RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 IQGAP3Q86VI3 1631 aa14.98□□□□□ -0.01
SMG1-208ENST00000563448 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
SMG1-208ENST00000563448 MROH1Q8NDA8 1641 aa14.96□□□□□ -0.01
SMG1-208ENST00000563448 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
SMG1-208ENST00000563448 MPHOSPH9Q99550 1183 aa14.96□□□□□ -0.01
SMG1-208ENST00000563448 NUP155O75694 1391 aa14.96□□□□□ -0.01
SMG1-208ENST00000563448 SIGLEC1Q9BZZ2 1709 aa14.95□□□□□ -0.02
SMG1-208ENST00000563448 FAM135AQ9P2D6 1515 aa14.95□□□□□ -0.02
SMG1-208ENST00000563448 ARHGEF40Q8TER5 1519 aa14.94□□□□□ -0.02
SMG1-208ENST00000563448 REREQ9P2R6 1566 aa14.94□□□□□ -0.02
SMG1-208ENST00000563448 ATP10AO60312 1499 aa14.93□□□□□ -0.02
SMG1-208ENST00000563448 PRDM15P57071 1507 aaPredicted RBP14.93□□□□□ -0.02
SMG1-208ENST00000563448 CEP152O94986 1710 aa14.93□□□□□ -0.02
SMG1-208ENST00000563448 VWDEQ8N2E2 1590 aa14.93□□□□□ -0.02
SMG1-208ENST00000563448 ZEB1P37275 1124 aaPredicted RBP14.92□□□□□ -0.02
SMG1-208ENST00000563448 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
SMG1-208ENST00000563448 KIF3BO15066 747 aa14.92□□□□□ -0.02
SMG1-208ENST00000563448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.021e-7■□□□□ 11.3
SMG1-208ENST00000563448 TET3O43151 1660 aa14.9□□□□□ -0.02
SMG1-208ENST00000563448 E9PCH4 1651 aa14.9□□□□□ -0.02
SMG1-208ENST00000563448 FOXD1Q16676 465 aa14.89□□□□□ -0.03
SMG1-208ENST00000563448 AGLP35573 1532 aa14.88□□□□□ -0.03
SMG1-208ENST00000563448 PKD2Q13563 968 aa14.87□□□□□ -0.03
SMG1-208ENST00000563448 SIN3AQ96ST3 1273 aa14.87□□□□□ -0.03
SMG1-208ENST00000563448 CFAP65Q6ZU64 1925 aaKnown RBP14.86□□□□□ -0.03
SMG1-208ENST00000563448 ANKRD30BQ9BXX2 1392 aa14.86□□□□□ -0.03
SMG1-208ENST00000563448 ZC3H13Q5T200 1668 aaKnown RBP14.86□□□□□ -0.03
SMG1-208ENST00000563448 KANK1Q14678 1352 aa14.85□□□□□ -0.03
SMG1-208ENST00000563448 LMTK2Q8IWU2 1503 aa14.84□□□□□ -0.03
SMG1-208ENST00000563448 SPHKAPQ2M3C7 1700 aa14.84□□□□□ -0.03
SMG1-208ENST00000563448 CAMSAP1Q5T5Y3 1602 aa14.84□□□□□ -0.03
SMG1-208ENST00000563448 GGT6Q6P531 493 aa14.83□□□□□ -0.03
SMG1-208ENST00000563448 ABCC3O15438 1527 aa14.82□□□□□ -0.04
SMG1-208ENST00000563448 EFCAB6Q5THR3 1501 aa14.82□□□□□ -0.04
SMG1-208ENST00000563448 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
SMG1-208ENST00000563448 CLTCQ00610 1675 aaKnown RBP14.8□□□□□ -0.04
SMG1-208ENST00000563448 PLA2R1Q13018 1463 aa14.79□□□□□ -0.04
SMG1-208ENST00000563448 RPRD2Q5VT52 1461 aaKnown RBP14.79□□□□□ -0.04
SMG1-208ENST00000563448 WASHC2CQ9Y4E1 1318 aa14.77□□□□□ -0.05
SMG1-208ENST00000563448 TRPM2O94759 1503 aa14.76□□□□□ -0.05
SMG1-208ENST00000563448 PTPRTO14522 1441 aa14.75□□□□□ -0.05
SMG1-208ENST00000563448 PREX1Q8TCU6 1659 aa14.74□□□□□ -0.05
SMG1-208ENST00000563448 CLTCL1P53675 1640 aa14.74□□□□□ -0.05
SMG1-208ENST00000563448 TIMELESSQ9UNS1 1208 aa14.74□□□□□ -0.05
SMG1-208ENST00000563448 NPATQ14207 1427 aa14.74□□□□□ -0.05
SMG1-208ENST00000563448 KIF1BO60333 1816 aa14.74□□□□□ -0.05
SMG1-208ENST00000563448 MLECQ14165 292 aa14.73□□□□□ -0.05
SMG1-208ENST00000563448 TONSLQ96HA7 1378 aa14.73□□□□□ -0.05
SMG1-208ENST00000563448 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
SMG1-208ENST00000563448 FER1L4A9Z1Z3 1794 aa14.73□□□□□ -0.05
SMG1-208ENST00000563448 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
SMG1-208ENST00000563448 ARHGAP31Q2M1Z3 1444 aa14.72□□□□□ -0.05
SMG1-208ENST00000563448 CCDC144AA2RUR9 1427 aa14.71□□□□□ -0.05
SMG1-208ENST00000563448 MROH2AA6NES4 1674 aa14.71□□□□□ -0.05
SMG1-208ENST00000563448 SYNMO15061 1565 aa14.69□□□□□ -0.06
SMG1-208ENST00000563448 UGGT1Q9NYU2 1555 aa14.69□□□□□ -0.06
SMG1-208ENST00000563448 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
SMG1-208ENST00000563448 NOS1P29475 1434 aa14.68□□□□□ -0.06
SMG1-208ENST00000563448 L3MBTL2Q969R5 705 aa14.67□□□□□ -0.06
SMG1-208ENST00000563448 CNTLNQ9NXG0 1405 aa14.67□□□□□ -0.06
SMG1-208ENST00000563448 MYO5BQ9ULV0 1848 aa14.67□□□□□ -0.06
SMG1-208ENST00000563448 PPP1R15AO75807 674 aaPredicted RBP14.66□□□□□ -0.06
SMG1-208ENST00000563448 C3P01024 1663 aa14.66□□□□□ -0.06
SMG1-208ENST00000563448 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
SMG1-208ENST00000563448 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
SMG1-208ENST00000563448 ADAMTSL3P82987 1691 aa14.64□□□□□ -0.07
SMG1-208ENST00000563448 IFT172Q9UG01 1749 aa14.64□□□□□ -0.07
SMG1-208ENST00000563448 SPATA31E1Q6ZUB1 1445 aa14.64□□□□□ -0.07
SMG1-208ENST00000563448 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
SMG1-208ENST00000563448 MADDQ8WXG6 1647 aa14.63□□□□□ -0.07
SMG1-208ENST00000563448 RIMS1Q86UR5 1692 aaKnown RBP14.63□□□□□ -0.07
SMG1-208ENST00000563448 ESF1Q9H501 851 aaKnown RBP14.63□□□□□ -0.07
SMG1-208ENST00000563448 ZMYM3Q14202 1370 aa14.63□□□□□ -0.07
SMG1-208ENST00000563448 FBXO31Q5XUX0 539 aaPredicted RBP14.62□□□□□ -0.07
SMG1-208ENST00000563448 ADGRB3O60242 1522 aa14.61□□□□□ -0.07
SMG1-208ENST00000563448 PPLO60437 1756 aa14.6□□□□□ -0.07
SMG1-208ENST00000563448 RGL3Q3MIN7 710 aa14.59□□□□□ -0.07
SMG1-208ENST00000563448 TMEM131LA2VDJ0 1609 aa14.58□□□□□ -0.07
SMG1-208ENST00000563448 NBPF8Q3BBV2 869 aa14.57□□□□□ -0.08
SMG1-208ENST00000563448 DCAF11Q8TEB1 546 aa14.57□□□□□ -0.08
SMG1-208ENST00000563448 IDI1Q13907 227 aa14.56□□□□□ -0.08
SMG1-208ENST00000563448 UHRF1BP1Q6BDS2 1440 aa14.56□□□□□ -0.08
SMG1-208ENST00000563448 SLC52A1Q9NWF4 448 aa14.56□□□□□ -0.08
SMG1-208ENST00000563448 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
SMG1-208ENST00000563448 KDM2AQ9Y2K7 1162 aa14.55□□□□□ -0.08
SMG1-208ENST00000563448 CEBPAP49715 358 aaPredicted RBP14.54□□□□□ -0.08
SMG1-208ENST00000563448 CHGAP10645 457 aaKnown RBP14.53□□□□□ -0.08
SMG1-208ENST00000563448 KDM5AP29375 1690 aaKnown RBP14.53□□□□□ -0.08
SMG1-208ENST00000563448 UBR1Q8IWV7 1749 aa14.53□□□□□ -0.08
SMG1-208ENST00000563448 PRAG1Q86YV5 1406 aa14.52□□□□□ -0.08
SMG1-208ENST00000563448 TNRQ92752 1358 aa14.52□□□□□ -0.09
SMG1-208ENST00000563448 NEXMIFQ5QGS0 1516 aa14.52□□□□□ -0.09
SMG1-208ENST00000563448 ZNF326Q5BKZ1 582 aaKnown RBP14.51□□□□□ -0.09
SMG1-208ENST00000563448 MYOM2P54296 1465 aa14.5□□□□□ -0.09
SMG1-208ENST00000563448 KIAA1210Q9ULL0 1709 aa14.5□□□□□ -0.09
SMG1-208ENST00000563448 MYO3AQ8NEV4 1616 aa14.5□□□□□ -0.09
SMG1-208ENST00000563448 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
SMG1-208ENST00000563448 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
SMG1-208ENST00000563448 A2ML1A8K2U0 1454 aa14.48□□□□□ -0.09
SMG1-208ENST00000563448 PLPPR3Q6T4P5 718 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms