009088.3-201ENST00000563605 CEP152O94986 1710 aa23.73■■□□□ 1.39
AC009088.3-201ENST00000563605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.72■■□□□ 1.39
AC009088.3-201ENST00000563605 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
AC009088.3-201ENST00000563605 ZC3H13Q5T200 1668 aaKnown RBP23.72■■□□□ 1.39
AC009088.3-201ENST00000563605 ROCK1Q13464 1354 aa23.7■■□□□ 1.38
AC009088.3-201ENST00000563605 THEMISQ8N1K5 641 aaPredicted RBP23.7■■□□□ 1.38
AC009088.3-201ENST00000563605 ERVK-7P63135 1459 aa23.69■■□□□ 1.38
AC009088.3-201ENST00000563605 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
AC009088.3-201ENST00000563605 PKD2Q13563 968 aa23.69■■□□□ 1.38
AC009088.3-201ENST00000563605 PTPRTO14522 1441 aa23.68■■□□□ 1.38
AC009088.3-201ENST00000563605 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
AC009088.3-201ENST00000563605 ZNF142P52746 1687 aaPredicted RBP23.67■■□□□ 1.38
AC009088.3-201ENST00000563605 DEPDC5O75140 1603 aa23.67■■□□□ 1.38
AC009088.3-201ENST00000563605 NLRP1Q9C000 1473 aa23.67■■□□□ 1.38
AC009088.3-201ENST00000563605 CERKQ8TCT0 537 aa23.66■■□□□ 1.38
AC009088.3-201ENST00000563605 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
AC009088.3-201ENST00000563605 SPATA31D1Q6ZQQ2 1576 aa23.65■■□□□ 1.38
AC009088.3-201ENST00000563605 ANKLE2Q86XL3 938 aa23.64■■□□□ 1.37
AC009088.3-201ENST00000563605 PLA2R1Q13018 1463 aa23.63■■□□□ 1.37
AC009088.3-201ENST00000563605 UGGT1Q9NYU2 1555 aa23.62■■□□□ 1.37
AC009088.3-201ENST00000563605 STAG3Q9UJ98 1225 aa23.61■■□□□ 1.37
AC009088.3-201ENST00000563605 VWDEQ8N2E2 1590 aa23.61■■□□□ 1.37
AC009088.3-201ENST00000563605 LMTK2Q8IWU2 1503 aa23.6■■□□□ 1.37
AC009088.3-201ENST00000563605 FBXO41Q8TF61 875 aa23.6■■□□□ 1.37
AC009088.3-201ENST00000563605 NUP155O75694 1391 aa23.58■■□□□ 1.37
AC009088.3-201ENST00000563605 IDI1Q13907 227 aa23.58■■□□□ 1.37
AC009088.3-201ENST00000563605 ZNF335Q9H4Z2 1342 aaPredicted RBP23.57■■□□□ 1.36
AC009088.3-201ENST00000563605 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
AC009088.3-201ENST00000563605 TXNDC2Q86VQ3 553 aa23.52■■□□□ 1.36
AC009088.3-201ENST00000563605 UNC13BO14795 1591 aa23.5■■□□□ 1.35
AC009088.3-201ENST00000563605 NOS1P29475 1434 aa23.5■■□□□ 1.35
AC009088.3-201ENST00000563605 LTKP29376 864 aa23.49■■□□□ 1.35
AC009088.3-201ENST00000563605 SLC52A1Q9NWF4 448 aa23.49■■□□□ 1.35
AC009088.3-201ENST00000563605 NPHP4O75161 1426 aaPredicted RBP23.49■■□□□ 1.35
AC009088.3-201ENST00000563605 NAIPQ13075 1403 aa23.49■■□□□ 1.35
AC009088.3-201ENST00000563605 CHGAP10645 457 aaKnown RBP23.48■■□□□ 1.35
AC009088.3-201ENST00000563605 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
AC009088.3-201ENST00000563605 EID1Q9Y6B2 187 aa23.48■■□□□ 1.35
AC009088.3-201ENST00000563605 SYNMO15061 1565 aa23.47■■□□□ 1.35
AC009088.3-201ENST00000563605 PIK3C2BO00750 1634 aa23.46■■□□□ 1.35
AC009088.3-201ENST00000563605 TET3O43151 1660 aa23.46■■□□□ 1.35
AC009088.3-201ENST00000563605 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
AC009088.3-201ENST00000563605 UBR1Q8IWV7 1749 aa23.46■■□□□ 1.35
AC009088.3-201ENST00000563605 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
AC009088.3-201ENST00000563605 NEURL4Q96JN8 1562 aa23.46■■□□□ 1.35
AC009088.3-201ENST00000563605 POLR1AO95602 1720 aaPredicted RBP23.45■■□□□ 1.34
AC009088.3-201ENST00000563605 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
AC009088.3-201ENST00000563605 TMEM2Q9UHN6 1383 aa23.43■■□□□ 1.34
AC009088.3-201ENST00000563605 IQGAP3Q86VI3 1631 aa23.42■■□□□ 1.34
AC009088.3-201ENST00000563605 MED14O60244 1454 aa23.42■■□□□ 1.34
AC009088.3-201ENST00000563605 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
AC009088.3-201ENST00000563605 BCANQ96GW7 911 aa23.4■■□□□ 1.34
AC009088.3-201ENST00000563605 GCC2Q8IWJ2 1684 aa23.4■■□□□ 1.34
AC009088.3-201ENST00000563605 HFM1A2PYH4 1435 aa23.4■■□□□ 1.34
AC009088.3-201ENST00000563605 ARHGAP23Q9P227 1491 aa23.39■■□□□ 1.34
AC009088.3-201ENST00000563605 E9PCH4 1651 aa23.38■■□□□ 1.33
AC009088.3-201ENST00000563605 SLIT1O75093 1534 aa23.38■■□□□ 1.33
AC009088.3-201ENST00000563605 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
AC009088.3-201ENST00000563605 ADGRB3O60242 1522 aa23.34■■□□□ 1.33
AC009088.3-201ENST00000563605 PPP1R15AO75807 674 aaPredicted RBP23.34■■□□□ 1.33
AC009088.3-201ENST00000563605 NUTM2DQ5VT03 806 aaPredicted RBP23.34■■□□□ 1.33
AC009088.3-201ENST00000563605 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
AC009088.3-201ENST00000563605 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
AC009088.3-201ENST00000563605 UBAP1LF5GYI3 381 aa23.32■■□□□ 1.32
AC009088.3-201ENST00000563605 HDGFP51858 240 aaKnown RBP23.32■■□□□ 1.32
AC009088.3-201ENST00000563605 RIMS2Q9UQ26 1411 aa23.29■■□□□ 1.32
AC009088.3-201ENST00000563605 KDM5AP29375 1690 aaKnown RBP23.28■■□□□ 1.32
AC009088.3-201ENST00000563605 FOXD1Q16676 465 aa23.27■■□□□ 1.32
AC009088.3-201ENST00000563605 ZNF326Q5BKZ1 582 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms