RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 RAB3GAP2Q9H2M9 1393 aa28.01■■■□□ 2.07
FANCA-212ENST00000563513 MROH1Q8NDA8 1641 aa28.01■■■□□ 2.07
FANCA-212ENST00000563513 DEPDC5O75140 1603 aa27.99■■■□□ 2.07
FANCA-212ENST00000563513 HRCP23327 699 aa27.97■■■□□ 2.07
FANCA-212ENST00000563513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.97■■■□□ 2.075e-9■□□□□ 10.5
FANCA-212ENST00000563513 PPP6R1Q9UPN7 881 aa27.96■■■□□ 2.07
FANCA-212ENST00000563513 UNC13BO14795 1591 aa27.94■■■□□ 2.06
FANCA-212ENST00000563513 PRDM15P57071 1507 aaPredicted RBP27.94■■■□□ 2.06
FANCA-212ENST00000563513 ADAMTSL3P82987 1691 aa27.94■■■□□ 2.06
FANCA-212ENST00000563513 VWDEQ8N2E2 1590 aa27.92■■■□□ 2.06
FANCA-212ENST00000563513 NUP155O75694 1391 aa27.91■■■□□ 2.06
FANCA-212ENST00000563513 KDM4FA0A1W2PPD8 638 aa27.91■■■□□ 2.06
FANCA-212ENST00000563513 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
FANCA-212ENST00000563513 WASHC2CQ9Y4E1 1318 aa27.9■■■□□ 2.06
FANCA-212ENST00000563513 TRIM52Q96A61 297 aa27.88■■■□□ 2.05
FANCA-212ENST00000563513 ABCC3O15438 1527 aa27.87■■■□□ 2.05
FANCA-212ENST00000563513 KANK1Q14678 1352 aa27.86■■■□□ 2.05
FANCA-212ENST00000563513 MADDQ8WXG6 1647 aa27.86■■■□□ 2.05
FANCA-212ENST00000563513 LMTK2Q8IWU2 1503 aa27.84■■■□□ 2.05
FANCA-212ENST00000563513 FAM135AQ9P2D6 1515 aa27.84■■■□□ 2.05
FANCA-212ENST00000563513 ACIN1Q9UKV3 1341 aaKnown RBP27.84■■■□□ 2.05
FANCA-212ENST00000563513 IQGAP3Q86VI3 1631 aa27.83■■■□□ 2.05
FANCA-212ENST00000563513 FER1L4A9Z1Z3 1794 aa27.83■■■□□ 2.05
FANCA-212ENST00000563513 PZPP20742 1482 aa27.83■■■□□ 2.04
FANCA-212ENST00000563513 CLTCQ00610 1675 aaKnown RBP27.82■■■□□ 2.04
FANCA-212ENST00000563513 CEP152O94986 1710 aa27.82■■■□□ 2.04
FANCA-212ENST00000563513 CNTLNQ9NXG0 1405 aa27.82■■■□□ 2.04
FANCA-212ENST00000563513 ESF1Q9H501 851 aaKnown RBP27.81■■■□□ 2.04
FANCA-212ENST00000563513 ZMYM3Q14202 1370 aa27.8■■■□□ 2.04
FANCA-212ENST00000563513 ZC3H13Q5T200 1668 aaKnown RBP27.79■■■□□ 2.04
FANCA-212ENST00000563513 MPHOSPH9Q99550 1183 aa27.77■■■□□ 2.04
FANCA-212ENST00000563513 RIMS1Q86UR5 1692 aaKnown RBP27.77■■■□□ 2.04
FANCA-212ENST00000563513 CEBPAP49715 358 aaPredicted RBP27.75■■■□□ 2.03
FANCA-212ENST00000563513 SLC4A1APQ9BWU0 796 aaKnown RBP27.75■■■□□ 2.03
FANCA-212ENST00000563513 ARHGAP31Q2M1Z3 1444 aa27.75■■■□□ 2.03
FANCA-212ENST00000563513 CAMSAP1Q5T5Y3 1602 aa27.74■■■□□ 2.03
FANCA-212ENST00000563513 MROH2AA6NES4 1674 aa27.74■■■□□ 2.03
FANCA-212ENST00000563513 TET3O43151 1660 aa27.74■■■□□ 2.03
FANCA-212ENST00000563513 EFCAB6Q5THR3 1501 aa27.72■■■□□ 2.03
FANCA-212ENST00000563513 PTPRMP28827 1452 aa27.72■■■□□ 2.03
FANCA-212ENST00000563513 NPATQ14207 1427 aa27.72■■■□□ 2.03
FANCA-212ENST00000563513 PKD2Q13563 968 aa27.7■■■□□ 2.02
FANCA-212ENST00000563513 FBXO31Q5XUX0 539 aaPredicted RBP27.7■■■□□ 2.02
FANCA-212ENST00000563513 C3P01024 1663 aa27.69■■■□□ 2.02
FANCA-212ENST00000563513 E9PCH4 1651 aa27.68■■■□□ 2.02
FANCA-212ENST00000563513 FOXD1Q16676 465 aa27.66■■■□□ 2.02
FANCA-212ENST00000563513 PLPPR3Q6T4P5 718 aa27.65■■■□□ 2.02
FANCA-212ENST00000563513 RPRD2Q5VT52 1461 aaKnown RBP27.64■■■□□ 2.02
FANCA-212ENST00000563513 DHX57Q6P158 1386 aaKnown RBP27.62■■■□□ 2.01
FANCA-212ENST00000563513 CFAP65Q6ZU64 1925 aaKnown RBP27.62■■■□□ 2.01
FANCA-212ENST00000563513 NOS1P29475 1434 aa27.61■■■□□ 2.01
FANCA-212ENST00000563513 ERVK-7P63135 1459 aa27.6■■■□□ 2.01
FANCA-212ENST00000563513 PTPRTO14522 1441 aa27.59■■■□□ 2.01
FANCA-212ENST00000563513 PLA2R1Q13018 1463 aa27.59■■■□□ 2.01
FANCA-212ENST00000563513 SPATA31D1Q6ZQQ2 1576 aa27.59■■■□□ 2.01
FANCA-212ENST00000563513 PREX1Q8TCU6 1659 aa27.58■■■□□ 2.01
FANCA-212ENST00000563513 SYNMO15061 1565 aa27.53■■■□□ 2
FANCA-212ENST00000563513 TNRQ92752 1358 aa27.53■■■□□ 2
FANCA-212ENST00000563513 ANKRD30BQ9BXX2 1392 aa27.52■■■□□ 2
FANCA-212ENST00000563513 SPHKAPQ2M3C7 1700 aa27.5■■□□□ 1.99
FANCA-212ENST00000563513 SETD1BQ9UPS6 1966 aaKnown RBP27.48■■□□□ 1.99
FANCA-212ENST00000563513 IDI1Q13907 227 aa27.48■■□□□ 1.99
FANCA-212ENST00000563513 TRPM2O94759 1503 aa27.47■■□□□ 1.99
FANCA-212ENST00000563513 SLC52A1Q9NWF4 448 aa27.47■■□□□ 1.99
FANCA-212ENST00000563513 UGGT1Q9NYU2 1555 aa27.47■■□□□ 1.99
FANCA-212ENST00000563513 PIK3C2BO00750 1634 aa27.43■■□□□ 1.98
FANCA-212ENST00000563513 NLRP1Q9C000 1473 aa27.41■■□□□ 1.98
FANCA-212ENST00000563513 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
FANCA-212ENST00000563513 MYO3AQ8NEV4 1616 aa27.39■■□□□ 1.98
FANCA-212ENST00000563513 CCDC144AA2RUR9 1427 aa27.38■■□□□ 1.97
FANCA-212ENST00000563513 SIN3AQ96ST3 1273 aa27.37■■□□□ 1.97
FANCA-212ENST00000563513 A2ML1A8K2U0 1454 aa27.36■■□□□ 1.97
FANCA-212ENST00000563513 UHRF1BP1Q6BDS2 1440 aa27.35■■□□□ 1.97
FANCA-212ENST00000563513 CCER1Q8TC90 406 aaPredicted RBP27.34■■□□□ 1.97
FANCA-212ENST00000563513 CEP170BQ9Y4F5 1589 aaPredicted RBP27.34■■□□□ 1.97
FANCA-212ENST00000563513 TMEM131LA2VDJ0 1609 aa27.3■■□□□ 1.96
FANCA-212ENST00000563513 ZNF142P52746 1687 aaPredicted RBP27.3■■□□□ 1.96
FANCA-212ENST00000563513 CHGAP10645 457 aaKnown RBP27.3■■□□□ 1.96
FANCA-212ENST00000563513 SPATA31E1Q6ZUB1 1445 aa27.3■■□□□ 1.96
FANCA-212ENST00000563513 LMTK3Q96Q04 1460 aa27.3■■□□□ 1.96
FANCA-212ENST00000563513 CLSPNQ9HAW4 1339 aa27.29■■□□□ 1.96
FANCA-212ENST00000563513 ADGRB3O60242 1522 aa27.29■■□□□ 1.96
FANCA-212ENST00000563513 UBR1Q8IWV7 1749 aa27.29■■□□□ 1.96
FANCA-212ENST00000563513 STAG3Q9UJ98 1225 aa27.28■■□□□ 1.96
FANCA-212ENST00000563513 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
FANCA-212ENST00000563513 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
FANCA-212ENST00000563513 NEUROD1Q13562 356 aa27.26■■□□□ 1.95
FANCA-212ENST00000563513 THEMISQ8N1K5 641 aaPredicted RBP27.26■■□□□ 1.95
FANCA-212ENST00000563513 KIF1BO60333 1816 aa27.25■■□□□ 1.95
FANCA-212ENST00000563513 MYO5BQ9ULV0 1848 aa27.24■■□□□ 1.95
FANCA-212ENST00000563513 NEURL4Q96JN8 1562 aa27.22■■□□□ 1.95
FANCA-212ENST00000563513 HSPA2P54652 639 aa27.22■■□□□ 1.95
FANCA-212ENST00000563513 RGL3Q3MIN7 710 aa27.22■■□□□ 1.95
FANCA-212ENST00000563513 TMEM2Q9UHN6 1383 aa27.21■■□□□ 1.95
FANCA-212ENST00000563513 ARHGAP23Q9P227 1491 aa27.19■■□□□ 1.94
FANCA-212ENST00000563513 SLIT1O75093 1534 aa27.18■■□□□ 1.94
FANCA-212ENST00000563513 ZNF326Q5BKZ1 582 aaKnown RBP27.18■■□□□ 1.94
FANCA-212ENST00000563513 ZFYVE9O95405 1425 aa27.16■■□□□ 1.94
FANCA-212ENST00000563513 RPGRIP1LQ68CZ1 1315 aa27.16■■□□□ 1.94
FANCA-212ENST00000563513 LTKP29376 864 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms